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Echinobase
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Echinobase Accession
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Echinoderm mRNA
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S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
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BLAST Databases
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Download BLAST databases
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>NM_214472.2 Strongylocentrotus purpuratus transcription factor SoxD1 (soxd1), mRNA GGTGATGACACGCAGAGCAGGGAAGACGCAATGAGGGATGACCTGAATGAGCGATTACAGCAGGAAGCAA CGCACAATGGCCACGCTGAGGATGAGGAAGTGGGGAGGACAAGTCGGGAACAGGACCTGGAAGACACTCT GGCAGTCAAGGACCAGAAGCTGGAGCAGTTGGTAGGCCAGTTGGGAACTTTAAGGGAACAACTCTTAGCA CAGCAAGCAGAGGCAGCGGCGCTTCAACGCAGTCAGGTCCAGAGACAACAACGACAGATGGAACTTCAGC GTATGCAGCAAGACATGTTACAACGACAACAGCAGCAACTCATGGAACAACACCACAAAATTAACATTCT CATGCAGGCTTTACAGCAGCAGCAGCAGCAGCAGCCTGCTTCCCCTTCCCCGTCGTCAGCCGCAGCAGCA GCAGCTGCAGCTGGTGGCGGCTTTGTTCGTCTCATCCCAGTCTACCCTACAGACTACGTCAGACCACCTG CCCCAATCCTTGTCACTAGCCCCAACGGTCACAACGCTGCGTTGGGCCTTGCATCTCAAGCCAATGGCAA ACAGATCCCTTCACCGACTACCCCTCTGGGCCAGGCTAAACTTGCCACATCACCCGTCGGCTCAGGGCAC ATCCCTGCTGTCTCACCAATGACAGGTAGCCCTAAAGGTCTCCTGACGATACCACACGCTTCCTTCCCTC CGACCGGCTTCCCGACCATGCCACGAGGGAGCCCTACCGGTATGCAGGCCTACCACGAGATGGCGCCAGA CCAACCTCTTAATCTGTCTCAGAAAGGATCATCATCGGATTCTTATAGGTCTGATGGGTCTCCCATTGGC TCACCACTTACACCACCACCAACTCAGGTTTGCGTGAGGTCACGCCCAGTCACGATAACGGAACCACTGA AGCGAAGTCAGTCGTTATCACCGAAAGCCAGCTACCAGAAGTATGCTACTCACGAAGCAGAGATAGTCAG CAATGCATCCTCTCATACTCACGTAGAACTGACAAGACCCTCAGCTGGTTCTCTGGCCGATGCTCTACAA CGTGTCAATGCAGATGCTCACTACGGAGATAGATCACCATCAGACAAGGAACAGATAGCACTTGATACGC TCACCAACCAACTACCAATCAGATCCTTCTCTGCTAGTGACATCACAATGGGAAATATAAGTGGCAGTGA CGATGAAGATATGCTAAGCAGGAAAGGAATTGTGATTGATCTGACTGAAGACGAAGAAAGACCCAAGATA GATATCCAGGTTGATCATGCGGGTACGATAGCTCGTATGTATCGTGATTCTCGAAAGGCCGAAGCCAGCA AGCCTCACATCAAGCGGCCTATGAATGCATTCATGGTTTGGGCGAAGGAGGAGAGGAGAAAGATCTTAGC CAGACATCCTGACATGCATAACTCCAACATCAGCAAGATACTGGGTTCCAAATGGAAGACTATGTCCAAT GCTGAGAAGCAACCCTACTACGAGGAACAAGCCCGACTTAGCAAAGCTCATCTCGAGAAGTATCCGGACT ACAAGTACAAGCCGCGCCCTAAGCGAACGTGCATCATCGACGGCAAGAAGCTTAAGATCGGCGAGTACAA GGCTCTCATGCGAGCCAAGCGTCAAGAAGTTAGACATGTATATTACACACGCGACGGTGAGCATATGATA AGAGCACCCTCTATGGCAACGACACTCAACACGCCTACGTTTCCATTGTTAGACTCGTCGGGTGGGTACA CTCTAGCTGGTATCAGACCTCCTACCCTGCCTACCATGGTCGATAGCGCGTCATACGAATCGGAAAATGG AATCGCATGAGAGTGATAGCGCCCTCGCGTCTTATTTCTGTACATCAAAACGGTTTGTAAAATGTATGAT TTCTTAATACTTGCGTTCAGCTATATCAAATGCTGACTTTGCGTGACGATAGACTGCAATGCTCGCTGCG AATTTTCCGTGAATATATGCATACTGTCTAACATTTCAGGTGTATTTTAGATCGGAAAGGAAAATGTGCT GCTAATTGAACCTGAATGGGTTGTGTCGGTCACCCTTGTGGATGTTATAAATGGAATATGTAAAGACATT