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Echinobase
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Echinobase Accession
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Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
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BLAST Databases
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Download BLAST databases
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>JT116486.1 TSA: Strongylocentrotus purpuratus WHL22.120874.3 mRNA sequence CCATCACAGCTTCCTTCTGCATTATCTACCTACGTGCTTGTGAGATTATTCCGACCCCAGTTAGGGTTTC TGCTCTTGGCATGTGTACCCTCTGCTCAAACATGTCCAACATTTTAGCCCCACTGATCCTGCTTCTTTCC AAATACTGGTATCCGTTTCCCCTCGTCATTTTTGGCTGCTTCGCTTTCATCGGGGCAGGAACTGCCTACT TCCTTCCAGAAACCAGAGGCAAAAAGATACCAGAAACAATGGAAGAGGGAGAAAACATCGGATGGAAAGC CGCACCAAGAAGAAACAGTCGCGTCGTGAATAGTTCGAAGTACTCCAATATCGACTACCACAAAGCAGGT GAAGAGATGGGGGACCCGGTGTAAGAGATGAACGAGACACAGTCACCATTACCACCATAACCCCTTCTCT GTGAGGATCCTCCGCACACAACCCTATGAAGAAATCCCAACTCGTTGTCAGACAACTCTTTAACCTCTGC ATTCGGTGTCACTGGTAAACTTCGTATATGTATTTGAGTGCATGGTGTAATCAATGAAGGTGATAAATTC AAAAAATGGTACATGGGTAAACAATTGATCGCAGCTCAGTGTTTTTCTTCTTCTTCTTGGACCGCGCCGT TTAAAAATAACATATAACATGTTATGCGTTTACACCATTAATTTCTTCATAGTGTTACCAGTATGTGATT ATGCAACCACGTGCATGTGGGTTGCATGTGAGTTCGCGGAGTGACATTGGGTGATTTCAAGTTGGGTGTT TAGGGCTAGTGTTTAATAAATACTAACACCAGCTTTAAACACCGACATGGAAATCAGCTGGTGTTAAGAC TTTGACGTCTGAATAATTATCGTCAACCTCCGGTAGCTAGTGTTATCGATTTTGCAAAATTGTCGTCTGC TGAACGCCTGAACCGACCTTTGTGGCTAGTGTTAATATTTTACGTACAAATTCCCTATTCGCTAACACTA GCCCCTACGGATTAAAAAAAATGTTGAGTTTTCAGTTCGGTGTTAGTAGTGCTGTATCCGCACAACAGTC AACGCACGGACGGCGCTAATTTATTGTCTGACGTTCAAATAGAAATATGTGAAACAGGTCCTTTACTATG TGATTTATACATTCTTTTATGTAAAATGGACTGTGCGGATGAGCCTCACAGATGACAAAGTTCTGAGTCG TGTGGTTTGCTGATAATGAAGTTCGCTGAATGCTGCTAAAATGAAATATGCTTCTGTGTGAGTTTATGTA TTTGTTTACTCAAATTTTATAGCTTAATGAACATGACTCATAAATTCAATTTCAATGCACTCAATTTATA TGAATGTATTCTGATTCCATAACTATTTGTACGTATGCTGCATGTTTTGGGGTGTTTTTTTAATAGATTA ATAATCGTGTCTCATATGTACATTATACATATACATGTATAAATAATAAATACACACTCAATTTATATGA GTGTATATTCTATAGCTCTCTGTGTCTTTGCTGCATATTTTAATGAACAAAAAATATATCGTGACTTATA ACGAACAGCATTGTGGACTAAATGGCTTGAATGTCTCATTATCTACGGTTTTAAAGCGGCGGAATTTCTC CTTCCCATTATTTCTTCTTCAATTTCATCGTGTCTTTTTCTGTTCTTTCTTTATTCTTTTCATTTTTCAT CTCCAAAACATTCCTTCAACACTTTTGATAAATTCAGTCAGCAGTAAGGAAAAGAACCTAGATTCTTTTG TATTCATTTGCCTCCGTGTAGTTTTTTATGTCCACATGCAATGTGTATTTTCCTTCACCCATAATTATGT