Click here to close
Hello! We notice that you are using Internet Explorer, which is not supported by Echinobase and may cause the site to display incorrectly. We suggest using a current version of
Chrome
,
FireFox
, or
Safari
.
Echinobase
???banner.login???
???banner.register???
Contact Us
Cite Echinobase
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
BLAST
Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
JBrowse2 Tracks
Genes
Gene Search
Gene Search Tips
Gene Nomenclature Guidelines
Gene Name Questions
Expression
Search Anatomy Items
Quantitative Expression Datasets and Plotting Tools
Anatomy & Development
Search Diseases
Echinobase Anatomical Ontology (ECAO)
L. variegatus
Atlas of Development (pdf)
Resources
Protocols, Reagents and Data on EchinoWiki
Resource for Developmental Regulatory Genomics
Davidson Lab Gene Regulatory Networks
Libraries, Vectors and Screening
BAC Table
???header.navigation.searchAntibodies???
???header.navigation.searchMorpholinos???
Guide RNAs (gRNA)
Cis-Regulatory Elements (CREs)
Literature
Papers
Books
Cite Echinobase
Community
Find People
Find a Lab
Organizations
Job Postings
Downloads
Data Download
Gene Page Reports
Browse Download Site
BLAST Databases
???blast.header???
Download BLAST databases
???blast.alignment???
???blast.program.blastn???
???blast.program.blastp???
???blast.program.blastx???
???blast.program.tblastx???
???blast.program.tblastn???
???blast.database???
-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_030974650.1 PREDICTED: Strongylocentrotus purpuratus receptor tyrosine-protein kinase erbB-4 (LOC586488), transcript variant X3, mRNA TCACGAACTTAAGGGTGATCCGAGGTACGAAGCTTTACGATGACAAGTACGCCCTCTATGTTGCGTTGAC GTTTCACACGGGAGACCCAACGATAGCGACAGAAGAGATGTGGTTAACATCATTACACGAAATCTTGAAA GGGGATGTATACTTCCATCAGAACAACCAGCTCTGCTATGTGGAGACCATTGCTTGGGATGACATGCAAC CAGGCCTGGTGGCCAATATCTCCATGTGGGATGAACATGCACAACGAAACTGCTCCGAACATCGATGCCA TGAATCTTGCAATGGACACTGCTGGGGTCCAGGAGAGGAACATTGTCAGATATTAACACTAAAGGATTGC AGCTCAACCTGTGACTATCGTTGCCGAGGTCCCACGCAAGCTGATTGCTGCCACAGAAGTTGTGCTGGGG GTTGCACCAATTCATCCAATGCTGGCTGCCTGGCTTGTCGACAATTCTCGCTGGACAATACTTGTGTGGA