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Echinobase
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Echinobase Accession
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Echinoderm mRNA
Echinoderm protein
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S. purpuratus
(Purple sea urchin) 5.0
L. variegatus
(Green sea urchin) 3.0
P. miniata
(Bat star) 3.0
A. planci
(Crown-of-thorns) 1.0
L. pictus
(Painted urchin) 3.0
A. rubens
(Sugar star) 1.3
A. japonica
(Feather star) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus
(Purple sea urchin) 5.0
L. variegatus
(Green sea urchin) 3.0
P. miniata
(Bat star) 3.0
A. planci
(Crown-of-thorns) 1.0
L. pictus
(Painted urchin) 3.0
A. rubens
(Sugar star) 1.3
A. japonica
(Feather star) 1.0
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L. variegatus
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Download BLAST databases
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 3.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_041604201.1 PREDICTED: Lytechinus variegatus cAMP-dependent protein kinase type II regulatory subunit (LOC121411455), transcript variant X2, mRNA TAAAGCGCAACGCGCCGTACGCACACACACACACAAAAGTTCACGCAGTTTTTGTAGCGCAGCTGCCATC CAGTTTCAGCAGAAATTGGGTTGCCAACGTATTTTCGCGGGTACCCTAGCGGGGTAGATCAGGCCAGCGT TAGATGCCGGTGTGTGGCTGGTCAACCGACCTTTTATCGCGGGTGTTTTTCGTTGTCGGCTTTGCAGTAG GAACTGTGTTTATGTCTTATTCAAAAGGAGGGCGTTTGAAACTGCAAGGCAGTTTTATCCAGGAGTAAGC AATAGTACGATTTCATAGACGCTTTAGAGAAAGTTTACTTTGGGTCAAGATCTTGCAAGGCTGCTGGATC GGAGATTTTATCTTGTTTACGTTGGACATCTGATCACGGCACGATGAACTTCGAAATACCGGATGGTCTC ACCGACTTGTTGCAGGACTTCACCGTAGCTGTGCTTCGAGAAAAGCCCTCTGATTTAGTCGAGTTCGCTT CGACATACTTTGCTAAGTTACAAGAAAATAACATAAGTTTGGGTGGAAAACGTGGAGTGACTTTCACTGC ACCAGAAGATGCAGAATCTGACATCGATGATGAACCACCAGAACTTCCCAAGAACAGATATGCCAGAAGG AAATCAGTTTGTGCAGAGAAGTATGATCCTGAGGCAGATAATGACACAGATGGACAAAAGCTGGTCTACC CGAAGTCAGATGAACAGAGAGCGCGTCTTACCGAAGCTGTGAAAAATATCCTACTCTTCAGGGCACTAGA TGAGAAACAAATGCAAGAGGTCATTGATGCAATGTTTGAGAAAAAGACGACGCCAGGCGATCATGTCATC GACCAGGGAGATGATGGTGACAACTTCTACGTCATAGATAGAGGAGAATATGATATCTTTGTCAATGATA ACAAGGTTGGAGCTTACAAAGACAGTGGAAGTTTTGGTGAACTAGCACTCATGTACAACACACCAAGGGC AGCAACAATTGTAGCTACTACAGAAGGCATTCTATGGGCATTGGACCGTGTTTCTTTCAGAAGAATAGTA CTAAAGAATGCAGCCAAGAAGAGGCGAATGTATGAAGTGCTACTTGAGAAGGTCTCAATATTCAAATCTC TAGAGCCATATGAGCGTATGAACCTTGCAGATGCATTATTATCAAGGACATACGAGGATGGAGACTGCAT TATTGCTCAGGGAGATGGAGCCGATGGGTGCTATTTTATTGAAGCAGGGCAGTGTAGAATCGCTATGAAG AGCGAGGATAACCCAGATGAAGAGAAGGAAGTTGCAATCTACAATCAGGGCCAATATTTTGGAGAGCTAG CGTTGCTTACCAACAAGCCTCGAGCTGCCTCCGTCTACGCTGTAGGAGATGTCCGATGTGCCTTCCTGGA