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Echinobase
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Echinobase Accession
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Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
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BLAST Databases
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Download BLAST databases
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_011684601.2 PREDICTED: Strongylocentrotus purpuratus rho GTPase-activating protein 17 (LOC592564), transcript variant X2, mRNA CAGCAGTGCACTGCATGCATGCAAAGCAATGGTATTTTGGACCTTGTGAGGAAATGGTACTTTACGTGTA TTTTGTATGGCAGCTTTCGTTGTTTTGGAATCTTAACCTGCATGAGCTGCTCCCTATGAACACTTAATTT TGCCGCAAACAACATCACTGTGGCGGTTGCCACCTGATACCTTGGAATCTATTGCTTTTCTGAATTGTAG TTTTGGGAATCGACAGGAAAGATGATCAAAAAAAGTGACATTATGAGGCGGCAGATGAACCGTCTGAAAC AGCGGGCGAACCAGAACTTGGGAAGAGCGGAGAAAACAGAAGTACTGAATGATGAATTATTACAATGTGA GAAACGGACGGAACATATCAAGCACACATGTCAGAACATCACAAAGAAGCTCTCAGGATGTCTTATCGGC TCAGGCACAGATGTGGAGAAAAGAACGAAAAAGCTTCCACATTCTGTGCTATCACAGAGTATGGGTGAAA TGAGCACAGAGTTAGGTGAAACTACATTACTGGGATCTATGTTGGTGAAGACTTCAGAAGCATGTGCTAA CATAGCCCAGGAACTCACTAGTCATGAAATGGGTCTAGAAAACCTGATCCTCATTCCATTCAACTCAGTC CTAGAGGAAAGCATCCCTCAAATCCAGAGCAATAAAAGGAGATTAGTCAGACTGACTCTGGATCTGGACT CAGCAAAAACCAGGTTCCACAATGCTTCCAGGCAAACAGGATTAGGGAAAGGCAACTTCCAGGAGCAAGC AGCCAAGATAGATGCCATCAAGGAAGAACAGGATGATGCCCAGACAAAAGTAGAACAATGCAAGGATGCA TTAGTGACGGACATGCTGAATCTAGTCTCCAAAGAAAGTCTTCTGTCCAGGAGTCTAATGGATATGGTAG CAGCCCAGGCCCAGTACCATCGCAATGCCCTGGCCAGACTTGAGAACATGGTTCCCAAGATGAAGGAGAC CCTGGACCGGGACCAGCACAAGCCCACGTTTGGGACCCACCTGGAGGAGCACCTGAGGCTCCAGGACCGG GAGATCGCCGCCCCCATCGAGGTCCTCATCACGTGGCTCCTGGAGCTGGGCATCGAGGAGGAGGGGCTCT TCAGGTTGGGCGGGGCCCAATCAAAGATGAAACTTCTCAAGGCTGCGTTTGATGCCAACATAGAACTTGA TTTGGTGGACTTTGAATTCCAAGAACACTCCATTGCAGCTGTACTAAAGCTGTATTTGAGAGAACTTCCA GCTCCTCTATTGACCTTTGACCTCTACACTGACTTCATCGAAGCCGGCAGCCAAAAGGATCCTAATCAGA AGAAGGAAGCGTTGAAGAAGGTCGTCAGTAGGCTCCCAAAGGCCCACTTTGATAACTTAAAGTACCTATG TCGATTCTTGAATCTGGTTGCTGACAAGAGTGATAAGAACAAGATGACGTCCTCCAATCTCTCTCTCGTC ATAGCGCCCAACATGCTCTGGTCGGAAAAGGATGACTTAGGGACATCGCTAGCAGCAGCGCCAGGCATCG TCGATTCCTTCATCACACATGCAGAATGGTACTTTCCCGGAGAGATGGATTTCCCGACGCCATTGCCTCC AACAACACCCTCACCGAAAAGCAACTCGTTTCCAGACACCAACTCGTACCCGCTGAAGAGCCCCGACGGG ACCGCGCCTTCTCTGGTACCTGCATCCAACACCACATCAACCCATTCCATTCCTTCATCGCACCCTCCCC