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Echinobase

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ECB-MORPHOLINO-26395820
Morpholino Name: LOC580458 MO1
Synonyms: Spmesh vMO
Target mRNA: LOC580458
Derived from:

Morpholino Type: translation blocking morpholino (5' UTR)
Sequence: 5' AATTTCAGACAGATTCCCAAAGACG 3'

Source: Gene Tools LLC


Target mRNA S. purpuratus
Identities 25/25
genome
MO
 
5' CGTCTTTGGGAATCTGTCTGAAATT 3'
   |||||||||||||||||||||||||
3' GCAGAAACCCTTAGACAGACTTTAA 5'
      
Genomic Alignments Position Identity Strand Target Target mRNA
S. purpuratus 5.0 NW_022145594.1:28413809..28413833 25/25 Antisense target LOC580458
NW_022145594.1:28292689..28292713 23/25 Antisense off-target LOC589327
NW_022145594.1:28211521..28211545 23/25 Antisense off-target LOC105439366
NW_022145594.1:28248845..28248869 23/25 Antisense off-target LOC115921309
NW_022145613.1:35546868..35546892 21/25 Sense off-target LOC105446090
P. miniata 3.0 NW_024037059.1:2443039..2443063 21/25 Antisense off-target LOC119727771
L. variegatus 3.0 chr13:4440752..4440776 21/25 unknown
Publications
???morpholino.displaySummary.papersFirst??? Identification of the genes encoding candidate septate junction components expressed during early development of the sea urchin, Strongylocentrotus purpuratus, and evidence of a role for Mesh in the formation of the gut barrier., Dev Biol 2023  
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