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Echinobase
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Echinobase Accession
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Echinoderm mRNA
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Echinoderm CDS
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
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BLAST Databases
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Download BLAST databases
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
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>JT116064.1 TSA: Strongylocentrotus purpuratus WHL22.231796.1 mRNA sequence GAAAGCGGTGACATCTACCAGTGTGTTCTACATAGCAGTGGGGGTGGTCTGTGGAATCATCCTTCTCTTT GTTTTAGTAGTAGCACTTATCCATGTCAGAACAATGAGATCATCTGATCCCGCAAGTAGTGATGCCAGTA GTACTGGGTTGATTAATGGAGGCAGACAACCAGAGCATCCAAACTTTCCCAAGATTCCTGAGCCAAAGGT CGACAGACTTTCTAATGGAAATGGTTACAACTCACTTCACTACCAGATCTGTCCTTCATTAGCAGAAGCT GAAGACTTGAGATTAAAACTAGCTCCGTATGCCATTGAGAGAAGCAGAATCACTCTTGGTGAAGTGCTGT TAGAAGGCACGTTTGGGCGTGTTCACCAAGGAGTGTTAATCAGTGCAACAGGAGATTCAGAACAAGATGT TTTCATCAAGACTGTAACAGATCATTCATCAGAAGAACAGCGCCATCTGTTGGTGAAAGAGAGTTGTCTC CTTCAAGGTCTGAGTCATAAGAACATCTTGCCATTGCTTCATGTGTGTTTCTCTGACCCTCCCTTCATCT TGGAGGCATTTATGAAGCTAGGAAATCTAAAACAGTTCCTCAAGAATGGACGCATTGGCCCAGGAGACAA GCATCAGGCAATATCAACTCGTGATCTAGTCCACCTTGCCATTCAGATCACACATGGAATGATGTATCTG GGTAAAAAGAGACTTGTTCATAAAGATCTGGCTACAAGGAATTGTGTGATTGATGAGGACTACAACTTGA AGATCACAGACAATGCTTTGTCAAGAGATCTTTTCCCTAGTGACTACCATTGTCTGGGGGATAATGAGAA CAGACCTGTTAAATGGATGGCTGTGGAATCCCTGGTTCATAAGAAATTCTCACATGCTAGTGATGTGTGG TCATTTGGAGTGACCCTTTGGGAGCTGGTCACCTTAGGTCAGACACCATACATGGACCTGGACCCGTTTG AGATGGCTACCTTCCTGAAGAGTGGTTATCGAATGCCTCAGCCCCCAAGCTGTCCAGATGAACTGTTCAA TCTGATGGCATGCTGCTGGGCTCTCTTGCCACAGGATAGACCCAAGTTTAGTCAGCTGTGTGCTGCCCTC ACAGACTTCCACCGTACACTCGGCATCTACATCTAAGCTTCCTCAAGCTAGCTTCTCAATGCCTCTCAGC TCAAAGCTCTAATCTTACTCACCAGAAAGTGGAGACCATGATGGATGCCTACACTCGGCATCTACATCTA AGCTTCCTCAAGCTTCATTCTCAATGCCTCTCAGCTCAAAGCTCTAATCTTACTCAACAGATAGTGGAGA CCATGATGGATGCCTACACTCGGCATCTACATCTAAGCTTCCTCAAGCTAGCTTCTCAATGCCTCTCAGC TCAAAGCTCTAATCTTACTCAACAGATAGTGGAGACCATGATGGATGCCTACACTCGGCATCTACATCTA