TATGTAATGACGTGTATACTTGTATAGAATTGTTGGATTGTGGTATATGGGTATTATGTGAGAAAGGTTG GGAGTGTTCGGCAGCTTGCAGTCTATCGTTGCATTATATTACGTTTTGAATTACCATACCCACCTTACAA GCATTGTCAAACAACGCCTGACCGGAACGCATAGAATGCGTTCAAACATAGACTATTTATGAGAGATAGA AGAAGAAGTATTTATTTCATGCAGCTATTTTTTTGAGATATTTATCTGAATTGTTATCTAGCCGGTGCAT GTCAAATATAAAGAAAGTATCTTGAAAACAGTGCTACCCTTAAGATTGCAGAATACTGTGATCTGTCGGA TAGATACATTTCAAATCATTAAACTTTTGTTTGCTGACTGGTCATTTGCAGTAATATTATTACTCATCTG TAGACCGTTTTCAAAATTGTTATTTTTCTTTCTTATAATTGACTTGAACTACGCAATAGTTCTCTTATGA TACTGGAACAGGACTTCCTTATAAATGTATGTATGTTTGTATTATTGTATATAAATGTAGTTGTGAATGC TCAAATTTTTCTTTGGGTTGTGTTTGTACAAAAATGATAAAATACAATCGAGAAAAAAAAAAAGACAAAA ATGTGGAGCAACTTTGACAAAAAAAGGTAAGCCGTGCAAGAGTTACGTTTGCAACTGAATCAACGAAACT AAACTGATTAGATGTAAGATTAAGATAATGAGGATAATGTTGGAAGTCTAATTAATAATGAGAGTTTTTT TGTACCATACCTCATACTAATTGCTTCATGTGGTTTTAACAGTGTGATGTTTTGTGACTTTTGCATGGTG TACGCATATTATATCGTGTGATTGGACGTGGTCGTTAGATTTAGATGTCTAATGACTGGATAGTAGAAAT GCATATTCGTGATCATGCTAGTGGTAGACAGAGAATGTGGACTAAACACAAATTATAAGCAAGCATGATG ATATTAGAAGCATATATATATATATAAATATATCTATCATGGGTGGACACTGTGACAATTGTCTTAGTAT TAATGAATATGTATGAGCTAGAATGTGACGAATCATGGATGGCCGGTGTATTAGAAATCATGAATTATGC ATTAGTTTTCATGAATTATGCATGATGCCTATGACCATGCTTTTTGTGTACTGGAAACCACAATCTTTTT TACCCTTTGTGTAGCTCTTAATAGTTGGGTGACGCTTTGCTCTCAAACATTATAGTTTCCATGTTGAGAA AATTGAACTTTTTATGCTCTATCGTTCACCTTGATTCTTTAGTATAAGTTTGTGACTCTGTAAATATAGT ATTTACCATTTTTTATAGTACACTGTTTAGGTTATACTTGGTATTTCATATAATTTATATTTACACACAA AATTGCCCTGCTTTAGCATTAGAACGCAAACCCTGTTATTTCTTCTGCTGTACTGTTACATATCTGTATT TTTAGGCGGCTCTGTAACATAGTCCCATAGCTTCGTTTTGGTGTTGTTTTTATTTGTCCTCTCCTAATCT TGCCTGCTCTCGCTTGCAGTATTTTATATGTATTCACCCGTGATGGTATTCAGTTCTGTTGACCCATTTT TTTTCATTTTCATTGCCAAATTTGCATTTTTTTGTGCCCCCTAAATGCCATCGCCATAATATTTTCTTTG AAAACTATCGGTTGATAGCCCTTACTCTTTCTAATCATTTGTATACAAAGTTTTTTTCCCAAAGATGTTT TTATGTAAATTTTCTCTTCCTTTTGAATTGTGCAAAAAGAGTTTTTTAGAGAGTAAATTAAGCACTTAAA ACAATTTTGTTTACTCCCCCTCAGTTTGGCAATATAACATCTCATGTGTGAATCAATGTGTCGATATCGG TAAGGTGTTAAACAATGTGCTATTGTCTCTTGAAATCTGTGGAAAAACTGTATTGTCAAAATAATAATCT TGCATCGAATAACCTATGTGTATGTAATATACTGACAGATGACATAATGCAAATAAACTTAGTCTGTGGT AGTGAATGTATTGTAATCAAACTCAGCATTGTAGAATGTATGTGTGTTGAATCGTCCTACCCCTAACATA TTCTATGGATTTCGTGGCGTAGAAATATCTTATTCTGTCTTGCCCGTGTCGTCATGGAAATGTAGGTCGT CAGGTCGTCGTGATAGCAACCCCTTCCAACCCTGTACTGTACATAACAAACAGACATGTACTTCACACTT GTCGAGATCTTAAGATTCGAAAAATGAGCTCGAAAATGAGCCTCTAAAGTAAACCAACATTGTTGATTGT TTCCCCGCAGAATAATACCGGAGCTTCTTTCAATTGAGAAGGGTTTTTTTAATAACTTGATCAGAAGGCG TCGCTTGTCCCTGTGTCATGTTGATAATGGGCAATTCTTTTCGATATGTTTGACTGATTTTGTTTCCTAC AGCCTGTATGACATTTTGATAAATCCATTGTAGATATTCTCATTTTAAATCTGGAAACATTTTGCTTAAT GCATCTTAGAGAATAGGAAAATAATCACTATTTTAGGTCTTCCAGTTATGATGCGATAAGGAAAGCAAAC AAGCTTTGAAAGTCAATGTATGGGACCGTGGTTTAAAATAGGGGCAGGAATGTACGCAGATTTGTTTCCA