AACCTGCCCTCGGCGGTATGAGTACGATAGAAACACTTTCACCAACGTGGAGAACCCCAACTTCCGCTAT TCCTATGGTTCCAGGTGTCTCAAGGACTGTCCAAACAATGTCTTGGTAGATGGTGATAATTGCGTGAAGG TTTGTGGGCCAGGAAAGAAAGAGCAGGACAACCAATGCATTCCTTGTGAAGGAGTGTGCCCAAGCACCTG TGATGGGATAGGTGATGATGGAGCCTTATCCTCCAAACACATTCGCAGTAAACAGTTTGATAACTGCACC CAGATCAACGGCAACCTCATCATAACCTCACACACCTTCACAGGTGATGCGTTTGCCGGCACCACCCCTA TCGATCCAAGTGCCTTGGAGATCTTCAGAACGGTCAAGCAGATCACTGGCTACCTGTCTGTCCAGGGACT TCACCAACACTTCACCAACCTCTCCATGTTTAGCAACCTGGAGAGGATCGATGGCCGCAACCTATACGGG GTCGGCGGCAGTAAGACGGACTCGGTCTACATCACGTCAACAAACTTGGATTTCTTTGGTTTGACAAGTC TCGCGGAGGTATCAAATGGTGACATCACTATCTCTAGCAATTCAAAGCTCTGCTACTTGCAGAAGCCAAT GTTTAGGCCAATCAGAAGCTCAAACCGTCAGACTATCTCCATTCAGGATAGTCGCAGTGATGCGGATTGT CTTGCTGAGAATAAAACCTGTGATCCACAATGCGCTGATATCGGCTGCTGGGGGCCTGGTCCTCGGCAGT GTGCTAAGTGTAAGAATGCAATCATCGGTGATACCTGCATTGAAGCATGTGATCTGGATAACGGCCAATA TGTGGAGACGGAGGCTAGTGCTTCAGAAGCAGCTGTGTGTGAACACTGTGATACTCAATGCTCAGCTGGG TGCTCAGGACCGGAACCAGACCAGTGTGACTGCCAATCAGACTCAACAGGAACAAACTGCAGGAGGATGT GTCGCAACGTCCAGGACGGTCCCTTCTGCAGGGCGGAGTGTCCCGAACCCAAGTTTGCCAACGCTCAAAA GAACTGTACCGATTGCCACTCAAACTGCCTCAAGGGATGTAATGGCCCTGAGAACAATCTTGGTGAAGAT GGTTGCTTGGAATGCCCGCAAGTTATGCTTGACTATAACAGAAAAGTGATGGAGTGTATGCTTATCAATA CTCCGTGTAGTGATGACTATTTCTATGATCGCATCTCCCACTCGGAGAAGTCTGATCCTCTAGCAGGTTC AGTGATCTGCCAGCAGTGTGACCCTATGTGTATCGGATGTGACGGGGCGGGGCCTCGACGATGCAAGCAG TGTAAACTTTTCCGGCAGGATGATGAATGCGTAGATGAGTGTCGGTCGGGCTTCTATCCTGATGTGGACG ATATGTGTCAACCATGCCACCCCCAGTGCAGGCAATGCTTCAATGGTACCGTACATGACTGTCTGGATTG CGAATCATACACCGTACAAACTGGAGAAAATACTTTCTTCTGTGCACTTTCCTGCCCAGCGGAATACCCC AACGAGCTCAGTCCTTACGTCTGCGGTAAGACCTGCCCCACCCTGTTTTTCCCTAACGCCATGTCAAAAT GCGAGGGGTGCCACACCGAGTGTAAAGACGGTTGCCATAACGGCACGCGAAGCGGGTGCTATGCCTGCAA GAACGTGGTGGTGAACCTGGAATGTCGGGCGGAGTGTCCAGCTGCTTATAAGAACACCAATGGTACCTGT CTCTACATTCATGGTCCTGATCAGAAGGCCACGCCCAAACCAGGAGCTGCCAAGTATGGAGGTATGTCTA TCGGACTTCTTGCCGGCATCGTGACGAGCTCCCTCATCATCTTCATCGTCATCATCGTGTTCGTCATCTG GTTCAAACAACGCATCAAGAACGACATGTACATCGACATCCCCCCTAACATAGATCTGCATGATATGAAG AGCTGTGACTATACTGGAGCGCCTCTGACACCAAGCAACGTGGAGCCCAACCAGGCCCAGCTGAAGATTA TCAAAGACACCGAGCTCAAGTTAGGTCCGGTCCTAGGATCCGGAGCCTTTGGGACCGTGTACAAGGGTCT GTGGATCCCGGACGGTGAGAAGATCAGGATTCCCGTCGCTATCAAGGCTCTCAGGGAAGTCTCGCCCCAT