Click here to close
Hello! We notice that you are using Internet Explorer, which is not supported by Echinobase and may cause the site to display incorrectly. We suggest using a current version of
Chrome
,
FireFox
, or
Safari
.
Echinobase
???banner.login???
???banner.register???
Contact Us
Cite Echinobase
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
BLAST
Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
JBrowse2 Tracks
Genes
Gene Search
Gene Search Tips
Gene Nomenclature Guidelines
Gene Name Questions
Expression
Search Anatomy Items
Quantitative Expression Datasets and Plotting Tools
Anatomy & Development
Search Diseases
Echinobase Anatomical Ontology (ECAO)
L. variegatus
Atlas of Development (pdf)
Resources
Protocols, Reagents and Data on EchinoWiki
Resource for Developmental Regulatory Genomics
Davidson Lab Gene Regulatory Networks
Libraries, Vectors and Screening
BAC Table
???header.navigation.searchAntibodies???
???header.navigation.searchMorpholinos???
Guide RNAs (gRNA)
Cis-Regulatory Elements (CREs)
Literature
Papers
Books
Cite Echinobase
Community
Find People
Find a Lab
Organizations
Job Postings
Downloads
Data Download
Gene Page Reports
Browse Download Site
BLAST Databases
???blast.header???
Download BLAST databases
???blast.alignment???
???blast.program.blastn???
???blast.program.blastp???
???blast.program.blastx???
???blast.program.tblastx???
???blast.program.tblastn???
???blast.database???
-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_030992060.1 PREDICTED: Strongylocentrotus purpuratus ATPase MORC2A (LOC585114), transcript variant X2, mRNA TGAACACGCTCTGGGTCAGCTAGGTAGCAACGTAATTATCTCTTTGTCTTATACTGCTCACGAGGAGAAA ATTACAGAACGATCTGCCCAAACCAGGAGGCCGATGCGAGACAAGTGAGAAACCAATCAGAGTAAAGGAT TGGTGAAAGATAATATTCAACATAGGCCTACTGTCAGAAGGAACTGACGATGGCAACTGCAACGTATAAC TCTCTGAGTCGTGCTGGCTTGACATTCGAGTATCTACACACGAACTCAACAACGCACGAGTTTCTATTCG GAGCGCTCGCTGAACTTCTTGACAATGCCAGGGATGCAGAGGCAAGTCGTATGGATGTATACACAGAATT TGATGCGACAATGCGAGGTGGCTACGTATTATGTTTCCTCGATGATGGAACAGGAATGGACCCAAATGAT ACTGCATCCATAATCCAGTTTGGAAGGTCATCTAAGAGACTGCTTGATGGAAACTTGATAGGCCAGTATG GAAATGGACTGAAATCGGGTACGATGCGAATAGGGCGTGACTTCATCCTCTTCACCAAGAAGGGCGACAC AATGAGCTGTCTCTTGCTCTCAAGGACATTCCATGAACAGGAGAAGATAGAAGAAGTCATTGTCCCGATG CCATCATTCAATGCCGTCACGGGAACACCACTGATTGGTACCTCCGCTGCAGAGAAAGAAAGGCATCGAA TAGAAATGGATATTATACTCAAGTACTCACCGTTCCATACAGAGGAGGAAGTCTTTAGGCAATTCAGACA GATCAAAAACTCAGGTACTCTTGTCGTTGTGTATCATATGAAGCTGTTAGACAATGGAGAACCAGAACTT GATGTATTTTCTGATGACACAGACATTTTGATGGGAGGTGTTAATGCACAGGATATCACCTACGACAATG GCATGTACCCAGAAAGGTACTCTTTTCGGGCCTATGCAAGAATATTATATGCTGAACCCAAGATGAAGAT CTACATCCAGGGGCGCAAAGTGAGGACACGGAAACTCACATATGTCATGTATAAACCAAGGCTGTACAAA TATAGTTCAAATCGCTTCAAGAAGAGATCTGAGACTGATGCGGCAAAGGCTGGAGAAGCAGCAAAGCAAG CTAAGGAGAATGAAAGAGAAGCTGTGAGTAAACTCAAAGAACTAGAGATGAAATACAAGAACATCAATAC CAAAGACTCAAGAGCAAAGCTCCGGCAAGCACAGGCTCATGCCCAAGACATGAAAGAAGAGGCAGAGCTG AAACATAAAGTTGCTGATATCAAACAGAAGACGATGAAGGAACCAAAGACGTTAGACTTCATCTTTGGTG TCAACATTGAGAACCGACGCCAGCAGGGGATGTTCATCTACAACTGCGATCGTCTTGTAAAGATGTTTGA GAAAGTAGGGCCTCAGCAGGATGGGGGAGTCATGTGCAGCGGAGTCCTAGGCTATGTCAACATTCCTTAC ATAGTATTAGAGCCAACCCATAACAAACAGGACTTTGCTGACAACAAAGAATATCGTTTGTTGCTCAAGT CTCTAGGAGAACACATGATACAGTACTGGAAAGATATCAATATAGTGAACCAAGGTGTGTTGAAGTTCTG