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Echinobase
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Echinobase Accession
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Echinoderm mRNA
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S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
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BLAST Databases
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Download BLAST databases
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_041625352.1 PREDICTED: Lytechinus variegatus ubiquitin carboxyl-terminal hydrolase 20-like (LOC121428597), transcript variant X1, mRNA GACTAGACTGATCACTGAAGTTCGATTTTCCTGGAATTTTCAGATGAAATGGCGAACTGGTGAGAATCGG CACTTGATTCTAAATTGCTTACTTTATGAGGCAATGAGATTTAGAGGGATCTGTTGAATCATGGGTAAGC CAGGAAAGCAGTGCCCTCATTCTACTACCGTAGAGAGATTCTTGCAAGAGCATCTTCAGGGCTTTAAACA GGGACGTTGCCGGGACTGCAGCACCAAAGGACCTAACCTGTGGTTGTGTTTAGAGGTTGGATGTCGCTAT GTCGGGTGTGGAGAATCAGCCAAAGATCACAGTTCTGAGCACTCGGAGAGTGCTGATCACAAACTGACCA TAAATCTTCAATCTCAACGCACCTGGTGCTACGACTGCGATTGCGAGGTCTTTCCCGATGTGCTCATCAA GACGAAGGCCAGCATGGGTGCAGATCATCCGAGGAGGAAGCAGGTCGGCGTCCCGGGACCGGAACGCATC ACCCATCCTCACCAGCATCACCGTCACCATGGCAACACTGAGGAGGAGGAGATGGAGCATTCAGGAGCAG CCGCAGCACCAGAATACTACCCTCAAATCCCTAGTTTCCGTACAGTAAGTACTCCAGTCACCCAGGCCCT GGATGAAATAGCACGAGACGAAACCAAACCAAGAGGCTTGACTGGACTGAGAAATCTTGGAAACACGTGC TACTTGAACGCGGGTATACAGGCTCTTTCAAATTGTCCGGCGTTTGCCCACTTCTTCTTGGAGTGTGGTG GCTTTGTGAAGACGGAGAAGAAGCCATACCTTGCAGCTGCGTACCAGAGGCTCATGGAAGACATATGGGG ACGCCGAAGACCTAGTTACCTAACTCCATCAAGTCTAGTCAACAGCGTGAAGGCAGTCTTCCCTATGTTC AAGGGATTTACACAGCAGGATTCACAAGAGTTCCTTCGATGCATCATGGATCGTCTCCATGAGGAGCTGA AGGAGCCGGTGTACCCGGAACCGGAGGATGACACTGATGAAGGCGTCAAGGACAGCATAGAGAAGGATCA GCAGACGGCGAGACGCCGCAACCGCGCGGGTTCCCCGTCCCTGGACACCCCCTACCACCGCACCCGTTCC AACGACTCCTTGAGCATCTCGGAGGAGATGGACTCAGGGAGCTTACCGGATAATGACCAGTACAACGCCC AAATGCAGGAGGATGCGGATGAGAGGACATCGCTCCATCATGGTGCTTCGGCAGGAGGCGAGGAACCCAG GATCCATGGGGTTGATAAGAATCATCCACATCGGAAGAGGACAACGGATTCCTTCTCGGAGACAGAGCCA CTTCATCCTAACCCTGTACCAAGAGTTAATAGCCGAACACGCACCACGTCATCATCTAGCGTCAAGTATG ATCGGGAGATGTACGATAGTGAGAAGGATATTGATGAGATGGCTTCAGGGGACCAAGGAATGAACACAAG CAGAGAGCATGTTAAGAAGAAGAAACAGTCCCCAAAATATCGTAGCATCATATCTGATGTGTTTGATGGC AAGATCCTAAGCTCAGTGCAATGTCTCACTTGTGAAAATGTGTCTTGTCAAAAGGAGACGTTCCAGGACC TGTCCCTGCCCATCCCAGGGAAGGAGGACCTGGCCCGGATCCAGGGGATGCCTAACAAGTCCACGGTCTC GTGTGCAGACACTCATCGGAATGCAGGATGGATGGCATGGTTTTATAGCTTCTTACCAGTGAGCTGGTTA TGGGGTCCTAATATCACCCTTGATAATTGCTTGGCTGCATTCTTCTCTGCAGATGAACTCAAAGGTGACA