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XB-MORPHOLINO-17249553
Morpholino Name:
foxi1 MO9
Synonyms: foxi1e
Target mRNA: foxi1
Morpholino Type: uncategorized morpholino
Sequence: 5' CTTTTATCTGGGGCTCCATG 3'
Source: Gene Tools LLC
Synonyms: foxi1e
Target mRNA: foxi1
Morpholino Type: uncategorized morpholino
Sequence: 5' CTTTTATCTGGGGCTCCATG 3'
Source: Gene Tools LLC
| Target mRNA | tropicalis | laevis.L | laevis.S | ||||
| Identities | 20/20 | 20/20 | 20/20 | ||||
genome
MO
|
5' CATGGAGCCCCAGATAAAAG 3' |||||||||||||||||||| 3' GTACCTCGGGGTCTATTTTC 5' |
5' CATGGAGCCCCAGATAAAAG 3' |||||||||||||||||||| 3' GTACCTCGGGGTCTATTTTC 5' |
5' CATGGAGCCCCAGATAAAAG 3' |||||||||||||||||||| 3' GTACCTCGGGGTCTATTTTC 5' |
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| Genomic Alignments |
Position | Identity | Strand | Target | Target mRNA | ||
| laevis 10.1 | Chr3L:39082469..39082488 | 20/20 | Sense | target | foxi1.L | ||
| Chr3S:114751058..114751077 | 20/20 | Antisense | target | foxi1.S | |||
| Chr4L:119560080..119560099 | 18/20 | Sense | off-target | grap2.L | |||
| Chr2L:14703632..14703651 | 17/20 | Antisense | off-target | LOC108707421 | |||
| Chr4L:94042461..94042480 | 16/20 | Sense | off-target | cop1.L | |||
| Chr7L:61798707..61798726 | 16/20 | Antisense | off-target | LOC108696306 | |||
| Chr4S:18115321..18115340 | 19/20 | Antisense | unknown | ||||
| Chr4L:67732200..67732219 | 18/20 | Antisense | unknown | ||||
| Chr1L:72185109..72185128 | 18/20 | Antisense | unknown | ||||
| Chr3L:59108587..59108606 | 17/20 | Antisense | unknown | ||||
| Chr5L:132545581..132545600 | 17/20 | Antisense | unknown | ||||
| Chr8L:111420452..111420471 | 17/20 | Antisense | unknown | ||||
| Chr2L:176980776..176980795 | 17/20 | Antisense | unknown | ||||
| Chr8L:71007834..71007853 | 16/20 | Sense | unknown | tropicalis 10.0 | Chr3:32479645..32479664 | 20/20 | Sense | target | foxi1 |
| Chr2:94869027..94869046 | 18/20 | Sense | off-target | nhs | |||
| Chr6:72133233..72133252 | 18/20 | Antisense | off-target | slc9a3 | |||
| Publications | |||||||
| ???morpholino.displaySummary.papersFirst??? |
FoxI1e activates ectoderm formation and controls cell position in the Xenopus blastula., Development 2007 |
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| ???morpholino.displaySummary.papersRecent??? | |||||||
| ???morpholino.displaySummary.papersAll??? | |||||||