ACCGTACGGTGAAATTTAAAATACTATTCAGGGAACATCACATTGCATCCATAACCATATCGTGTCTTTA AATTATGACACATTGAGAGTATCATGACAATTACCCTCTGGGCAATCACCCCTGGAAAACTACCCCCAAG GACAATCATCCCTGATCAATTATCCCCCACCCCTCCAGGACAATTACCCCCACCCCTGGACATGACCCCC GAGGAAAATTACCCCCCCCCCCCCATCTTGTTCATTTGAGGGGAAGTCTACCCTGGTTATAAATTGGGTA TTAAGTAAAGCACTTTTTCGGGGGGGGGGGTACTAGTGTCCTCGGAGGTAATTTTCCCCGGGACTAATTT GACGGGGGGTATTGTCCCGCTGGTAATTGGCCGGGGAGATTTTCCAGGGGGTAATTGTCCTAGAACCTTC ATTGAGCCATAGTGTGATCCCAAATGTTCTTGTTTATTTCAGAAGAGAAATGTTAAAAGCTAAATTCCAA TTTCGGCTGGGGGGGGGGGTGGATTTTTTTAATTACCAAGTTTAACTTTCGATGTCTTTATGTTCTATGT AATGTTTTTATTCGCATCTCAACATATAGATCATTTTGTTTTACAATGAATGAAATTATCATAATGCATG TCGATAGGTATTTTTACATGTATATAGGCATGTCATATTTTGCATTTGCATTAACTATGTTAACGGGTTT TTTTTTAACCCTCAATTAAAAATGGGGTAAGTATACACCCTACCCCCATTCCCCGTGTATTACGTCTGTT ATTCTCACTTTACTCCTACGGGCTTAGACATTTTGTTTCTTCATTACGTGTAAGATTTTTTAATGTGTAT TTTTTTCCAATTAAAACAATGAATACAACGAGATTCTATGTATACTCTTAAATTGTATATTTTACTGAGT AAGAGAGTTTGAAGGAAAACAAATTTTAGTATGTTTTTGTTTTTGTTTTCAAACGACGTGCTGCTACTGT AATTTCCCTTCTAAATTTGACAACTTTCTATGAAGTATCAATAAGGCAGGTTATAGTGACAAACATTAAA TATCTACTATCCAAGAACTATCAAACTGCATCAACGCATATATTTATCAATGTCTCTCTTACGGGGAATT TCTCTCCTATAGAAGTGCTGACAAGAAAAAGGGTACCACAATGCCATCCGGGAAATTCAATTAAATGGAT TAAGTAGCGATCACAATTTCAGTTGCAGATCTCCTTCAAAATTAACGCAGGACAGGTCTTCCAAAAGCCC TGGTCCAGTTGTCATTCAACTACATACAACATCCCACGTATATAGTTAATGGGAAATTCAATTCAATAAG GATTTATCAGTATGTTTAGTGCCTAAAAGTGCCTGTAAGCGGACGTAACGTTATAAGTTTGGCAATTTTG CTTTTTGGTTTGTCTGTTGTTTGGGGGATGGGGTCGATGGGCAACAAAATGGGACGGCACTTCCTTACTC ATTCACTTGTATTAGTTCGATAAACTTCAAGAGTATTAATCATCCAAAAACTATTATTCTCTGTATTGTT TAGAGTCTTCGTTGCTAAATTATAGGCTTTTCCGTCTATTTTAACACTTCTTTTGATTCAATTTTTGCAC ATCTCATAGTCAATTTCGCATGCAATTTCCTCAAAGTCCAATCAAATTCGTCATTAGTGAGTCAACATTG CATGTGCCTTTCTCCATTCTTTGGGTGGTGTTTAAAGTGACTAGTGTGTATGTTACTCGGTCAAGAGATG ATTCCATTTAAGCAAGAGCTGAAGATCCTTTCTTTTATTAATTTACTTTCTAACTCAAACATAGCACAGC ACCGGCATCATTCATCAGTTCGTTCGTTCGTTCGTGTCTCCTTAGATCAAAGATATAGCCACACATTTGT CCATCATTTGAACACAATTTTACAACTTGTATTGAATGTTCCAAGTTAACCAAGTTAACACACACATACA CACGTGAAAGAACTCATGATGTTTTTCACCCGTTAGATACATGTACAATTACCAGCAAGACAATCACCAC CAAGGACAACCACCCCCGGACTATTACTTCAAAAAATACATTCCGCTTTTATCAAAACCAACTTAATATC AGGGAGGATTTCCCCTTTAATGAACAAGGGAGTAGTTTTCAGGAGTTGGTGTTATTGTCCTCGGGGGAGG GGGGTAATTGGTCTGATACGATTAAAACACAGCAAAGGTTTTCATTACATGGGCATTGGGCTATGTGACC ATCATCTCATTAATGTGAACAAAATATTGCATATGCACATAAATGATTGAAAATGAATTTTAGTGTTATT