ACATGTACAGCTGTGAAAAATGTAAAAAATTAAGAAATGGGGTAAAGTACGTGCAAGTCCTGGAACTCCC AGAAGTCCTCTGCGTCCATCTGAAGCGGTTCCGTCACGAATCCTTTACCTCCTACTCCTCCAAGATAAAC AGCTATGTCTCCTTCCCGCTGGACAGCCTGGACATGACTCCATACCTTGCAAAAGATTGCAAGAATAAGT GTGCTACCTATGATCTGAGCGCTGTTATATGCCATCATGGTACAGCAGGAGGCGGTCACTATACAAGCTA TGCTGTCAATTGGCTAAATGGTCAGTGGTACGAGTATGATGATATTTACGTCACCGAGGTCAGCCCGCTC CAGGTCGCCAACTGTGAAGCCTATGTACTTTTCTACAAAAAGACATCTGAAGAAGCCATAAGAGAGAGAC AGAAAGTAATTGACTTATTCGAACAAGAAGAGCCAAGCTTTCTTCACTTCTATGTATCTCTCCAATGGCT GAACAAACTGAACAATTTTGCCGAACCTGGGCCGATCACCAATCACGACTTCCTATGTAAACATGGAGGA GTGCAACCCAGCAAGGCAAGCTACGTGGACAAATTAGTTCTAAAGATACCGCAGCCAGTGTGGGATCATC TCTACCGAACGTTTGGTGGAGGGCCGGCTGTCAATCGTTTGTCCCCATGCTCTGTCTGCCAAGCTGAGAT GGAGTTATTAGAGAGAAGGAGGAAGGAAGAAATGGATACATTCATCACAATGAATGAAGAGTTTCAACAG GACGAGTCCACCAACACCTCCGTCTACTGCATCAGCCTGGCGTGGTTCAAGCAATGGGAAGCATTTGTCA AAGCCAAGCAAGCCGAACCTCCCGGCCCGATCGACAATAAACTTATCGCAGTGACAAAGAGTGGCTACAC AACTTTAAAACAAGGAGCTGATTCAGGTCAGATCTCAGAGGCCATGTGGGAATATCTTCATGGAATCTAT GATGGTGGCCCTGAAGTGGTCCTAAGACCCAACCCTCCTGCCATCGCAGAACACCCCTCTACAGGAGTCG GGGGTAGGGGTGAGGAAGGGGCACCTACAGGTAGCAGCGGCCCCAGAGAAGAAATGTCCTGAAAGCACCG TGCTTGACTGTCTGACTTTTGATTTTGTGAGCTACATTTTGTTTTAATCTTCACTCAATGAGATCATTCT GAATTGAAGGTGTTGATAGTTGTTCCTGGATCAACACTTATGGGAATGGGCAATGGAATATCTACTGGTA GCAGTGACCCCTGAGAAGGACCACCCAGTATTGGCTGACAGTGTCGAGAGAAACATTCATCTCAAGTCTT CTTTAGTGGAAACTGGCAATCATTCCTGGATATCCCTATTCTTTGGAAGAGAGGTTGCTTACTGGTAACA GTGGCCATTAAGAAGTGTCCTAAATCATAATAATGATAATAATAGCTGGTTCTTATAGAGTGCTTTTTGC CTGAGGATACAAAGCGCTGCTATTATTACCCGGCTTTAGTTTGAGCTACTATCACCGGTGCTCAGTGCAT GAAAAGAAGTAATCTGGCCGGGTACCCATTCACCGTACCTGGGTCGAGTGCAGCACAGCGAGAATAAATT TCTTGCTGAAGGAAAACCTGCCATGGCTAGGATTTTTATTCGAGCCCACGACCCTCTGTTTGAAAGGTGC GAGACAGAACCACTAGACCTTGACGTGATAAATATAGAGAACAGCATGTTTCTAAACCAGTTGAATTCTT CACGAGTTGAAAAAAGGTTGTTCGTAATATGATTCCTGTGAACGACGTGTATGCTTTCATTTGAGCAGTG CCAATAGTGGTCGTCAAGCTACAGAGATTGCTAAAGGATAATAGATGTGTTTTTGCCGGAATGTAGATAC CTGAACGTCGCGCTATTCTAGTGGGGGAATGGCACGGAAAAAAAACAATGGGCTCGATGATTGAATCTGT GCCAGTGAAATCTGCTTCTTTCATGCAGTGATGAAGGTATAATAAAAAGATTCTTGCCTTATATTCCCCT TCGGGGCCCTCTAACATAAAGGTTTGGAATACTAGTAAATTGTTAGTTTGGAGAGAATAATTCTGATTGG TTATTTGTCAGTCGTGGCTATCATTGGCCATTGACGTTTTACATGGATTACAGCAATTGATTCTAATGTT GTTGATGTATTTTTTTTTTCATTAGTATTACTGTTAAAAATTTCAAATAGGTACTTGTGATTAATGAAAC ATGATGTGCAAATTGTTTACATAGACCAACATGCAGTTCAAAAGTCTGGAGATTTAAAGGAAAACCCTGT TTGTGATCGTATGGCAATTGGCCTATTTACTAAGTGATTCAAATTTATGCAAGTTTCTATCGTCTTAAGC TAGTGATGAGGTAAAATTCATTTCTGATACTTGGGCCCGTATTCTTAAGCTGGGTTTAACTTAAACTCAG