CGTGAACGCGTTTGAACGGCTGCTGGGTCCTTGCATGGACATCATGAAGAGGAATATCGAGCACTACGAG CAGGAGACATCAAGATTGTTTGGAAAATAACCCCTTCCCCTTCACATAGTCAACCATCCCCAACCATTCT TTCTGCTTCCCATACCTGTTGCGCAACATTGATTAAATTTCACATCTGAGTTAAGACTGGCTGGCCATTC GCTCACGTAACAGGCATCCGAGATACTAACACAAAGCACATACCTTGGATATCCCATTGATATTGAATGC CAACTTCTTCAAGTTTATGGGATATAGTGAACATGATGATGAAACTTTGAGAAATGTTTATGCAACTGCT TCGGTCAATTCTTTTTTATTTTTAATGTTAGTCACCTTTCAGGGATATCTTCACAGCATCTGTGCATACT ATCAGGGGTTGTTGCAAAACAATTTCTTTACAATCAATTGCAAATGTCATATACAAATTGGCAAATTGAT AGAAGAATACTAGCTAATGCAAACCTATCATGACTTCCAGTTGCAAAGAAAAGCTAATACACCTGGGGCC CGTCTTTCAAAGAGTTGCGATTTATCTGATCCATGTCAATATATAAAATGCATGTTTGTTTTAAAAAAAA TTCTAGACATGAATGTATATTTATAAATTCATCGATTTCTTGACAATTTGGTGTGTTCTTCTTTGTTTAC AAAGGACATTTTGCAAATTTCCTTTGGAAAGTTATGACACTGTGGGATTTCAGTAGAATTACGATCAGTT GGATTAATCGTATCTTTTTGTAAGACTGGCCCAGCAGTCAATTACAATTTAGTAATTAATTGCAAGATTA ATTAATTTTGGAACCAGCACTTGACTTCCAATCGAAGTTGCTTGCAATACCCCCTGATATATATCAAACT GTAATGTGTGTAGGCGGTTCCATGTTCTGTCTGTCTGAATTGCCTCCAAAATGAAATCACATCTCAAATG GCCTCTGGGAATTTACAGAAGGTATATGGGCATTGTGAGTGAGGTGGCGTTCTCATGTTTATTTCAGGCC ACACCCACTTTTCTAACGTGGCGTTCAAGGACTGGTGTACGTTGAAATCAGATTCACATTATTTTATCAG TATTACAAACCACAGAAAATAATGATCCGATCTCTTAATGAATGGTTTCATTGTTCATATTTTATGGCTT TGTCGAAGTCAATTGCAGAAACGACAATGGATGGGTTTTATATGTATAAATATATACATAGGAATATATA TGTGTATTTCAAGCTGGTTTTTATTGTCGAACATCATTTATGTCGAGGAGACTGCTCCTCTTGATGACTT TTAAATCAAAAGTGACATGGAACTTTTGTTGATTTAGTGGTATAAAACATGAATGCAAATTTGCTGTTAA TAGTTTGTACATAAAATTATCAAAGAAGTTTTACATGAAAGGTTGTATCTGTTCAATTAATTCAATATTA GAATATATTTGAGTATTGTGTTTGCTCATTTTCACAAGAACCTTGTGGAGAAGAAAATGGCTCAGCGAAT TAATGCAATTTTGAAGTATTTTCTTACACATGGAAAGATCATTAATTGAAATGATTGTTTTGTGGTACGT TCTGTCTAAAGATGTATTTGTTTTTGCTTATATTTTAGTCCAATGTGGTTGATTCTTCCAGGATTTTTAT TGTTGCAAAGTTCAAAGCATTCATTAGATTTATTAGTTGACAGATAAACATATGATGGTACTGTGTAATG AGTGCAACTCTATATTTTTTCAAACAGCTTAATTTGCCACGGTCAAATTTTTATCAGATTGATATAACCA TTATCCATTTTTATGAACTTTGGTTTTTCATACAAGATAAATTACGAAACCAGAATGTATATATTTTCAG GTGATTTTATAGCCTGATGAATTATCCCACAGTAAATTGGTAGCCTAGGTGACTGTTTCTGTTAAAACAC ATGAGTGGTCAGAACTAGTTCAGGCAAGATGTTGGATTCTCTAGGTCTTGTGAAAGGCTTTCCCCAAATT AGCTAAAACACATATCTTTAGCTCTGATTTTCTAAAGGTGGTCTACACCTTCCCTGGCCCACCCGCCCTT ATTTAAGTTTGTTTTCACATTTGCACAAATTAAAAAAAGATTAAGTACATTATATATGTATGAGGCGCAG AAGGGTATAAATATATGTAAACATAACTTCATGGGTTGTCGCACCTAAGTGCTTTAGCCAGCGTATGCCG ACGTATGTAGGCTATGGCAAGCCGTTCATTTGATCCAATTTCTTGATATCAACCTATAGGATTTTTCATA TAAATAATCTGAATTCTTGACGATTTGTGTAGTTTCAAAATGCAATTCTTGGTATTAAGAATGGAATGCT TGATATATATATAAAAAAAATGGATTTGAGGAAAAAACGGCTAGCTACAAGTCTGCTGGCTAAAACGTCA AGGTGTGAAAGTCCCTTACCTTCCTGTCTCCCAGCAAGTAATATGTTCCAAACATTTTCCCTTACATTAT