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Echinobase
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Echinobase Accession
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Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
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BLAST Databases
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Download BLAST databases
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_041625354.1 PREDICTED: Lytechinus variegatus ubiquitin carboxyl-terminal hydrolase 20-like (LOC121428597), transcript variant X2, mRNA ACTCTATCATCAAAAAGACTAGACTGATCACTGAAGTTCGATTTTCCTGGAATTTTCAGATGAAATGGCG AACTGATTTAGAGGGATCTGTTGAATCATGGGTAAGCCAGGAAAGCAGTGCCCTCATTCTACTACCGTAG AGAGATTCTTGCAAGAGCATCTTCAGGGCTTTAAACAGGGACGTTGCCGGGACTGCAGCACCAAAGGACC TAACCTGTGGTTGTGTTTAGAGGTTGGATGTCGCTATGTCGGGTGTGGAGAATCAGCCAAAGATCACAGT TCTGAGCACTCGGAGAGTGCTGATCACAAACTGACCATAAATCTTCAATCTCAACGCACCTGGTGCTACG ACTGCGATTGCGAGGTCTTTCCCGATGTGCTCATCAAGACGAAGGCCAGCATGGGTGCAGATCATCCGAG GAGGAAGCAGGTCGGCGTCCCGGGACCGGAACGCATCACCCATCCTCACCAGCATCACCGTCACCATGGC AACACTGAGGAGGAGGAGATGGAGCATTCAGGAGCAGCCGCAGCACCAGAATACTACCCTCAAATCCCTA GTTTCCGTACAGTAAGTACTCCAGTCACCCAGGCCCTGGATGAAATAGCACGAGACGAAACCAAACCAAG AGGCTTGACTGGACTGAGAAATCTTGGAAACACGTGCTACTTGAACGCGGGTATACAGGCTCTTTCAAAT TGTCCGGCGTTTGCCCACTTCTTCTTGGAGTGTGGTGGCTTTGTGAAGACGGAGAAGAAGCCATACCTTG CAGCTGCGTACCAGAGGCTCATGGAAGACATATGGGGACGCCGAAGACCTAGTTACCTAACTCCATCAAG TCTAGTCAACAGCGTGAAGGCAGTCTTCCCTATGTTCAAGGGATTTACACAGCAGGATTCACAAGAGTTC CTTCGATGCATCATGGATCGTCTCCATGAGGAGCTGAAGGAGCCGGTGTACCCGGAACCGGAGGATGACA CTGATGAAGGCGTCAAGGACAGCATAGAGAAGGATCAGCAGACGGCGAGACGCCGCAACCGCGCGGGTTC CCCGTCCCTGGACACCCCCTACCACCGCACCCGTTCCAACGACTCCTTGAGCATCTCGGAGGAGATGGAC TCAGGGAGCTTACCGGATAATGACCAGTACAACGCCCAAATGCAGGAGGATGCGGATGAGAGGACATCGC TCCATCATGGTGCTTCGGCAGGAGGCGAGGAACCCAGGATCCATGGGGTTGATAAGAATCATCCACATCG GAAGAGGACAACGGATTCCTTCTCGGAGACAGAGCCACTTCATCCTAACCCTGTACCAAGAGTTAATAGC CGAACACGCACCACGTCATCATCTAGCGTCAAGTATGATCGGGAGATGTACGATAGTGAGAAGGATATTG ATGAGATGGCTTCAGGGGACCAAGGAATGAACACAAGCAGAGAGCATGTTAAGAAGAAGAAACAGTCCCC AAAATATCGTAGCATCATATCTGATGTGTTTGATGGCAAGATCCTAAGCTCAGTGCAATGTCTCACTTGT GAAAATGTGTCTTGTCAAAAGGAGACGTTCCAGGACCTGTCCCTGCCCATCCCAGGGAAGGAGGACCTGG CCCGGATCCAGGGGATGCCTAACAAGTCCACGGTCTCGTGTGCAGACACTCATCGGAATGCAGGATGGAT GGCATGGTTTTATAGCTTCTTACCAGTGAGCTGGTTATGGGGTCCTAATATCACCCTTGATAATTGCTTG GCTGCATTCTTCTCTGCAGATGAACTCAAAGGTGACAACATGTACAGCTGTGAAAAATGTAAAAAATTAA GAAATGGGGTAAAGTACGTGCAAGTCCTGGAACTCCCAGAAGTCCTCTGCGTCCATCTGAAGCGGTTCCG