TTCAATAATCATCTTTTTAATAAAATATACTAGTCATTTTCAAAGACTGAAGTATTCATACAATCAAATA AACTCTTTCATATATCATTGAGATGATCAAATGAAAAGGTAATAAAAAGCATTCAATAATTAACTCTTCA TATGCCACACAACTTGAAATACTGTTAAACTCATGTTAAATTCCATGTTCATTACTGCAATTTTCCATCA AACATAAATCAACAGAATTATAATTGCAATTGAATGCACAGAAAAAGTCCAAAAAAAAAAAAATTAATAA ATATTCTTTGCATGCGTAATGATGTTTACTTTTACTGTTCCAATATTAATTTGTGACATGGAATAACTTG TGATATATAATATAGTAAGGCACAAGTGAATAAATGTGAATTATCAAACACTTTCAATATTTCTATTTGC TTGAAGATTTTGGTTGTGTGTGTAACCATGAGAAAAAAGCATTCATGTGCACTTCCCAATAAAAAAAGAG AAGAAAATAAAAAGCATTATGAGATACAAGAAGCTTGATACGTCTCTGATTTGGGTCTCGTCTCAACAGT TGGGTACAAATGTAACAACATTAGTTTTATTCTTTATATAAAATTTAAACTACTTTCAAAAAAGTTGAAC GTTAAATAGGTCAGCAACACATATACATGTTTGTACTTGTGTGTGATTGGGTTTACTGGCTAGTGCCAGG CTATAGAATTGTAAATGTTAACTGTAAAATAATATTGACGAACAATTTTAAGCAAGTTATATTAGGTCAA GTTATCGACATGAAAAAGAATGGAGAATTGTCATTGGGTGACTAGGAAGACTGGTCTGGAAAATATTTCT TTAGCTTATGTGATCATGAACAATATTTGTAACATGGTTATCATAATAATCATGAATGAAATATGTTTGT TTGAATTTTCCACCCGTACATTTTTTTTGCATTTTTCAAGTCTGCTAAATCATCCTTAGTCTAGCCTCTT TCATCATAACAAAAAACACTCATATACTTATTGGTGACTGAGGCAGTGATACATGTATTTGGGTTCACAT CCTGTCATTCCAAATGCATGTTACATTGACATGAAACAAGTGACTGTAGATAAACATACTTCTCATGATC TCTTTAGATGTAATTTTCCTCTTTTAAATGTCCATTTGATCTAATCAATATGAATTAATTTACATCAGAC AAGATTTCACTATGCACCATATAAAACATTTACACTTCATTACTCAATAGACATGCACATTAAATGTAAA CATTCTTTTTACCCTTGACTCAATTATCATGATTTTGTTTCACAAGATTTTGAATCCATGAAAGTCAACA ATGTCTCCACTTGGTTATCATCGAAGAGAAATACTTTATATTCAGGAGCCACATCCAGTGCTCACAGTTA CCCTTAAAGAACAGAGAAGGGATATTTGCTACTGTATGTAGCCACTGAATCATCAACAAGATACTTACAA GCCGACACTTACAAGCAGCATCTAAGATATTTATCAATAGTACTTGTGTAGTAAAATTGTTAAATCTCTC AATAAAAAATAGATATTCAAATAATGTATATTTCTCCTTCATTTCCACTTCTATATCAATACTGATCATC ATTCACTATCTCACACATACACAAACTTGAAATAAGGATGTCTCTTCATTTACATGGCACAGTTTTCTGC CAAACAAGGTAAAGCCCTATGACTGAGGCAATGATCCCCCCACCGGCTCCGACGCCCTTGTTGACGTAAC CAAGGGCAGCCAGGGGAATGAAAACATCCGAGAAGTCGAGGATGAACTGTAGCCTTGCCTTGGTGATGTC TGACTCTAGCCGCTGGCGCGGGACTGGCTCACCTGCTCTCTTGAGCTCCTTGAGGCTGAGGGAGAGCTTC TGTAGTTTGTAGAGGTCTTTGATAGTGAGGGCTAGGAGACCTATCAGCCAGAACCGGGCTGAAGTCTCAG ACCATTTTTTAATGTTTACCTAAATGAATAAAAATAACATATTAAGTAATCTCATTG
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???blast.matrix???
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???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
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BLAST time is limited to 30 seconds