TATTTCATTTTGATAAGCTATGATAGCTTCAAAGTAATGCTTCATTATGAGGGAAGATAAGCAATGGCTT TATTTTTCAAAGAGAGTTCAATTTGCTTTGAATTCTAAGAAAATGATATATAAATATCCATAAGGTCCAT GAAAGTTTGTTACATACAGGGGATGTGAAGGGGGATGAGTTTTAATAGGACTGCTAAAGTTAGATACTTA CTTGACATCTGTTCTTGTAAATTTACGGACAGAATTGCATCATGGGTAAATTAATATCACTCTAATGGTA GTCTTGTTTGCCGTTCTCCGAATGGATTGTGGGTAAGCGAGGCAACCATGATGGATGCAACTCTGTCTGT GATAGCTGCTCTGGTCTGGTTTAGAGCTGATCGTAGTAGTTTGTAGTAAAACAGTCAATGTTTGTGAACG AGTGTAGAATCAGTTGTTCATCTAGACTTAGTCATGCATATCAGAGGAAAGGAGAACGTTTGTGTTCCTG TGTCATTCATTGCAGATCATGTCTAAGAGAGAGAGAGAGAGAAATAGATTTACTTATCAGATAGCCAAAA TAGATTATTTAGATTTTATGACTATGTTGCTTCTACCTCAGATCTGTGTTTACGAATCAAAGGCTTGTAT TTAGAAAGACAGCTTCTCGTCTGGTTTCAGTTTGAGATTTATAAACAATCCAGAAAGATAGAGAGAATAT ATATGATTGTATGTTTGGGCCCAGTAGGGCGTGAACAAGAAGTTAACGCCCTCCTGGCTCCGAATAGACT TTTTCAACTTCAACAATATCTTTTCATAGATATTGACAGAGAAGCAAACCATTTTGGGGTTATAGCAACT CACTAACATTTGTCCTGTTATGACAATAAAGAGGTATGGTATAGACTGAACTGAATACACAGTGATAAAT AAGACAATTTTTTTTGTTACTCTGTGTTTATTCATTTTAGAATTTTTTTCTGGCTTGATAAACTTACATG GCCGCCAAGTCTTGTAATATCCTGTCAAAATTGAAAGACCATGGAAGTAAAAATGTCTCATGATATTTCC TTTAACTTTTGTAACTTGTGCCAAACTACAGAAGAGATTTATTTTACTTACCCTTTGAAATATTTTAACA GTTGCTTTGTTATAGATAAAGTTTGGATGAATTGATTATGTACCATGTTTTGTGTTTTAGTATTAGCATA TCCCTGGTAGCCCTGCACCAATCAAAACATCTCTTGTAGGCCTGAAATGAATATTCATGACTTCTGTGTT CTTCCTAATGTAAAGATTGACCAAAGCAGTTGATTAGTGGAATATTTTGTTCAATTTGTAAAGGGGCTTT AATGAATGATATAAAAGAAAGTTGTAGAAGAATTTCACAGAGTGTATTACTCCAATAGACTTAATTGCTA CCTCACAAACCAGTTTGTTTTGCTCAAAAATACCTCGTTATATGGACATATATTATTTCATTTTGACCCA CGTTTCCCTCAAAAAGAAATGAAATACTTTATCAAGGGTTTTTATTTTTGCCCTATAACGCTGTACAAAA AAGCTTTGCTTTGGTGCTCATATAGAGTATTTGACTGTGCTGATCCAATCAGAACTGAAATTGGCAAAAT ATACTGCGTTTTTAGTAAATATCTCCCGACTGATTTATATGATGAATATCTTCATAATAAATCTAATTCT TTCAAGTCTCAAAGCAGCTGAAGTGGCTGGATTGAATAACACAATCATTTGTTCTGTCTTTTAAACAATT TTGTTAATAATTTGATGTCATTTTGAATAGGTTTATTGTGTTGTATTCTACCATCTTATCAAAGGAGTAT GTGCTGTATTATGTACATAGTGTAATCTCTATACATTATGCACAACTTATGTGTTTATTTTTTAACAAAT AATTGTATTGTGAATAAAACAGTTTTATAATTATGATAATGCATTTCTATAATTTCATGTGTTTAGCTGT TACATTAATTTGGTTTTAATCTGAATAAGATTATGTTGTGGACAGTTTATTTATTTGTTAGTATGTTTT
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???blast.eval???
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???blast.eval.1???
???blast.eval.001???
???blast.eval.minus5???
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???blast.eval.minus50???
???blast.eval.minus100???
???blast.numalign???
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???blast.numalign.1???
???blast.numalign.5???
???blast.numalign.50???
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???blast.wordsize.15???
???blast.wordsize.default.message???
???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
???blast.filtering???
???blast.on???
???blast.off???
BLAST time is limited to 30 seconds