Click here to close
Hello! We notice that you are using Internet Explorer, which is not supported by Echinobase and may cause the site to display incorrectly. We suggest using a current version of
Chrome
,
FireFox
, or
Safari
.
Echinobase
???banner.login???
???banner.register???
Contact Us
Cite Echinobase
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
BLAST
Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus
(Purple sea urchin) 5.0
L. variegatus
(Green sea urchin) 3.0
P. miniata
(Bat star) 3.0
A. planci
(Crown-of-thorns) 1.0
L. pictus
(Painted urchin) 3.0
A. rubens
(Sugar star) 1.3
A. japonica
(Feather star) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus
(Purple sea urchin) 5.0
L. variegatus
(Green sea urchin) 3.0
P. miniata
(Bat star) 3.0
A. planci
(Crown-of-thorns) 1.0
L. pictus
(Painted urchin) 3.0
A. rubens
(Sugar star) 1.3
A. japonica
(Feather star) 1.0
JBrowse2 Tracks
Genes
Gene Search
Gene Search Tips
Gene Nomenclature Guidelines
Gene Name Questions
Expression
Search Anatomy Items
Quantitative Expression Datasets and Plotting Tools
Anatomy & Development
Search Diseases
Echinobase Anatomical Ontology (ECAO)
L. variegatus
Atlas of Development (pdf)
Resources
Protocols, Reagents and Data on EchinoWiki
Resource for Developmental Regulatory Genomics
Davidson Lab Gene Regulatory Networks
Libraries, Vectors and Screening
BAC Table
???header.navigation.echinobaseSearchAntibodies???
???header.navigation.searchMorpholinos???
Guide RNAs (gRNA)
Cis-Regulatory Elements (CREs)
Literature
Papers
Books
Cite Echinobase
Community
Find People
Find a Lab
Organizations
Job Postings
Downloads
Data Download
Gene Page Reports
Browse Download Site
BLAST Databases
???blast.header???
Download BLAST databases
???blast.alignment???
???blast.program.blastn???
???blast.program.blastp???
???blast.program.blastx???
???blast.program.tblastx???
???blast.program.tblastn???
???blast.database???
