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Echinobase
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Echinobase Accession
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Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
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BLAST Databases
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Download BLAST databases
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>JT119851.1 TSA: Strongylocentrotus purpuratus WHL22.738139.0 mRNA sequence CGGAGCTGAGCTGAGAGCGGAGTTTAGCATGGTGCGCAATGGCGTACGGGTATGGCGCCTACTAGCCAAT CCGACGGCCTGATAGCGGTTCAGCGTTCCCACTGATCACTTTCAATAGGGCTTACTACGACAGGTGATGT GCATAGGGTAATGGTTTCCGGACAACAAGTTGGAAGACAGAGTGCGGAAGAGAGAGTGAGAGGGAGAGAG GATAGCCCAATTCACTTGCTAAGCTGTCAACAAAAACCATCGAGAAGAAGGGTAAATAGTCACGGCTTGA CATGACTGAACGTCATCAAAACTCAAACAATAAGACGAGTAGGATGAGGAGTTTGGTTTGTTAGTTCGAC GTCGCGTCGATGTTGTCGCTTTACTTCAAAGCCGACCCACACTCGGTGATCGAGTTTGATCCGAAAGCAT AACATCCACCCTTCTTCGTTTCCCGTCTCATTTTCCGTCAGGCTTTCGCCATCCATGGCCGACATTTCCT AAGCTCCGATGAGAAGTAACTCAGACTTGAGTTCTCGCTTCCAGAATTAAAACTCGACTGTTTATATTCC GTTTTTCTCTGGACGTTAACCTTTTTCAGCAGGACACCGGGTCATAACTTCCCTCCTCACCACAAAAAAA ATCGAAGACATCCCTACTCAGCCCTGGCCCTGTACCGCGGACAAGGTGTTTGAACACAAGACTCTACCGC ACACTCACAATCTTCTTTCTGTTCAAAGAAGAAACAGAAAAAGAAGGACAAAAATCGATTCCAAACCTTT CGCAAAGAAAAGGACCCGCTAAAGTGCTACCCTTACAGTTGTAAGTTTCTTTTCTCCCATCCTCGATCTA TAACTGTTGTTACGTACAGCTGATTTAAGAAAAACGCCTGCGAGTTTCAGCTCCTTGGCACAGAGGCGAC GCCATTGCTTCTTCATAGTAAACACTTGGGGAGCTTCGAACCACAATCTGTCAGAAACATTTGAGCAGAG CCATCGTGATCAGCCGAACCTACGCTGGAGTTAATACCTCCATTCCGCTACTCGGGAGGAGGCAACCCAG AGCGTTATCCAATGATGAATATGAAGGAGCATGTTGGCATGCATCCTCCCCCGCTTGGGCCGGGAGGACC CAAGTACTCACCGCTTCATCGCCACCATGACCGGGGACTCGAGATGACAAGACGACATTGCATGAACGGA CCAGGTAACTTCTTTGGTCCTCTTGATGACAGTGGGTTCCTGGCCCGAGCTGAAGCTCTAGCTGCTGTCG ATGTCATGTCCTCTATGGTGAAGACTAGCCAACCTCATATGACCATCAAGAACGACACCAACTACTCTCA TCATCACGCCGTCAACAGCGGCATGCATCCAGCACACTTCGCCCCGACATCATCTCCAGTATCTCGTGGT CTCCCTCATCATCATAGCATGGATCATGGTGAGTTCCTTGACATCTCAGCAGCAGCTAGCCTTCCTGGAA GTGGTCCTGGACCAGGATTGTCCGATGTCCAGAGCGCAGCAGCAGCAGCAGCGGCAGCAGCAGCCGTGTC GCATCAATCATCCTTCACGCCACTACCAGGTACCGGTGGTCATTTCAACCCGATGAATACGATGATGCCG CATGGTATGGGCATGCACGACATCGACACTGACCCTCGAGAGTTGGAAGCATTCGCAGAGCGGTTCAAAC AACGCAGGATAAAGCTCGGCGTCACCCAAGCCGACGTCGGTAAAGCTCTGGCAAACCTGAAGCTTCCTGG CGTAGGATCACTCAGTCAGAGTACTATCTGTAGGTTTGAGAGTCTTACACTCAGTCACAACAACATGATT GCTCTTAAACCCATCCTAGCGGCATGGCTGGATGAGGCGGAGGCTGCTGCAAGAGATAATCGAAATTCAC