TCACGAATCCTTTACCTCCTACTCCTCCAAGATAAACAGCTATGTCTCCTTCCCGCTGGACAGCCTGGAC ATGACTCCATACCTTGCAAAAGATTGCAAGAATAAGTGTGCTACCTATGATCTGAGCGCTGTTATATGCC ATCATGGTACAGCAGGAGGCGGTCACTATACAAGCTATGCTGTCAATTGGCTAAATGGTCAGTGGTACGA GTATGATGATATTTACGTCACCGAGGTCAGCCCGCTCCAGGTCGCCAACTGTGAAGCCTATGTACTTTTC TACAAAAAGACATCTGAAGAAGCCATAAGAGAGAGACAGAAAGTAATTGACTTATTCGAACAAGAAGAGC CAAGCTTTCTTCACTTCTATGTATCTCTCCAATGGCTGAACAAACTGAACAATTTTGCCGAACCTGGGCC GATCACCAATCACGACTTCCTATGTAAACATGGAGGAGTGCAACCCAGCAAGGCAAGCTACGTGGACAAA TTAGTTCTAAAGATACCGCAGCCAGTGTGGGATCATCTCTACCGAACGTTTGGTGGAGGGCCGGCTGTCA ATCGTTTGTCCCCATGCTCTGTCTGCCAAGCTGAGATGGAGTTATTAGAGAGAAGGAGGAAGGAAGAAAT GGATACATTCATCACAATGAATGAAGAGTTTCAACAGGACGAGTCCACCAACACCTCCGTCTACTGCATC AGCCTGGCGTGGTTCAAGCAATGGGAAGCATTTGTCAAAGCCAAGCAAGCCGAACCTCCCGGCCCGATCG ACAATAAACTTATCGCAGTGACAAAGAGTGGCTACACAACTTTAAAACAAGGAGCTGATTCAGGTCAGAT CTCAGAGGCCATGTGGGAATATCTTCATGGAATCTATGATGGTGGCCCTGAAGTGGTCCTAAGACCCAAC CCTCCTGCCATCGCAGAACACCCCTCTACAGGAGTCGGGGGTAGGGGTGAGGAAGGGGCACCTACAGGTA GCAGCGGCCCCAGAGAAGAAATGTCCTGAAAGCACCGTGCTTGACTGTCTGACTTTTGATTTTGTGAGCT ACATTTTGTTTTAATCTTCACTCAATGAGATCATTCTGAATTGAAGGTGTTGATAGTTGTTCCTGGATCA ACACTTATGGGAATGGGCAATGGAATATCTACTGGTAGCAGTGACCCCTGAGAAGGACCACCCAGTATTG GCTGACAGTGTCGAGAGAAACATTCATCTCAAGTCTTCTTTAGTGGAAACTGGCAATCATTCCTGGATAT CCCTATTCTTTGGAAGAGAGGTTGCTTACTGGTAACAGTGGCCATTAAGAAGTGTCCTAAATCATAATAA TGATAATAATAGCTGGTTCTTATAGAGTGCTTTTTGCCTGAGGATACAAAGCGCTGCTATTATTACCCGG CTTTAGTTTGAGCTACTATCACCGGTGCTCAGTGCATGAAAAGAAGTAATCTGGCCGGGTACCCATTCAC CGTACCTGGGTCGAGTGCAGCACAGCGAGAATAAATTTCTTGCTGAAGGAAAACCTGCCATGGCTAGGAT TTTTATTCGAGCCCACGACCCTCTGTTTGAAAGGTGCGAGACAGAACCACTAGACCTTGACGTGATAAAT ATAGAGAACAGCATGTTTCTAAACCAGTTGAATTCTTCACGAGTTGAAAAAAGGTTGTTCGTAATATGAT TCCTGTGAACGACGTGTATGCTTTCATTTGAGCAGTGCCAATAGTGGTCGTCAAGCTACAGAGATTGCTA AAGGATAATAGATGTGTTTTTGCCGGAATGTAGATACCTGAACGTCGCGCTATTCTAGTGGGGGAATGGC ACGGAAAAAAAACAATGGGCTCGATGATTGAATCTGTGCCAGTGAAATCTGCTTCTTTCATGCAGTGATG AAGGTATAATAAAAAGATTCTTGCCTTATATTCCCCTTCGGGGCCCTCTAACATAAAGGTTTGGAATACT AGTAAATTGTTAGTTTGGAGAGAATAATTCTGATTGGTTATTTGTCAGTCGTGGCTATCATTGGCCATTG ACGTTTTACATGGATTACAGCAATTGATTCTAATGTTGTTGATGTATTTTTTTTTTCATTAGTATTACTG TTAAAAATTTCAAATAGGTACTTGTGATTAATGAAACATGATGTGCAAATTGTTTACATAGACCAACATG CAGTTCAAAAGTCTGGAGATTTAAAGGAAAACCCTGTTTGTGATCGTATGGCAATTGGCCTATTTACTAA GTGATTCAAATTTATGCAAGTTTCTATCGTCTTAAGCTAGTGATGAGGTAAAATTCATTTCTGATACTTG GGCCCGTATTCTTAAGCTGGGTTTAACTTAAACTCAGGTTTAAAGTTGTGGTTTAAGTATGGATAGCCAA