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XB-GRNA-25900333
gRNA Name:
itgb4 gRNA1
Synonyms: Xt.itgb4 gRNA
Genomic Target: itgb4
Sequence: 5' AAACACATTCAGGTCAAATG 3'
Synonyms: Xt.itgb4 gRNA
Genomic Target: itgb4
Sequence: 5' AAACACATTCAGGTCAAATG 3'
| Genomic Target | tropicalis | ||||||
| Identities | 20/20 | ||||||
genome
gRNA
|
5' CATTTGACCTGAATGTGTTT 3' |||||||||||||||||||| 3' GTAAACTGGACTTACACAAA 5' |
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| Genomic Alignments |
Position | Identity | Strand | Target | Genomic Target | ||
| laevis 10.1 | Chr4L:38673774..38673793 | 19/20 | Sense | off-target | znf423.L | ||
| Chr6L:44485258..44485277 | 18/20 | Antisense | off-target | cpvl.L | |||
| Chr6L:24663315..24663334 | 18/20 | Antisense | off-target | myo3a.L | |||
| Chr9_10S:29663646..29663665 | 18/20 | Sense | off-target | rbfox3.S | |||
| Chr9_10L:33277132..33277151 | 18/20 | Antisense | off-target | LOC108701017 | |||
| Chr2L:25082720..25082739 | 17/20 | Sense | off-target | robo2.L | |||
| Chr7S:17027013..17027032 | 17/20 | Sense | off-target | adgra1.S | |||
| Chr2S:120261270..120261289 | 17/20 | Sense | off-target | LOC108709778 | |||
| Chr2L:115526224..115526243 | 19/20 | Antisense | unknown | ||||
| Chr1S:197217618..197217637 | 18/20 | Antisense | unknown | ||||
| Chr8S:88399491..88399510 | 18/20 | Antisense | unknown | ||||
| Chr8S:88703454..88703473 | 18/20 | Antisense | unknown | ||||
| Chr6S:69537565..69537584 | 17/20 | Antisense | unknown | ||||
| Chr4L:58534230..58534249 | 17/20 | Sense | unknown | ||||
| Chr6L:82299633..82299652 | 16/20 | Sense | unknown | tropicalis 10.0 | Chr10:44741214..44741233 | 20/20 | Antisense | target | itgb4 |
| Chr7:90356267..90356286 | 17/20 | Antisense | off-target | plch2 | |||
| Chr3:47250801..47250820 | 17/20 | Sense | unknown | ||||
| Publications | |||||||
| ???morpholino.displaySummary.papersFirst??? |
Identification and validation of candidate risk genes in endocytic vesicular trafficking associated with esophageal atresia and tracheoesophageal fistulas., HGG Adv 2022 |
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| ???morpholino.displaySummary.papersRecent??? |
Disrupted endosomal trafficking of the Vangl-Celsr polarity complex underlies congenital anomalies in Xenopus trachea-esophageal morphogenesis., Dev Cell 2025 |
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| ???morpholino.displaySummary.papersAll??? | |||||||