AGCTTCCTCAAGCTTCATTCTCAATGCGGCCTCTCAGCTCAAAGCTCTAATCTTACTCAACAGAAAGTGG AGACCATGATGGATGCCTACACTCGGCATCTACATCTAAGCTTCCTCAAGCTTCATTCTCAATGCCTCTC AGCTCAAAGCTCTAATCTTACTCAACAGAAAGTGGAGACCATGATGGATGCCTACACTCTGCATCTACAT CTAAGCTTCCTCAAGCTTCATTCTCAATGCCTCTCAGCTCAAAGCTCTAATCTTACTCAACAGAAAGTGG AGACCATGATGGATGCCTACACTCTGCATCTACATCTAAGCTTCCTCAAGCTAGCTTCTCAATGCCTCTC AGCTCAAAGCTCTAATCTTACTCAACAGAAAGTGGAGACCATGATGGATGCCTACACTCGGCATCTACAT CTAAGCTTCCTCAAGCTTCATTCTCAATGCCTCTCAGCTCAAAGCTCTAATCTTACTCAACAGATAGTGG GGACCATGATGGATGCCTACACTCTGCATCTACATCTAAGCTTCCTCAAGCTTCATTCTCAATGCCTCTC AGCTCAAAGCTCTAATCTTACTCAACAGATAGTGGGGACCATGATGGATGCCTACACTCGGCATCTACAT CTAAGCTTCCTCAAGCTAGCTTCTCAATGCGGCCTCTCAGCTCAAAGCTCTAATCTTACTCAACAGAGAG TGAAGACCATGATGGATGCCTAACTTCTGTTTATGCAGACCTTAATGTGATGCAAAAGGAAGAGCAACAG TGAGGGGGTAATGTTGCAAAATGTCTGTTGTTTGGTGTGCAGTAGACTAGGTATGGAGCTGCTCTGAGTG TACCTCTTCTGATATTAATGTATTTTATAAATATGTAAGAAAAATAGTCATCCATGTATAGCTATTATGT AGACCAAATTGTGATGGTTGTCCTTTTATTCCACATTTTATTACAACTCTTGTTTTTCATTTTTCTAACT ACAACAATAATGCAAACAATGTAGAGTAATACAGTAAAGATGGTGTTGAAAATGTATCACAAATTGCTAA CTGCAATATAGTAGCTTTTAATCATTTGTGTGGGTAGTATAGAAAAGGCATTTGTTTATATTAGTTTGCT GATAATGTTTTTTATAATGTTCATATTTCCTGTAGGCTGTCGTTTACCCTACATTCTTAGTGAGCTTCAA AATATTAAAGATGAAAGTGAAAAGTCTCTATAACCTTATCTTATCTAATATTGAAGCGCATTTTGTGTGA GAGAAGAATTTATCTCTTCCTTTTCCCCTAAGAGGAAATTATGACATGAAATTGAATTTGAATAAATTAT GTAACAAATGAAAGAAATATGTAATTGAAAAGTACTAAAAAAACTTCAAAGAAAAAATAAGTTAATTGAT ATGTGTAAAGCCAAATAGAATCAACTAGAATATACTCTCATGTCTACTTGCAAATTCTCAGTACTGTTTT TAATATCAAACTATTACTTGCCCTACAGAATCCTATGTTTTCAAAGTCCTTTTTTTTACTTCATGATTAT GTTTATATAGATGTAAAATTGTAAGGATAAACCTTCTTAAAATCATGCCCAGGTGATATATTTATCTGTA TTAATGTTTGTGCTTTTAACCTAAATTCTCCTACTATGCATTTTATTTGTTTATAATCTAAATGATCCAC AACCTTTGTTTTGAAAACAACCACTTGCTAGGACTTAGTTTTGATAGGAAGGCAATGTTTTGTCTTTCCA TACTTTGTGCAGTTAATCTGTTTGTAAATATTTTAATATTTCTTTTGGTGCTTTAAGTTAACTGTGTTTC TATTGGTTGCTCTTAAGATACAATGTTTTGTTTATACCTGCTTGTATGTATTCACTGATGTAGCATAGAA AGCATAATGTATCCTGTGGATTACGTCCTGTACAATAGTACATGATAGGTCAACTACATATCGTCGGTGA GTTGACAAAACCTCGTATCTCAAAAATCATGAATTTTCAAGAGAGCAAAAAAACTTTCCTGTCTCAAGAA ATTTAGTGCTGTGACACCGTCCTTTCTTTTTAAAACTGGAATATTTATACAATTTTTAATGTCGTTGTTG