-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 3.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_030997894.1 PREDICTED: Strongylocentrotus purpuratus FK506-binding protein 15 (LOC584718), transcript variant X5, mRNA AAAAAATGTGGTCCTTGTAGACGGGTGGTCACTAAAGCAGGTTCGACTGTACTACCAATTCATCACCTTG ATGAAGAGTGTCAAATATAGATTGACAAAGAATACCTGTGCAGCACCGGGCCTTGAACCCATGGCCTACG TATCTCCAATCAAGTGTTTAAACCACTCAACAGCAGTTTTTTTTAAACATCTTTTCTGTGTGAACATGGT GTAGTACGATAACCGTATAACTGAGCAGGGCTTATGACTCTCCGCCAACATGACTTGCCAGCTTCAACTT GATGTGGCCATGGAAAAAATACAACCCTTAACGTGTTATGGAAGAAACTCCCCCTTTTTTCTTTAGATTG TGTTCATACATATAGTTGTAACAAACAATGTGTATGCCTCTTTTGCTTGACAGTTTTACAGTTATTCACT TCATAAAGTTATATGTGTATCTCTCGTACAAAAGAGCGTTAGCCTCTCACTCTCTGCAGAGAGTTGCCCA ACGTCCACTTCATATGATACACTCTCCACACTTAGCCTTTAACATTTAGCCATGTATTAGTAACGCATCG CTCTTGGGTTAAGGGCTTACATGTATGGACCTACGAGCTGGAGCCATAGCGGTGAAGGGGAAGTGTTTGG GTACCCCTTCTTTGGTTAAGAGACGATCTGCCCTGCTGAGTAATAAGGCGTGTAGTCCGTGGTCTGACAG GAATTGGGAAGATTCTAATCTGGAGTTGTAAATCCTCAGAGTGAAGAAGAGATTGTCAGTTTAGATTCAA AGACAGTTTAGATTCCATCTTGGCTAGTCCTCCATGTATACCCGAAGAGCTAACCAAGGATACATGTCGC ACACACCGGTTTGAAACGATTATACAACAACCAGGAGGACTTGGGCCGGGTTAAAGGATTTGGATTTGTT GTGGTCATTCTTTCGCCTTGCATTGCTATAGTTACAAATCAAAATGGCTGCTATGTGTTGAAGCTTGTGA ACTATTCAGCAGAAGTCTAACTTTTTATGTAGTACAAGGATTATGATTGGGTCTAAGCTAAGCTCCCTTT TTGGGATGGATAAAACCAGCAATCAGGGTGGCAATGAGTCGCTGACATTCACAGCACCAAAACAGCCTAA GAAATCCAAAGATCAACAGCAACAACAGCAACCACAGCAAACACAAGGTCAAGGGGGCCAGTCAGCATTA CTTCTAGCAGTAGCAGTTCATGCATATAGATTTTCAAATGGCACATATATCAAACACGGGAAGCTTGGTG CTGCCATCCTGGGCAACCACACAGCTAATGATTATAAGATACTTCTATACATCAGCAAACAACAGCAGGT CACACACGCAAGGATATCTCCCACATTTGCCTTCACAGTACAAGCTAATAACTATGCAACATTTTATGAT GAACAGAGACAAAACTGGTCGATAATGTTTGAATCAGAACAGAATGCTATAGACTTTGCAAAACAGGTTG GTCTAGCCAAAGTGAACAGTGCAGGTAGTGCGTCCAAGTCCTTGGTCTTCCAAGATCTGACCATCGGTCT GGGGGACGCTGTCCAGAGTGGCGACTCGGTAGAAGTCAAATACACAGGCTGGCTGTATTCCAGCAGGTCA TTCGGAGATGTATTTGACAGTAATACCAGTGTAGACAAACCATTCCGCTTCAAGATCGGCAAAGGCAAAG TGATAAAGGGCTGGGAGGAAGGCGTGGTTGGTATGAAGAAGAATGGGCGTCGGTTACTCATCGTCCCACC CCCACTGGCGTATGGCAAGAAGGGGCTCGGCTCAAGGATACCACCCAATTCAACTCTTCTCTTTGATGTA GAAATTAAGAAGCTTAAATTTTCAAGAGATAAGGAAGAAAGTGGTTCACTATCTTCAGATGCCACAGATG GCTTGAGGTCGGAGGAGAGGGTCGGGTCACCAAAGGTTGGAAGGTCGAGAGGAGGAGATGTTTCAAGTGA CAATGAAAGCAGAATAAAGCACAACAACAACTCAGAATCACAACTGTCAACGAGTCCCTCATCAAGTAAA GCCAAATTGATCTCCCGTATGGCCAAGATGGGACAACCCATGCTGCCGCTCGCTGGCGGGGTCGTAGCCC