GGAGAGCTATGGTTATGTGAGTGCAAACTGGAAGGATCCTCCTTCACAAGATGCTAAATTCATTAGGAAA CGAGCCATGCAACTCCCAACAATGATACAATGCAATTCTTGCCTGAGATGGAGACAGCTTCCATTCTCTA CCAGTACCATTGGGATAGAGTATCCTGACAACTGGGAATGCTCTATGAACAAGGATACCACCCTCAATAA ATGCAGCAACCCCGAGAGGAAGCTGTCCATCCCTACGGGAACCATGAGGAAGGAGGTCAAAAGTGCAGAG GAAAAACAGAAGGATCTTGAAGAGGATATCAAGAGGAAGCAGCAGAAGCTTCAACAAATTGAAAGAACCA AAAAGCTGTCTTCAAGACAACGCCAGCGCTCTCCTTCTCCTCCATCATCGCCCTCTCCACCACCATCTCC TCAACCGAAGAGGAAAATGGCAAGGTCTACTCCGAAGCCAAGCCCAAAGCACACTCCAAAACAAAGTCCC AAACACATTCCAAAAGGAAAGGCCAAACCAATGCCCAAGCCTCAACCGAAGCCTCAACCAAAGCCTCAAC CAAAACCAGCTCCAAAGCCCAGAGAAGAGCTACCGGTAGTCACAAAGAAGTTTTCATCCAAGGTGAAACC CATTGGTAAAGCTTCGCCCGTTGTTCAACAGCGCCCAGTAAGCCCCAAACCCGCCAAGCGATCAGCTGCC ATCGCCCCAGCCAAGCGCCCCAGCCCTGCCCCTATCTCAAGCTCACCACAAGCTTCGGTCTCGGTCCTCT CAGTAGAGCCTAGTCCTAAGAAGAAGAGGAAAGTGAGTGAGTCGTCTCAAGACTCGCAGGAATCTGCAGA CACAACAGAGAAGAATGCAAACAGTGAGACAGACACAGAGCTGGAAGGAGTGGGGATTAAAGTTGAAACC TTGATCAAGGGTCAGTGGCACAAAGGTCATGTGGCAAAGGTCAGCAGAAAGCCAGACAGTGGAGACAAAT GGAAGGTCAAATTTGATGACCATCCCAAGGACAAGTTTGACAAATGGTATGATAAAGATAGCTCCGATCT TCGGTTACAGGGTAGTGAAGATTCTATGTCTTCACAAGACGACACATGCAATCAGGAAACAAACAAACCA GAAGAGAAGCCGGAAGAGAAGAAAGAAGAAGAGAAGAAGCCTGATAAGGAAACACCACATGAGGAACCAG ACAAAGAGGTGAAAGGAAAGGAGAAGGAAAAGAAGGAGAATGATGAGGAGAAGAAAAAGGAAAGTAAACC AAATGATGTAGCTGACTCGGTAGAACCAAAGGAAGAGATAGGGAAAGGAGACTCAAAAGGAAAGAGTACC GAGGAGGCAGGAGGGAGCTCAAATCCAGAGGAGGTGGAGAAATTGACCCAACTGAATGGCTCACTCTGTG ATGGTTTCAGGACATGTTTGAGGTATTTCCTTCCTCCAGAATGGACGATGTCCAAAGATGACATCAATGA TATGGACGCCAAGAAACTGACCGAGTTTCCACTTGACCATTTCTTTGACCACTATGAAAAGGGACTGCGA GATCTGGTTGGCAGATACCAGGTAAATGCTGAGGAGAAGGAAAAGGAGGCAGTAACAGCTCAGGGTAAAC TCAACAATCTTCGCAAGATGGTGGCACAACTCCTTTCAACATTACATGACACACAGGATGGTCTGTCAAT TGAGAGCATGAAAGGAGATGAAATTGACAACTTGCTGGCGGTTTGTTTGAAAGACCAAGATGCACAGGAC TCATGAGAGAGTGAGAGAGAGCATTCATCGAACACCACTTTGGAGAAACTTTGCTGTTTAAGGATGAAGT ACCCATACTAATCTGACATTCTCCAGTGCAGTGAAGGAGGCTGACTTTGAATCCCATTCATATGGATCTG TGTAACACCGGATGGCTTAAAAATTGCTGATATGTAACTAAATGATAGGTCTGGTGTCCTAGAAGGCCTG TCTCAAACAAAATGGAACCAGACCTTGTTGCTCTTGGAAGAGCATTACCAGGAACAAAGATGACTTATTG GTGCTTGAAGATGTGGATGCAGGACAGCGTTGAACATGCCAAATTTGAATTTATGGAATAACTTTGTGGT AATCCTAACCCTAGAGCCATTTTTAGTGTCTCGCCTTCATCTTTGGTGGGCGAGACAATAAAAGGGCTGT TTGGTTGTGATATTAAACAGTATTGACGGGGTTCAAGAGGTGTCCATCCCTTGTCCGTTTTCTGTCGCCT GTACAAAAAATGTTAGAGTTTTACCTGAAAGACTCTCAGATAC
???blast.query.upload???
???blast.options???
???blast.eval???
???blast.eval.01???
???blast.eval.10???
???blast.eval.1???
???blast.eval.001???
???blast.eval.minus5???
???blast.eval.minus25???
???blast.eval.minus50???
???blast.eval.minus100???
???blast.numalign???
???blast.numalign.25???
???blast.numalign.1???
???blast.numalign.5???
???blast.numalign.50???
???blast.numalign.100???
???blast.wordsize???
???blast.wordsize.default???
???blast.wordsize.2???
???blast.wordsize.3???
???blast.wordsize.4???
???blast.wordsize.5???
???blast.wordsize.6???
???blast.wordsize.7???
???blast.wordsize.8???
???blast.wordsize.9???
???blast.wordsize.10???
???blast.wordsize.11???
???blast.wordsize.12???
???blast.wordsize.13???
???blast.wordsize.14???
???blast.wordsize.15???
???blast.wordsize.default.message???
???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
???blast.filtering???
???blast.on???
???blast.off???
BLAST time is limited to 30 seconds