CTGGTATCCTTGACAACGGAGACAAAAAACGAAAGCGAACGAGCATCGCTGCTCCTGAGAAACGTTCCCT TGAAGCATACTTTACCGTCCAACCAAGACCATCAAGTGAGAAAATAGCAGCCATTGCTGAGAAACTGGAC TTGAAAAAGAACGTGGTACGCGTTTGGTTCTGTAACCAACGCCAGAAGCAAAAGAGAATGAAATACTCGG CGCAACCGAGGTGAGAGTCCTCCCAAGCTCTCAAAATCAAACTGAAAAGTGGAAGAAATATAGGACTTCC TAAGAGACCTGTGATTACAATATTTTCCAATTTGCCACATGACTTTTGTGAATTATTCTAGCTGCCAATT CGAGGGTAAACACTGGTAGCCATTGTCCTGTTTCCCATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT CTCTCATGAGCCGACCTGGGATGGACGATATAAAAAGAAGTGAACAAAAAGCTAGCCAATCAATAGCGAT TATCGTATTTCTTCATCGAGTGGTGACAGGCGAAGCAGGGAAAGCAGCTATTCCTTTGCCTTACATGTTG TATAGTCATGTATAGAAATGTAGACAAACCTTGTATTGTTATCCTGTGACCGTTACACCTGTACTGTACA CAGTAATGAAATAATGCATCACACAGCTCGGCTTAATACGTTTAGGTCCGAAGCTTCCGATAAATGCTCC TTTGGTAACAATCAATAAAGAAAGAAAGCGAAAATGTTTTAATTGAATGCTTCAGATCAATTTTAGGATG TTCTGACTCTGACTTGATGAATAATGTAAACAGTGATATGAATTAACATGAAAATGGAATTTATTAAATA GTGTCAAATCAAGTAAAATAACATGTACACATACTTGCAGATTTGAAATGACGATAATGATGAAAATCAC AGAATTTATGAATAATTTATCTCCAGTATAAACATTAAAATACTTGTAAATTGTTGATTTATCATTTGAC CTATATAATTATATTATGACCTACAATTATTCATTTTGACAGGGTTGAAGTTTGTTCCAGCTCTAACAAA AAATAAAAAGATCAAATTATACACTTTTAAAGCAACTGTAAAGGTGCTGAAACCTCACATTCAGCTCATA AGAACAAACACAATGATTTCAATTTGGGTATCATTTTAGGAAGCGACCGGACAAACCATTGATTTTCTAG TTCTGTCACGTAATTGCGGTGTTTTAATGGATTAGATTTTTGGTGCTAAAAGACGATTTCTACTGCCCCC TGCTCTCTTCGCCTCCTATTTGTGTTATCATGATAAACCATTGTCATTGTTTGCTTGATATGTGCTGGTG AGTTTAATATTGTTCAAAGCGTGCACTTTATACGCTACGATGCTATAAGCAGACATGAACACGTATATCT AGGTCACGTGTACACCAGATTGGCGGGCAATTGTTCATAAAATTCGTGATTGTTATCTCTACAAATCGTC TGCTTTACTTCAGGGTGATATCCCGAGCACTCAACTTTCAGTCAGTGCATTTTAGACTTGATTATAATAT AATATAGTACAATGTGGGAAATATTCAAATACTATTCTATTGTTATAAACAAAGCAATGTACTTTTCTAG ACAAACAACACAATAATTTTCGTGCAGGAGGGTTAATATAATTATTATGATAATAATATATTGCATTTAT CTGTTAATAGTATGCATATATTATTGTTGCTATGTCGGACATGTCTCGGTAAAACTCCTGGTTAGCTACA GCAACCTTTGTAGTGGATGTTTATGTATTTACAATTATGAATAATATTATGAGCTGTAGCCTATTCATGC ATAATATACCCATGATTTTTTTAAATGTTAAAATCACGTACTGCCTTATTCCTATCATCATCTAAATGAA AAATAACAACATTAATTTAAAAAAGACGAGTTTGAATGTATTAATTAATTTAAAAAAAAGAAGTTGGTCA TATAAGGGAATTTCTTTACGTTAAAGTATATATCACACAGAATATAGTGATAAACGAGTAATATTTGGAG GCATATGAAATTGAAAGTTTGCTTGTTATTACCAATTGAGACCATGAGAAGGTGATAATCAAAGTTTTAT ATTATATTAAAGACATTCTTCTTCTTTTTTTTTTCTTACAAACAAAAAATAAATTAAAAAATATCCCAAG GAGAGAGATTTGTCTTTTAAAAAAAAAATAGATTAATCTCCCATCAAATTTGGTTGATCAATGAAATAAG TATATTGTTCAAATGTCTTTTCATAAAAAGATTTAATACTTTAACAAATACGACCATGAATTTCAGTAAT TTTCTTTTTGGGAAAAGCAAAAGAAGCTAGATAATGCGATGGAAGATATATGTCAAGAAATGAACAGAGG