Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Attributions Wiki
XB-GRNA-29231033
gRNA Name: gnat1 gRNA1
Synonyms:
Genomic Target: gnat1

Sequence: 5' ATGGAAAGACACGGGTATCC 3'



Genomic Target tropicalis laevis.L laevis.S
Identities 20/20 20/20 20/20
genome
gRNA
 
5' GGATACCCGTGTCTTTCCAT 3'
   ||||||||||||||||||||
3' CCTATGGGCACAGAAAGGTA 5'
 
5' GGATACCCGTGTCTTTCCAT 3'
   ||||||||||||||||||||
3' CCTATGGGCACAGAAAGGTA 5'
 
5' GGATACCCGTGTCTTTCCAT 3'
   ||||||||||||||||||||
3' CCTATGGGCACAGAAAGGTA 5'
    
Genomic Alignments Position Identity Strand Target Genomic Target
laevis 10.1 Chr4L:125699432..125699451 20/20 Sense target gnat1.L
Chr4S:105664543..105664562 20/20 Sense target gnat1.S
Chr9_10L:135895884..135895903 17/20 Sense off-target prodh2.L
tropicalis 10.0 Chr4:126826645..126826664 20/20 Sense target gnat1
Chr3:89143396..89143415 19/20 Antisense off-target gcc1
Chr7:40328988..40329007 18/20 Antisense off-target dna2
Chr7:40328593..40328612 18/20 Antisense off-target dna2
Chr5:63109730..63109749 18/20 Sense off-target txlnb
Chr10:19440134..19440153 18/20 Sense off-target ifi35
Chr4:63142223..63142242 18/20 Sense off-target cdh13
Chr2:64456622..64456641 18/20 Antisense off-target dennd2d
Chr3:63764962..63764981 18/20 Antisense off-target slc38a1
Chr3:94507056..94507075 18/20 Antisense off-target csnk1g1
Chr5:158069156..158069175 18/20 Sense off-target LOC116411029
Chr8:88160265..88160284 17/20 Antisense off-target otub2
Chr10:9534551..9534570 17/20 Sense off-target lrrc3c
Chr10:9534624..9534643 17/20 Sense off-target lrrc3c
Chr10:9534697..9534716 17/20 Sense off-target lrrc3c
Chr8:106847016..106847035 16/20 Sense off-target sipa1l1
Chr7:67555350..67555369 18/20 Sense unknown
Chr5:30646591..30646610 18/20 Antisense unknown
Chr1:173245879..173245898 18/20 Antisense unknown
Chr1:174196564..174196583 18/20 Sense unknown
Chr1:4279569..4279588 18/20 Sense unknown
Chr1:49705901..49705920 18/20 Antisense unknown
Chr3:148144251..148144270 18/20 Sense unknown
Chr3:148281003..148281022 18/20 Antisense unknown
Chr4:58358795..58358814 18/20 Antisense unknown
Chr5:155693413..155693432 18/20 Antisense unknown
Chr7:55404673..55404692 17/20 Antisense unknown
Chr8:87766242..87766261 17/20 Antisense unknown
Chr2:89271545..89271564 17/20 Antisense unknown
Chr5:34089922..34089941 16/20 Antisense unknown
Publications
???morpholino.displaySummary.papersFirst??? Synchronized photoactivation of T4K rhodopsin causes a chromophore-dependent retinal degeneration that is moderated by interaction with phototransduction cascade components., J Neurosci 2024     
???morpholino.displaySummary.papersRecent???
???morpholino.displaySummary.papersAll???