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XB-GRNA-23659098
gRNA Name:
adprhl1 gRNA12
Synonyms: -e7-2L
Genomic Target: adprhl1
PAM Sequence: TGG
Sequence: 5' GGTGTCTGTATGGATTGCTCTA 3'
Synonyms: -e7-2L
Genomic Target: adprhl1
PAM Sequence: TGG
Sequence: 5' GGTGTCTGTATGGATTGCTCTA 3'
| Genomic Target | tropicalis | laevis.L | laevis.S | ||||
| Identities | 21/22 | 22/22 | 21/22 | ||||
genome
gRNA
|
5' TAGAGCAATCCATAAAGACACC 3'
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3' ATCTCGTTAGGTATGTCTGTGG 5' |
5' TAGAGCAATCCATACAGACACC 3' |||||||||||||||||||||| 3' ATCTCGTTAGGTATGTCTGTGG 5' |
5' TAGAGCAATCCATAAAGACACC 3'
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3' ATCTCGTTAGGTATGTCTGTGG 5' |
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| Genomic Alignments |
Position | Identity | Strand | Target | Genomic Target | ||
| laevis 10.1 | Chr2L:120477625..120477646 | 22/22 | Sense | target | adprhl1.L | ||
| Chr2S:106633829..106633850 | 21/22 | Sense | target | adprhl1.S | |||
| Chr3S:56522219..56522240 | 20/22 | Antisense | off-target | fam189a1.S | |||
| Chr4L:85913780..85913801 | 20/22 | Sense | off-target | LOC108714274 | |||
| Chr9_10S:11463934..11463955 | 19/22 | Sense | off-target | dok5.S | |||
| Chr4S:91610904..91610925 | 19/22 | Antisense | off-target | kcnt2.S | |||
| Chr9_10L:82593470..82593491 | 19/22 | Sense | off-target | LOC108701415 | |||
| Chr1L:108559285..108559306 | 18/22 | Sense | off-target | efna2.L | |||
| Chr1S:151892778..151892799 | 18/22 | Sense | off-target | hectd4.S | |||
| Chr7L:37673141..37673162 | 18/22 | Antisense | off-target | marchf8.L | |||
| Chr7S:29324339..29324360 | 18/22 | Antisense | off-target | marchf8.S | |||
| Chr5L:61912934..61912955 | 19/22 | Antisense | unknown | ||||
| Chr6L:68425017..68425038 | 19/22 | Sense | unknown | ||||
| Chr3S:34924707..34924728 | 19/22 | Antisense | unknown | ||||
| Chr3S:99915715..99915736 | 19/22 | Antisense | unknown | ||||
| Chr6L:97411584..97411605 | 18/22 | Antisense | unknown | ||||
| Chr3S:24168609..24168630 | 18/22 | Sense | unknown | tropicalis 10.0 | Chr2:115908706..115908727 | 21/22 | Sense | target | adprhl1 |
| Chr4:262136..262157 | 18/22 | Sense | off-target | LOC101734942 | |||
| Chr4:283729..283750 | 18/22 | Sense | off-target | LOC101734942 | |||
| Chr9:23206880..23206901 | 18/22 | Sense | off-target | LOC116407726 | |||
| Chr2:11674300..11674321 | 19/22 | Sense | unknown | ||||
| Chr3:64613910..64613931 | 19/22 | Antisense | unknown | ||||
| Chr4:54584431..54584452 | 19/22 | Antisense | unknown | ||||
| Chr8:11944011..11944032 | 19/22 | Sense | unknown | ||||
| Publications | |||||||
| ???morpholino.displaySummary.papersFirst??? |
Defective heart chamber growth and myofibrillogenesis after knockout of adprhl1 gene function by targeted disruption of the ancestral catalytic active site., PLoS One 2020 |
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| ???morpholino.displaySummary.papersRecent??? | |||||||
| ???morpholino.displaySummary.papersAll??? | |||||||