AATTATCATTCGGGATTATAATTCGCAAATTTAGCTGCATAGAAAAACAATTTCCGTCAATAAATTATGA AAATAGGTGAATTCCCTTACCAACGAATATAGGCTAGGTGACAGATCAGATAAACAAAAGACAGAGAGGA AGGAAGAGAGAGAGATAGAGGGGGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGGGGGGGGAGGAACG TACTGGAAATGACCAATACTGCATATTTAATTGGCTTTCCGCAAATTTACTTTGGCGCGACAAAAATGAG TAAAACGGGAAGAATGAAGGGGAGAAAATATCGGTCATAATTTCGGCAAGAAGAGGAAAAAAAGGGAAAG GGAATGAGTTTGTGTGTTTAACTGCATATGATGGAAGGTAACTCTAGGAGTCATGTGTGATACGAGGATG AGACGAGATGTGATCGGCTAATTTACTGCCACTCACCCACGCCTGGCTGCCCCGTCGATATACCGCGGCT GCCCTGGCCTGGCATGCATGCCGACTCAAGCCGCTGGTCGTATGGTCTTAGCTTCAATTTGATGAGATAT TATAGCGGTGCGAAGTAGCTTTTCGCGCCGATCACACGGGCGTGAAAAATGAAGGCGCCCATGCATGGCA CGTCAATTTCTCTGGTTTTGTTACCTCCCGTGCTCCAATACATCCCCTTTTCTCTGTACTCCCTTTCATC TTTTTTTCCTCAGAGTAGGAATTCTCAACAATGCTAATTAGCAAGCAACTATAATTAGCTATCCACTATT ATACTGTGACAGAAGGCCCGTTCGGTAGAATTCGTTCCTTACGGCAATGATATTCACGGTATACTCTGAT GGGTCGTTCAGAATTCATCGACTGGCTCCCACACGTTGAGGGGTAATTATCTTCTATAGAACAGATATAT GTCATTTTTAATAATTGGTTTAAGGTCCATCTATATGGCCTCTGTCGGGCATTGTAGGGGTGATGTTATG ACTCTATACTCATCGAATTCATGGACTTGCTTTTCAGAGATTAATTTGATTTTTTCCCCTTCTAAATACC ACCAATTTCCAGAATTAATCTCTTATTTTCTTAGTGCTTCAATGACGATTTTGGTTTTAAAGAACCTAGA CAAAAACTGGGGCAACGCCAGACAATTTATAATAGGAGTGTTGGATCAAAATGTGACGAGAAGGTGGTCG AAAATATTTTTTACAAGTTTGTTCTCAAATGTATATTTTGTGATCTGAAAATGAAAATCTTCCACAGAAT ATTTTGAATGGGGAGGGGGGGGGGGGGGGGTGTAGGACCCCAACATCTCCTTCTACAGATGTCTCTGTGT TCAATGGTATAGGTTGGATCTAGCTATTGAGGGGGGCACTTCCATGGGGGGGGGGGGGTATTGAATCTAC AATTTGATCAGTGAAATAAAAATAATCGTCACCGCTATGTTAACTTTAACTTCAGGGTTATTAAATATAT CCTAAAGCCCTTTCCAGTAACTAAAGGGTTTTTTGTGCTCTAGACTACACTGATGTAGTTTCACGTAATT ATATAGTCGTACCCTACACAGCCAGTGATTGAAAAAATAAAAGGAATTGTAGATTGCGTTTCAGTGTCAG GGTAGAGTCTGTTACTGTAGATTAATTCATGAGATGAAACACTGTGTATAATATAACCATCGTGGACTTG GCGGTAAGCTATAAAAAAAAAATCCACACTAAAGCCATTGATATCACATGAGCAAGAACCCCCTACGACA GACGATGCATTATTTCATTACTTAATTCACAATATGAGTCATTAACAGAATGTTGTCCTCATTATAATAT GTATATGATATTTTCTATGTACAGATTCGTATGATGTAAAATCTGCTTTCTGTTTGATTATGACACTGAC CAGAAGAAACGAAACGGAGATTGTATTTCTAATGAAAATTGTAAATAATTATCATTCTCGATGTAAAGTG AGGAGAACATGTGAAAAGTACAATTATCAGGAAAATAAATCACTTAAATTATTG
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???blast.numalign.100???
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???blast.matrix???
???blast.matrix.blosum62???
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???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
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BLAST time is limited to 30 seconds