GTTTAAAGTTGTGGTTTAAGTATGGATAGCCAATTGTTTCATAAATCACTAACAGTAGAGATGTAATATT TCATGTCATTTCGGCTCTCAAATCGTTCATGATTGTGTGGTATAAATAGATGATTGTCTTCACCATCGAT GAATCAGGAAAGAGTACAGTAAACATAAAAAACATACAACTTAATAAAAATTTTGGCACTTTTGGCTTCC CATAATTTTAGCACAGAGTTAGACCATGGTCTAAGTTATACCTGACTTCAGAGAATATGGGCCATGGAGT CCAGTGTGCATCCATAAGTTACTGCTATGTCAGACAGGCCTCTGGCAGGCTAATTAAAGTATGCATGAAA TGTTTGCAATATGTTAGTAAACAGTTCTAATATAATATTATAATTATTAACGATAATAATAAAGATAACT ACTTTTTTTCAATAATGACCTTGATTTCATCATTCTGTCATCATTTTAGATGCAATTTCAAGCATTTAAT TATAAGTTTGTAATGATACAAGATTATAATACACCCAGAAATTGTTTTAAACAGCCATTTAGAAAAGTTA ACAAGCTAAGTCTCATCAGTTTTTAGTATGAAATGTTTGGCACTATTATAGAAAACAAAATTCAAGAAGA TTACAACTATTGAATCCATATTTTTATTCTTTGTGTGTGTGTGTTTCAAAGACAAAAAGAAGACTTAAAC ATTTTAAATTGTCCGGACACCCCAGCCCCATCCTACATGTACTTGAATAATTTTTGCGTTATATGAATTT ATACAAGTGAATTCGGGGGAAAGTTCATGAAACAAATGGTCAGTGATTTTTGCTGGCTATTGTTTTAAGC TACTGAAATCCTTGCATCTGATTGGTTGTGAGTCAATGAAAATCACTGCCAGGTCTGTGCATGAAACACT CCCCTGAATATGAGAATCCATAATCCTGTATTCAAACACATGATAATATGCTGAAGAAATATATATATAT TCTTTAAGTTAGTCAGGATTTTAATATGTTTTTATGAATAAAAACTCAAAGCACCCTACAAAGCTTTGAA AAGAAAGTTTCTTAGTTCAAGTATGTGATTTGTTGATATACTTGTTTATCAAACATTTGTTTTGTAACAA AATTGTATACTCATTGTGACTATATCTTGTTAGCTGTATGTTGACCTATACACATTCTCAAAGTTTATTG GTGTGGGCCATTCACATATGGTCATTCGACTATGTTCTGTAATGTGTACTGTGAGTTAGTAACATAACGT AAAAAGTCGCTAAAACCTCTTGACAACCAAGTGTAAAAGGGGCTCTGTTTTTTGATGAATGTGACAATGA TCACACATCGATGATTTCTTGGTTTAAGTTGTGAGGCCTCTGTGTGTCTTACCATTCAATCATTGTGCCA TATTTAATGTTTTGCATGATGTATATGTGTCACTCTGCACTCTTTAGGACTGCCGAGATGTACAGTATGA ACAAAAGTGATAAATGTTACGAACTAATTTAGTTTTTAATTTCATGAAGTATATATTTATGTTTCTCCTC ACAATTATCAAGCAATCCATATGTAAAATGTTATAGAAGGTGGGTCATTTTTTGAAATTGATTTCCGATT TCCCTGCCCCAACACTCCCTTTCTTCCCCCCCCCCCCTTGTCTCTTTCTCTCTCACATATTTTACACTTA CCGATCCATAATGATTTCTTATAGATTTATTGATTTACACTGCCCATTGCCACTCATCAAATGGTCTGCA GCTGTGTTACTTTGGAAAAGTTTTTCACATTTAAACTTCACCAATATTTTGTTTCCGATATGTGAAAATG TTTTTGTCACTTTCGAATTTATTACTATGTATGGATTTCTTTTAATAGCTTTTTACATGTTTTTCCTTCT ATTTATTCCAATATAGGCCAATGTGTTTCACAGTTCAGCAAATGCTCCAATCTATCTATGATAACAAATT TGTTATTTTAAAAAAAGTATTTTAAGTCTGTAATATCGAATTGTGATCCTGATTTTTGTCAATGAAATCT AAACTTTTTATCCATTATTCCAAATTATTTGTACAGATGGAATTATTTATTGATTTTATTAAAAGCTACA AAGACATGTGGTTCTGTGCTATAA
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???blast.matrix???
???blast.matrix.blosum62???
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???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
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BLAST time is limited to 30 seconds