ATGATAGCACAGACTCAGAAGCAGATGAGGCAAGCGCATCAGACACAGGGGGCATGTCACCCTCGGGTCA CCCAAACATGATGGCCAAGAAGGCCATGAAGGTGCCCAAGAAGATGCACAACAACCACACCAATAACTTC CAGTCTGATATGGGCCATGGTATGCACAACCAACTACCAAGGCCTGGCGACCCTGGAGAAATGGAGGAAT ATCCCAACTTTGAAGAATTCCCTGACCCTACTACCGGAAAAACAGTTCACCAGGTAGCCATTTATAACCC ACAGTCAGCCCAGCACAACCAATCTCAGCCTATGCCACCAGGCCAAGGCCACCTAGGACACCAAGCCCAG GCCGGCGGGATGGGCATGCAACATGGTCAGCAACCACTACCGAACTATCCCTTGCATCAGCAACAGCAGC AACAATCACAGCAGCAACACACGTATTACCAACCCCCACAACACATCCCCTCGCAGAACCAAGGACAGAA CCCCATGCAGCAGCACCAGATGGCGCCCTACCCCAACCTGGCCAACCAGCAAGCGCTCGTCACCCAGCAG CAGATGACAGACATGCAGATGGTACCCATCGTCCTGTCCGAGGCCCGGCAGCACCACTCCGACATCCGGT CGGCGGTCGGGAAGGTGTCGGATCGCATCGACGACCTCTGTAAAAAGGTCAACGACATCCAGCCGACCCC ATCCCAGCCGGCGTTGCCTAGCAACCAGGCAATGGAAGCGACAGTCCTGATGTCGAACATCTCACGCATC GTGCAGGAGAACGAGAGGCTCAAGGATGAGGTTTACGACAAGAATACGAGGATCGAGAAACAGAATAACA AGATTTCAGAGTTGCTACAGAAGAACCAGCTGCATAATTCCAAAGGAGTGAATCACGATGGCCTGCCTAA GAAGTACGTGGAGCAGAGCAACTCGCTGATGGAGAAGACCAACGACTCGTTCAAGCTGACGGCAACCCAG TCCCAGCAACGGGTCCTGGAACTGGAACAGGAGAAGGTTCAGATGACCTCTGAGTTGACCAATGCGACCT CAAAGATCAGTTCGCTACAGATGGAGCTGTCCAATGTCCAACAGAGAGAGGGCCAGCTCCGAGCACAACT GAACGGCGCCATCAACAACAAACATGAAAACCTGGGAGAGCTGGATCAACTCAGGCAACAACTCAAAGAC AACGACAACAAGTACACGGAGGTCCTGAAGGCGCTCAAGGATGAGAGGCAGCTCAAGAAGCAGCTGGAGA ACAAGGTCACAACCATGGAGGAGGAGCTCTCCGAGATGAAGATGGAGAGGGATTCCATCGAGAAGAATCT GTTAGAAAGGAAGAGAAAGGCAGCAGCAGAAAAACAGAAATCGGAAGAGGATATAGATGATATCAAAAGA TCATTTGAGGATGAGATCTTACAATTGAAGAGTAAAATCAGGCACCAGAAAACATCTACGGATGCTGCTA CAGCAGAACAGGTCTCTCAGGTGGAGAGGGAGCTAGAGACCCAATGGAGGGAGCGTTCTGATCGACTCCT TCTCCAAGCCAAAGAGAAGCACGAGAGAGAGATGGAAGATGCAAGAGATGAGAAGGAACAAATCAAGAGA AAACTGGCTGCCACTGAAACAAAGATGCTAAACGTCAGAGCTAATGACGATAACAAAGATGAGGTGGAAG GCCTCCAGAAGCAAGTCCAAGAAATGGAAGTCTGGAAAGAGAAATACGACAGCTTGCACTCGAGCGCAGT TAGCATGAAGGAGCGATACGAGACGAGGATTAAGGAGCTTATCCAGGAGAAAGCTGCAGCGGCCGCATCA TCTGCTACCATCGCACCAGCACCAACAAACATTGTTGATGAGGTCAAAAAGGTAATGAACAACGTCTACC ACTCTCTACGAGGCGAGATCGACACCAGCGAGAACTACAAGGGTAACGAGGTCCTCAACATCATTATGAA TACCATCAAGATGATGATGATAAAGGTCATGAAGGAAGCTGCGAAGAAAGGAGACCAAGAGGAAGGTGAT GATGAAGAGGAGAGTGAAGAAGAAGAGGAAGAGGAGGAGGAAGAAGAGGAGGATGATGAGGAGGAAGAAG