TTGTTTCATAAATCACTAACAGTAGAGATGTAATATTTCATGTCATTTCGGCTCTCAAATCGTTCATGAT TGTGTGGTATAAATAGATGATTGTCTTCACCATCGATGAATCAGGAAAGAGTACAGTAAACATAAAAAAC ATACAACTTAATAAAAATTTTGGCACTTTTGGCTTCCCATAATTTTAGCACAGAGTTAGACCATGGTCTA AGTTATACCTGACTTCAGAGAATATGGGCCATGGAGTCCAGTGTGCATCCATAAGTTACTGCTATGTCAG ACAGGCCTCTGGCAGGCTAATTAAAGTATGCATGAAATGTTTGCAATATGTTAGTAAACAGTTCTAATAT AATATTATAATTATTAACGATAATAATAAAGATAACTACTTTTTTTCAATAATGACCTTGATTTCATCAT TCTGTCATCATTTTAGATGCAATTTCAAGCATTTAATTATAAGTTTGTAATGATACAAGATTATAATACA CCCAGAAATTGTTTTAAACAGCCATTTAGAAAAGTTAACAAGCTAAGTCTCATCAGTTTTTAGTATGAAA TGTTTGGCACTATTATAGAAAACAAAATTCAAGAAGATTACAACTATTGAATCCATATTTTTATTCTTTG TGTGTGTGTGTTTCAAAGACAAAAAGAAGACTTAAACATTTTAAATTGTCCGGACACCCCAGCCCCATCC TACATGTACTTGAATAATTTTTGCGTTATATGAATTTATACAAGTGAATTCGGGGGAAAGTTCATGAAAC AAATGGTCAGTGATTTTTGCTGGCTATTGTTTTAAGCTACTGAAATCCTTGCATCTGATTGGTTGTGAGT CAATGAAAATCACTGCCAGGTCTGTGCATGAAACACTCCCCTGAATATGAGAATCCATAATCCTGTATTC AAACACATGATAATATGCTGAAGAAATATATATATATTCTTTAAGTTAGTCAGGATTTTAATATGTTTTT ATGAATAAAAACTCAAAGCACCCTACAAAGCTTTGAAAAGAAAGTTTCTTAGTTCAAGTATGTGATTTGT TGATATACTTGTTTATCAAACATTTGTTTTGTAACAAAATTGTATACTCATTGTGACTATATCTTGTTAG CTGTATGTTGACCTATACACATTCTCAAAGTTTATTGGTGTGGGCCATTCACATATGGTCATTCGACTAT GTTCTGTAATGTGTACTGTGAGTTAGTAACATAACGTAAAAAGTCGCTAAAACCTCTTGACAACCAAGTG TAAAAGGGGCTCTGTTTTTTGATGAATGTGACAATGATCACACATCGATGATTTCTTGGTTTAAGTTGTG AGGCCTCTGTGTGTCTTACCATTCAATCATTGTGCCATATTTAATGTTTTGCATGATGTATATGTGTCAC TCTGCACTCTTTAGGACTGCCGAGATGTACAGTATGAACAAAAGTGATAAATGTTACGAACTAATTTAGT TTTTAATTTCATGAAGTATATATTTATGTTTCTCCTCACAATTATCAAGCAATCCATATGTAAAATGTTA TAGAAGGTGGGTCATTTTTTGAAATTGATTTCCGATTTCCCTGCCCCAACACTCCCTTTCTTCCCCCCCC CCCCTTGTCTCTTTCTCTCTCACATATTTTACACTTACCGATCCATAATGATTTCTTATAGATTTATTGA TTTACACTGCCCATTGCCACTCATCAAATGGTCTGCAGCTGTGTTACTTTGGAAAAGTTTTTCACATTTA AACTTCACCAATATTTTGTTTCCGATATGTGAAAATGTTTTTGTCACTTTCGAATTTATTACTATGTATG GATTTCTTTTAATAGCTTTTTACATGTTTTTCCTTCTATTTATTCCAATATAGGCCAATGTGTTTCACAG TTCAGCAAATGCTCCAATCTATCTATGATAACAAATTTGTTATTTTAAAAAAAGTATTTTAAGTCTGTAA TATCGAATTGTGATCCTGATTTTTGTCAATGAAATCTAAACTTTTTATCCATTATTCCAAATTATTTGTA CAGATGGAATTATTTATTGATTTTATTAAAAGCTACAAAGACATGTGGTTCTGTGCTATAA
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???blast.matrix???
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???blast.matrix.pam30???
???blast.matrix.pam70???
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Automatically set to False for sequences longer than 4500 bytes
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BLAST time is limited to 30 seconds