TAGGGCCCCCACCCGGTCCCCCTCCAGGCCCTCCGCCCAACCCCCCTACAGCCATTCCACCCCCTCCCTC TCAGACAGCACCTTTGGTCACCATAGACGGCGTCGGTCCTCCCGCACCGGCTGACAAACCCCTCAGAAAT TCCACACTTCCTAGGAAGTCAGTGAAAAGAGTCCACGCCCCTCCCCCACCCGTCAGTGTCTCACCGGTCC CCTCCCCGACGAACAGCCTGACACGGAACACCCAACCCCCGGGAGCCCCCCAGCCATCTAATCAGAACAC TCAAAACAATCACAATAGTCCTGAGTTAACAAGAAAACTAAGCGACGCGAGCTCGCTTTCCACGAATGGC ACGGTAACCAAACCGGAGCGCCCTCCCGACAAGCCCCCCATCGCGGGGAAGCCCCCCAAGAGCGAGAAGC CGATCGTCTCGTGGAAGCCTGTCCCCGCCGACAAACCACCCGTCACCGACAAACCCACCAAGCCCGAGAA GCCTGTAGTTCCAGTACCTAGTCCTACCAAGGAGCGTCCGGGGTCAGGGCGGGACAGTATCGACGGGACG GGCCTGTCTCCGAACCCCCCTTCACCAAATAGCAAACCAAAATCGGCAGCGATTCAAAGGCCTACGATGT TACCCCCTCCTCCGCCACCTACTGCATTGGAAAAGAAGGATGGTATAAATACCCAAAGTAGTTTTGATAC GGACTTGTGACAAGGTCAAGCCACAATCTAGCTATATTTAGAGATACTTTCAAGTTGCCACACTTATTTT TACTTCAGCATCACTTCATAGTTGTCCAGATTACGTATGCGAAGAACACATCTAGATCCAGTCAACCAAT ATCACCAACTTACTGAGGATGGCAAGACTTTACCGGCTCTGTATGACTTAGTCAGTATTTTTGACAGGTT CAAGAGTCGATTCTTCACATTGTTGGGATATTAGTATACTTTCATGAAAGAAGGAAGATATTGTTTCTCT TTTAAGGTATTTTGCATTTTTCACGATAAACTATGTATAAGGGTATATATATATGCTAGGAACACGGTAA TGCACATGGCAGTCAACTTGTGCAAATCATTTTGACAGTGTAGGCAAATTGGGCAATCTTTGTTATACCT GTGAACACAACTGAATCATGTCATGAAGATATATAGTTGATGAATATACTGAATATACTATGTGTACAGA AATATGAAACTATATCTTTTGAGATCAAATATTGATGTTCATGTTACATGTATGTGAGATATTTATTGAT AATAGATTGGGGTCATGCTGCATATGTTTTAGGAGTGTATTTTTGTTGGTATCTTTGCTTTTGGTTTTGT TCATGCAAATAATTGTTGACAAATTTGACAATCTACATGTATAGAATTTGATGTTATTTTCACGACTTTT GTTTCATAAACCTGCTTATTGCTCCCACCCCTGCCAAAAAAATAAAATATTGGAGGATCAAGGTGAGTTG ATGGCTCTTCAAGTTCATCATCTCCATTAAAGAATACCTACCGGTATACATGATAGTTATTTCATTTCAA GCTTGCTTACTTTCAAACATTGAAGGTGTGCACCTGTGTTCTTTAAATACATCTCAAGGGGAAAAATACT GTGCAGCATGGCCCTGTACTTTCTTCTCATTTCTTTATATAATACATTTCATATCCAAGTTTTTCATGGT CTGGAAAATGGGTATTATGTTGGAAGTGTTTTTCTACAAAATTTTGAAGTGCTTTTATCTTTTATCATCT TTAATTGGAAGTGATTGCAAAGAAGTTATGTGTACTTTTCCCCATGCTTAATCCATAATTCTTTACATAA GGAAAAAGCCAATTTATGTTCATATTGCAGATTTATTTCGTTTTAAAGACTCCTAGCTGACATTCGCATC TATGATCTATCCGTTTTACTTTCATCAAATGGTAACATTTTCTGGAAGATTAGTGTACTTTTGGTAGATT TGAGGCAAACTGATGATTGACAATTTTTTTTACCTTTCACATATATAGAGGGAGTTATATACCATTGCTG TGGTATGCAATATTGGACAATCTGTTTATTATCCAAAGTTAAAGTGAATCTTGGGTACTGGTAATGGATT GAACTATCAAGTGGAAGCCGATCTTCTAAGTTTTTCGTGCAGTAAATGCGTTGTTTAGACCAGCAAAATA TCAACAAACTATTAAAAAGTGTCTCGAATTTTATTCACAGCTAATCACAACTCGTATTTGGATGCAGGGC CGACCTCATGTTATGCGCGTGTATGGAGACTACTAATTCTATTCTGATCTTACATGCAGATTATATCTCA GATATAAGGCTATTCCATGCAATGTGTATCACATGACAAACAACTTGAATCAACATGTTTCATTCAGAAA