AGGAAGAAGTACCTGTAAAGGCACCTGTGAAGGAGACTGTTGCTAAAAAGGAAACTGCTGTGCCTGCCAT GTCTGCCCCTCCCTCCGGAAGTCCAGCCCCTTCAGCAGTACAGAGCACAAGCCCTCCACCACCACCAACA ATAGTCATTGAGGAAGTTGTACAGAGGGAGGATGAACAAGTGGTGGAATCAGCCAGACAGCCTGAGGTAG AAGAGGTGAAAGAGGAAGAGGAAGAGGAGGAGCAGAAGAGGGAAGAGGAGAAGGATGAAATAGATTCCTC CGATGTTGCTCCGGCGGAAATATCCACAGAACCAACCAAAGTAGTAGTGGATCAAGGAGAACGGGTACAA GATGAAGAGAAGGAGGTAGAAGAACAAAGAGAAGAGGATGACACTGATGGAGGATTGAGGGATAGTACAA GGGTTGCGGATAACAACACTAATGATCAGCAGGAAGAGGAGGAGGAAGAAGAGCAAGAGGAAGAGAGAGA GGAGGAGCAGGGGGAGGATGATGCGGATGATGAGGAGAGCCTCAAAGATTCTAAGAAAGATGAAGATGAT GACTTCTGGTCTGCAGAGGGCTCAGATGCTGAGGAAGAAGTTGAGAAACCCAGCATTGTGGAGCCATCTG GTCCCCCTAAGATACCCCCTGAGCTACCCCCTGGGCTCCCACCAACCCAAGAGGAGGATGCTGGTTACCT AGATACAGGAGAAAAGCCACGGGCCCTCAGCAACATCCCTGATCTACCGGCAGATCTCGATGTGGGAGCG GAAGAGAAGCAAGAAGAAATAGAGGAAGAGGATGATGATGATGAGCCTGATCCATTTGCCCCACCTGAAC CTCCACCAGCAGAAGAAGAACCAGAAGATGATCAAGAGGAGGAGGAAGAAGAGGAGGAAGAGAAGAGTGC AGATACCGGTCCTCTACCCACCGTCCTAGACAGAGAGCCCCCTGAACTCCCCCCAGAACTACCCCAAGAA GATGAGGAGGACACCAGTAAGAAGACAAAGACCAAGAAAGAAGATATCAGTAGTGGGATCTTCGGTGATG ATGACGATGACGACGGTCTGTTCTCCATCCCTATCTCGTCCACCAAGAAAGCTGCCAAGAAGAAGCCCAC TCCAGCAAAGACCACAGTGAAACCAGCCGAAGACGATGATCCTTTCAAACCTGGACCACCCCCGCCCCTC TTTGGAGATGACGATGATGATGACCTGGATTGGATTAGCTGATCTCGCAGCTTAATCCTAATCCATTAAT CTCTTCAGTATTTTGCAATAGTAGTGAATGGGCAAGTATCCCTAATAGAGCTGTACTGTAATTCTATATC ATGGTTGTGATTGTTATGTGTTTTAAAGTTTATGCGTAAGGAGGATTAAAAGTTTCTATTTTGTGAAGTG CTAATGTCCTTAATCTTTTCATAACCATCATTGAGTGAAAAATAAAAAATAAAGTTTACAGTAAATTCTG GTTCATGTATGGTTTCTGACATAAGTAGTTGACAAAGGCACTCATAATATTTTGTTGTAACATTGCAGTA CTTGTGCTTAAAATTTGTGAAAGTTGGGATTTTTTAAAACATCAACTTCTAGTCATTTGAAAATCAGTAC TAAACATTTTTTGGTACTCTTTTTTTTATATGAAGTGGATATAGAGCCGGATGGATTGTGGAAAAATTAT TTGTGAATTTCTTCTAATTCTCTTTTGTCATTTGTTTTTTTCTGAAAAATGTTTTTTTTTTTACTGTGAG TCCACGATGTCTTAGTTGTGTCAATATTTTGTTGTTAGGCCAGATTTCCATTAAGAAGTTTTTCAAATTA AAAAGTCACCACCTTTTTCTTAATACTAATAGGAATATTACTCACAAATCTGTGGTTTAACAATTGCTTC TTTTTTTATTTGCATGTTTGATGTATGTAATGGTGTTTGTTCCAAGAATTATAACAAAGGAATTATAACA AAGGAACTATAACAAAGGAACTATAAAAAAGGAACTATAAAAAAGGAATTATAAAAAAATCATATATAAT GCCTGCTTTTTTGACATACATGTAAATATATATTGCCCAATCAAATTTAATGGACAACTTATACATTTAT AAAGTGAAATTAATTTTCATAATCGAAATGCTCATATTACTTGTGTCTCTTTTATGTTTGTTTGCATTAA