AAATACAGTAAAATAATTGTTTTTATATTTATTATGCAAAAAAATCAAAATCTCAAAAAATTAAGATACG AGGTTTTGTCACCTCACCGACGATATAACTATAACATTAAGGGATAGAGCAACGACAATCTGGCGCTGCT CAGTGGCTGCCCTGTTCACGATCAATTGGGCAAAAAGAATTTCCATTTTCTGTTTAACTTAATAAAATTT GGAGTGGAAGAGTGAAGATTATTATTATTATTGTTATTATAAATTGTTGAAAAATCAATGAAGTTTTACA ATTTAATTATTCATTTCATATTGGTATCTGGGAAGAACCAATTATCATTTGGAATTTCTGATGAACACAC CATGTGAGACGGGAAAGATGTATTTGTCAAGACATACCAAGGATGCTGCGGTTGGTTGTCAACAATATAT GAAAACTTTTTGTTTTCAAAGGCTCACCGATAACTTATGCCCATATGTCCTACCCAGCTAAAATCACCAA ATATTAAAGTACAATTTGAATCGATAATTATCAAACAGGGTAGAAAAAGAATTTCTTACATGTTATAGAA AAGCTTTATTTGATAGTCTTGAAGCATGTAAATAATGCTGATTTTGTCATTTTAAAATGTTTATTGATAT ATGCTTGCAGGATTGCCAGCACTTTTTGATATATTTGTTGTAGAGAAGTTTATGCAAGTACATGTACATT TGTAAATCTTGATTGTAACAATGCACAAAGCTTTGGTAGTACCTATACAGACTGGTTTCCTATGAGTGAG AGATATGATGTGGTAGAGCATTGCCAAATAAATTCAATGTTGTATAAGTACAAGACACAAATTAAGTACA TGTAGATATCCTGTTCAAAGACGATTTGATAATGGGTGTAAGCATAACAGAGGATAAATGATTTGATTAT TGAAAGTTATGACAAATGCAACATATATATTTACATGTATTATTTCATGAAACATGGACCTGCTTGAGTA TGATTAGCTATAGCTGTTTAAAGGGATAGTTGGGTTTTGTTGCAGACGGCGCTACACAAAACAATTTTTT GTGAGATAAAGAAAAACTGAGTGTCAAATTTGAAAGTATATACAATTTAAATGACGAAATCATGTTTGTT AGATCTAAATCGGTTCAGAGTTGGCTGAAATATCCATAAAAATAACCATTTCTAATATTTGTGGTGCCAC ACAAATGTTCAGTAATTTTGAACCAGCCGTTGTAAAACGAGATGGCGCCTTATACGGTTTATTCCAGCCA ATGCAAATATTGGCTTTTTGTTGGTTATTATACATGTACGCTAACCATGCACTTTGAAGGTGTTTGTGGT CTTAAACAAGAACTCAACTATTCCTTTAAGATATAGGCAGTTCTCGTACTCAAATCTCATAGGATCTAGT GAAACAGATATTCAAAACTTATGATAACAAACATATTATATATGTCAAACAAATTGAGAGCTGTGTAGGA AGCTGAAAAGATTCAGAAATCTTGTCTGGTGAATGTAGACTCTTTCTTGTATGTGGTATTGCATCTTTCT AGTCCAAACAAATCTTATAATGACATGCAAACTCCCCTTTTTATATATGGATAATGCGTCTGATTAAATG ATTCTGATATTTTGTTTATGCATTTACTTTTTCAGAACTCAAAATTACCTGTTTTATTGATCCAAATGAA AGATTAATCTGCATTCTCAGTATAAAATTATAGTTTACTTTTTATCTACAGGGTAGATATATTTCATTTG ACTGCTACAATGGTACAACAGCAAACTGCTTGATTCTATTCTCATGAACTCAGCTGTAAAGCAGGGCTCC CACTTAGCCGAGTTGTATTAGCGAGTTAAGGTGAGT
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???blast.matrix???
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???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
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BLAST time is limited to 30 seconds