CGAAAATATCATGATTTGACCATTCACACATGGTTCCATCGATATCACTACATGTATGATTAGTCAGGGG TCATGGCGTGAAATTTTCTTTTTCGAGATAAAATGTACGGATAAAAGACATGTGAAACGGGACGTGTGGC GCAGAATCGCTTTATTCTTATTTTCTACCAAATTCAATCGTCATATAAAAATGTATTTGTAGTCTTGATA TTCAGTGTAAATTAGATTCATAACTCAAGATTATCTTTAAAGACATCGATGCGTTGATTTCATCCCCGTC ACAATAATGGCACATTCCCAGCAGGATACTAAACAATGGCCAACTTTGGCGCATTCCATTTTATGAATAG GAGGCAATATATAAAGCTGATGAAAAAAATGAAACTATTTTCCTTCAACTAGTGTAAGGTAATTTCGCAC ACTGTAGAAGCAGGTGTTATATTTTTCTTGTGTACAGTTATCTACGTTAAGTAAAATCATTGAAAGTGTT TGTGGGTCTCTTACATGAATGTTTGGTATTTTAAATGTTTAGATAATTATGATTTATAGCATAAGGCTGG CTGGTACCATGCAATTCTCCTGTTTTCTATGAAAACAAAAATTCCTTTGCTATTCTTATGTTTATGTTAT CAATTATATGCTCTTTCAAACACCATATTAAGCCACCCCACAAAACAGATGCAGCAAAATAAAAGTCACA CGTCACACGTTGGAAACCAAGTCAATGCGCTTTTGCCCTTTGGTAAGGCATTAATCCTCATTACCAAGTC CCTTGGAGAGGACTTAAAGCCATCTGTCCCTTGGTTGCTTACCTACAAGCATATACATGGTTTCTTAGCA GGCAAGTTAACAATCATCAACCATCAAATGAAACAGGGATGGGAAGAAGGTACCTGTATGTAACATAGGG CCTCAAGTGTGCTCCCATATCTCTGTATTTTACTGGTCTGTTTGTTTTACATGACTGTTAAGAAAGCATG TTTGCAAGTAAGCTACAAGGAGACCAATAGCTTTTAAGTCCTGTCCTACGAACATGGTAAAGAGGATGGA TGCCTTACCAAAGTGCACGAGCGCATCGACCGGGACGTCCCTGTTCCGAAACTTCTGCTCTACCACTGAG CTACCGTGCCTGTTATAAGGTACAGGGATGTGAAGCGCTTTATTCTAGTGAAATTCATTTTGCCACTGCA GTTATTTTTTTTTTTTTGGGGGGGGGGGGGGGTTACCATTTCATATGTTAAAGAAGGCTTACCTGTATGT GTTGAGGAAGATGTGGTTTATCTTGTTCCTTTTTAAAGACTACACTTTGCCAAGAGAGAAAAAAGTTGAT TTAGTTCAGTTTGTGTCTTCCCCAGTATACATTGACATTAGTTACATTTACATTTTAGAAAACAATCATT AGAATCCGGGAGAAGATCAAGAGGTTTAGGATGTTGAATCTCATTTTGTTTGACCTTGTTCATTACCGGT AAATTTAAAGGCCAGGTTAAACCCTACACAAAAAACTTTTGCTATAACCTCTACCAATATTACTGCTGAG TACTCACTTGAAATCATATTTACCAAAATGCCCAACTCACACTCCCCCCCCCCCCACACTCACACTCACA CACGCCCCCCCCCCCCACACTCACACACACACACACACGCATCCCCCCACTCACACACACACATGCGCCC ACAAACTTTAGCCCACAGGGTCAGGAGGAGGAGCTTGATTGTTTTATATATTTACTCCTTAACTTGAGTT AACATTTTTCCTACAGCCATCATTCAGTCTTTAACATTCTGTATAAGTTAGAGTGAATCATGCGTCTAAA TTTTATTCTGAGGAAATAATGCATTTTCCATCATTACCAGATGTTATGTTACCCCGTCAATTGTGTCGCT TGCCTGTTTTGCATACCGTCTGTTTGGAGCCAGAAGGGCGTTAACTCTGTAAATTTATACGAGTCAAGGC CCTTGTATCTCCAAACAGACAAAATATTGCAAAGTTAACTCCAGAATATATCCTCTTGCCTTGCTGATAA AGTTGATTGTCTGTGGAAAGTTATCTAAATGCACATGCAGCACCCTATCTAGTTACAATCTATGTAAAAA AA
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???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
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BLAST time is limited to 30 seconds