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ECB-GRNA-26396913
gRNA Name:
ctcf gRNA1
Synonyms: HpCTCF sgRNA#1
Genomic Target: ctcf
Derived from:
PAM Sequence: AGG
Sequence: 5' TGGAGGGGAGCCTGGTACTG 3'
Synonyms: HpCTCF sgRNA#1
Genomic Target: ctcf
Derived from:
PAM Sequence: AGG
Sequence: 5' TGGAGGGGAGCCTGGTACTG 3'
Genomic Target | S. purpuratus | ||||||
Identities | 19/20 | ||||||
genome
gRNA
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5' CAGTACCAGGCTCACCTCCA 3'
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3' GTCATGGTCCGAGGGGAGGT 5' |
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Genomic Alignments | Position | Identity | Strand | Genomic Target | S. purpuratus 5.0 | NW_022145614.1:9072291..9072310 | 19/20 | Sense | ctcf |
NW_022145540.1:127705..127724 | 19/20 | Sense | LOC593001 | ||||
NW_022145609.1:32321794..32321813 | 18/20 | Antisense | LOC588988 | ||||
P. miniata 3.0 | NW_024037059.1:26601222..26601241 | 19/20 | Sense | LOC119728379 | |||
NW_024037061.1:13173632..13173651 | 17/20 | Antisense | LOC119730419 | ||||
NW_024037072.1:24780237..24780256 | 18/20 | ||||||
L. variegatus 3.0 | chr3:66731040..66731059 | 18/20 | Antisense | atp23 | |||
chr1:96018771..96018790 | 18/20 | Antisense | LOC121429553 | ||||
chr1:96075459..96075478 | 18/20 | Antisense | LOC121429561 | ||||
chr2:23517752..23517771 | 18/20 | Sense | LOC121407614 | ||||
chr2:30689672..30689691 | 18/20 | Sense | LOC121407816 | ||||
Publications | |||||||
???morpholino.displaySummary.papersFirst??? |
The crucial role of CTCF in mitotic progression during early development of sea urchin., Dev Growth Differ 2023 |
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???morpholino.displaySummary.papersRecent??? | |||||||
???morpholino.displaySummary.papersAll??? |