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Summary Attributions Wiki
XB-MORPHOLINO-17250082
Morpholino Name: pcdh8l MO2
Synonyms: PCNS M2
Target mRNA: pcdh8l

Morpholino Type: uncategorized morpholino
Sequence: 5' AAGTTGCACTAACAAAGTTGCTGTG 3'

Source: Gene Tools LLC


Target mRNA tropicalis laevis.L laevis.S
Identities 22/25 23/25 25/25
genome
MO
 
5' CACAGCAACTTTGTTGGAGGAACTT 3'
   ||||||||||||||| | | |||||
3' GTGTCGTTGAAACAATCACGTTGAA 5'
 
5' CACAGCAACTTTTTTGGTGCAACTT 3'
   |||||||||||| || |||||||||
3' GTGTCGTTGAAACAATCACGTTGAA 5'
 
5' CACAGCAACTTTGTTAGTGCAACTT 3'
   |||||||||||||||||||||||||
3' GTGTCGTTGAAACAATCACGTTGAA 5'
    
Genomic Alignments Position Identity Strand Target Target mRNA
laevis 10.1 Chr7S:25733068..25733092 25/25 Antisense target pcdh8l.S
Chr7L:31914510..31914534 23/25 Sense target pcdh8l.L
Chr5L:131408596..131408620 22/25 Sense off-target clstn2.L
Chr8L:21564164..21564188 21/25 Antisense unknown
Chr6L:144177305..144177329 21/25 Antisense unknown
Chr6S:122527651..122527675 21/25 Antisense unknown
Chr7L:24487664..24487688 21/25 Sense unknown
tropicalis 10.0 Chr7:35769060..35769084 22/25 Sense target pcdh8l
Chr3:62202181..62202205 21/25 Antisense off-target syt1
Chr7:34682502..34682526 21/25 Sense off-target loxl4
Chr4:51007912..51007936 21/25 Antisense unknown
Chr6:110774688..110774712 21/25 Antisense unknown
Publications
???morpholino.displaySummary.papersFirst??? PCNS: a novel protocadherin required for cranial neural crest migration and somite morphogenesis in Xenopus., Dev Biol 2006     
???morpholino.displaySummary.papersRecent??? Dual control of pcdh8l/PCNS expression and function in Xenopus laevis neural crest cells by adam13/33 via the transcription factors tfap2α and arid3a., Elife 2017     
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