GTTGTGCTATTACACTGAGACAAGTTCATTTTCATATTTTCTCCTTCTTGTGATATTCATGAAAGAAATA TCATGATACCAGCAGTATAATTTATATATTTGATAAATTTATTTTCACAACTAAATATTTGTCATTGATT GAATTCTGTTTCATACTTCTATCTCAATATATCCAATATTCTTTAACAACCGTTGTAACTTCATGTTAAA TGAATCCTTGCAGAAACCTACATGTACATGTACATGTAATCCAATACTGTTTCTTACAGAATTTATGAAT TTATGAGTTTGTGAATTTCAGTAGTATGAACATTTCATATCTAATGGTTATCTACAAGGAAGGACAAAAA TATATATCATATTTGAGAATTACTGTTTTCATTCCCTTATTGAGCTAAAAGTGATTAGAGATTGGAGCTT TTGTGATACATTTATAATCTAGAGCTTGAAGCTGAACATTCCTATTTAAAAAAAAAACATTATACTGAAA AATTGCATTATGAGAAAGAAGTACAATACATGTTAGTTTCAATTTATTTTTACAAAAAGTTGTAATATTT GAACATGAAACAACAATAGCATTAATATTTATATATGAACTTTGTGAAGCAATGACAAAAAAAAATGTTT TGAAAAGAGAGGGAGAGAGAGAGAGTGGGTGTTGGTGTACTTTTATTTGTTGCGTATTAATATCACCTTA ATGTAATTGTATGTTTAAATACTTCACAGCTTCTTTTTTAAACTAAAATGAATTAATTCCAACTGATGTT GTGAAGATCTTGTAGACATTTAATAGGGAATGAATTTGCTAGATATGTGTTTACCCTTTGATTACATCTC TTAACAAGTGTTTTATAGAAAAGAACAGAAAATTAATAAGAGCATTGAAATTTTAAGTTAGGATGTATGT GCCTTATATGAGAAATAAATTTGCATACGTCAAGTTTTGTGCAACTTCTGTCGCCTACTTAAATTGAGAT ATGAATAGAAGTTATGTCTTAAAATGATATATGTAACTGAAGTGGTATGAATGAATAACCTTCTTTAAAT GAAGAAATTTGCGGAAAATATACATGCTGTCATTATGTGTATTATATCATTTAAATATGTCAGAAATTTA CTTTAACAGAGATTTATTAAAGAAACTAAATGATCACAA
???blast.query.upload???
???blast.options???
???blast.eval???
???blast.eval.01???
???blast.eval.10???
???blast.eval.1???
???blast.eval.001???
???blast.eval.minus5???
???blast.eval.minus25???
???blast.eval.minus50???
???blast.eval.minus100???
???blast.numalign???
???blast.numalign.25???
???blast.numalign.1???
???blast.numalign.5???
???blast.numalign.50???
???blast.numalign.100???
???blast.wordsize???
???blast.wordsize.default???
???blast.wordsize.2???
???blast.wordsize.3???
???blast.wordsize.4???
???blast.wordsize.5???
???blast.wordsize.6???
???blast.wordsize.7???
???blast.wordsize.8???
???blast.wordsize.9???
???blast.wordsize.10???
???blast.wordsize.11???
???blast.wordsize.12???
???blast.wordsize.13???
???blast.wordsize.14???
???blast.wordsize.15???
???blast.wordsize.default.message???
???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
???blast.filtering???
???blast.on???
???blast.off???
BLAST time is limited to 30 seconds