CCTCTCATTTTCTAGGATTAGCAGAGGGGGTGGGGGCATAGAAAGGGAGAGATAGTCTGTGTGCATATGT CAGTGTGTCTGCGAGTGTGTGTGTGTGTGTGTTAGAGAGGGAGGGAGGAGCAGAGAAAGAGAGATTTCAT TTATATTTACACAAAAGTTGTAGGTTGCATGTCCTGTGTAACTAAACTAATTGGTGATTTCTAAAATTGT AAAAGATATCACATTTTTTAGTAAAAAAATTTATGTCAGAACTTGCACATTTTATATGGTACAGAGAGCA CAGACAGATTTATTGATTACAAAAAAAATTAGCTACGTATATTAAAGTATTTATAAGAGTAGAGAATTCA TTATATGATTGCTGTTTGTGTGTTGTTGAAAAGTTATTTACTAATCATCAACCTTGCCACAAATTGAATC TGGTTATTCAATACGCCTCAAACTTGGGTAACATTTTATTTTTCTGTGTGAGTGCTATTTTACAGGGTTC AGTTGTTGGATCATAGGGCCCAGTGTTACAAAAGAGTTTATGATTGATCTGATCAATTACAGCTATGGAA AGGCGGTAAAAACAACATTCAACATGCATTTGTCTTGTCAAGGCATTTTCTGAATATGTTGTATTCTCAT ACTTGCATCATTGACTCGGTAAAACAGTGTGCTTCATTTGTTTCAAAAGGGACATTGTGTACATTTCCTT TGCGAAAAATTGTGACATGGGATTTTCATAGTTGTGATTAATCAGTTCAGTTACAATTCTTTGTAAGACG GGACTTCGATTTCTCTGATTGAATCAGATTATTTGCCAACGGTTATGTATTCTGTGAATAACCTGTATAG ATATTGGGTATCGATGGGCCTTGTTATTTATATGGCCATATTCATTCAGAATCTTCTACACGATTTCCAG ACTAACAAAGATTTGTTTACGCAAGTGGGTGTACTGTAGAGGGGTATTAACACAAGTTTTTCTTCACCTA TTCTTTCATGACTACTCACAATTCTTCCTGTACTAATTATATACTATCCACCCTATATAGCTTGAATAAC ACACCTTCCACATGCATTATTTGTTGTATCTGAAGAACATTCCATCTTGCCCGAAGTTTAATGTTCTTTC AGTGATAAATATGATCCATTAACAAAGTGATATTTGGATGATGTATTCCCATTACACAATGAATGGTGCC CTTGTGTAAACAATCATAGGATATTACATGATTAACTCATTAAAATATTGATACATTGTAGGTACTGGTA TGTTTCTTCCGTGTATTCACATTAAAGCTCCATTCAGAAATGGGGAATCAAAGCCCAGCAACATTTTTTT TCCATGAAGGTTGATTAAAATTGTGCTTTAATGGCCAACTCGATTTAAAGGGCATTATTGCCATTGTCAA TATCCAAAGTTGTGCAGAGTTCATTTGCCAACTTCTTTTAAAATTTGACTGGTACACAACTTTCATAGCT GACTCCCTTTTGACTGGTACGCAACTTTCGTAGCTAGACGGAAAAAAAAGAAACGTTGCTGGGTTGTTTC CCTTGGCTTTGTTGTGTCAAGTCTGAATGGGACTACTGTAACAGATGATATCCTGGCAAGAATTGGTTGT GTTACTATGGTATTGATGGACACATCAGCTTGTTTCCTTGCGTGAGGGAAGCTGTGTCAGGGCTAGGATT TGATCCCTCGACCTGCCAATCCTTAGCCCTCAAGGCCACAACACTTCTGTTTTTCCAGAAATTAATAACT TGTTATTGGATGAAATACACTTGGCTTCTTTGTTCTCTTTATAAGGCAAGCAAAACAAGTATCTTTTCTT CAAAATTAATTGTTGTGCAGTAAATGTACCTTTGATTTATCTTTCAAGTGATATGCTGCCAATTAGCATC AATGGACTATTTTATTGTCTGATCAAAAACATGTTACAAGGAGTCAAAATAAAGCATTTTCATAATCAAC CTTGTGGCTGCCATTTTCATGTTGCCATTCTTATCACTATGTTAAAACTTTGAGAAATTCTAAAGTGATA TTTTGTCATTGATTTTTTTTTGCGAAGTACAGAGTGTGCTGTATAGGCCAATTACCATGACATCTTGTTC ATGACTATTTCATTGTTGATCATATTTTGGAAAAGGTTGGTTTTGTATTTGTTGACAGCATTGTTGTCTT GTCAAAAATGTGTTAGTCATTTCCAAATAAAAATGAGAATCTTAAAAAAAA
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???blast.matrix???
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???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
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BLAST time is limited to 30 seconds