GCAGCTGAGGAACTGCTAGAGGAAGCAAAAGTTATGGCATCTGTGGACCACCCATGCCTGCTACGTCTTC TGTGTGTCTGCATTGCCCAAAACATGACCCTGATCACCCAACTCATGCCACTTGGGGCCATCTTGGACTA CGTACGTCAGCACAAGGAGCAGATTGGCTCTCACCATTTGCTCAACTGGAGCTTTCAAATTGCAAAGGGA ATGGTATACCTGGAGGAAAAACATCTTATTCATCGTGACCTGGCTGCTAGGAACGTCCTCGTTCAGAGTC CAGCACAGGTCAAGATCACAGACTTTGGTCTGGCCAAGTTCTTGGAGGTAGACTCCAATGAGTACAAAGC ACAGGGTGGCAAGATGCCTATCAAATGGTTGGCCTTAGAGTGCATTCAATTCAGGAGATTTTCACATAAA AGTGATGTTTGGAGTTTTGGTGTGACCCTCTGGGAGCTGATGACCTTTGGAGGGAAGCCCTACGAGGGGG TGAAGGCCCGAGAGGTACCGGAGCTCTTAGAGAGGGGTGAGAGGTTACCCCAGCCTCCGATCTGTACAAT TGACATCTACATGCTGATGGTCAAATGTTGGTTGATTGATGAAGATAGCAGACCAACCTTCAAGCAGATG CAAGAAGAGCTTGAGAGAATGACCAAAGACCCTCAGAGATACCTTGTTATCCAGAATGATGGTGCAATGT CCCTGCCGAGCCCCACTCCCTCAGACTTCTACAAGACCCTCATGCAGGACACTGAGTCAGGAGCAGACCC AGACCTACTCATGGATGCTGAGGACTACTTACAACCAATGAGCCTTACTGCAAACAACATGACCTATGAG AGCCAGCAAGGTTTCTTCCCAGTGAATGGTGCTGGACCCAGGTCTCCTACAGGAAAGCCTTCTGGTCCAT TGAGAAAGGATAGCAGTCTCCTTCGCTACTGTCAAGACCCAACTTTCAAGGGCAACTTTGATAGGCAAAA CAGTAATACGAGCGGCAATGATCCAAACTTGAATGATGACTACTTGATACCAAATGACAAGCTAGAAGGC TTCTCACCATTAATGGAAGAAGAGCATGATTACCAGAATGACCCCAGAAGACCAACAGACCTGGGTGACA ACTACCTCCCTCTCAATGATGGAACCGGGTCTCAGCCGACCTCGCCCTCAGCTGGTATGCTTGATAATCT GGAGTACCATGCTATCATGGATCAAGCCTCACAGGGACCCAAGTCACCCAGGACCCCTACCATCCACACC GGTGACCCCTGGACTCCCATGCAACAACAGCATCCTCACCTGGTGGCACGGCAGCATAGCACGCCCTCCC AGCCCAGAACCCCGCCCGCTTACGCCCCTCTGGCACCCACCATGAGCTCCAGCACGCCCCTTCTGGGTGA CGTGTCCTTCGAGGGACCCGTGCCGCCTGGCGGCGCTCCCGTCATGAACGGACAAAACGGGGGCCCCAAA GGCATGTACCGCTCACCCCCTCCCTCTAATAGTTCTGGAAGCCTTGGTCGGCATTCAACGAGGGGCAGTG AGAGCGATTATGTGAACTCTGATGTGGTGACAGATCGCGGGGAGTCCACCGTTTGATGATCGGACGATAG TGACAGACTTTCAAAAGGCCATTGCTTCCTTGAATATAACTATTTTTCATTATGGCCAAGTGTGCATTCT TTCAAGGGGAACGATGGATTCCTCCTCACGAGCGACAGAATGGATATACAAACCTAGAGAATAGACTCAC AATACTTTTACTTGTACTTAACAACAGATTTTTATGTGATGATTTTGAGATCATGATCAAATTATAGTGT TTTCATGAGAAACTTAAAATGTTTATTACTTAGAAAAGTGTATGTTTTGTGCCAATAGTGTGAGAAATGG TCTCAAGTTTGGTGCATCGGCATAGCTTACTTGTCTCAAACCAAAGTGTAGATATAATTCAATTTCAGTT TACCACAAAACTGAATATTCAACGTGTCTTTAATTAGGAGAATTGGGTAAGTATTGACTGGATATTGCAA AATGATTAGGTATTTGACAGGAAAATTGGCAAGTTAAGTCCAGTTGTATTACTAGGTGCGAATGTTCTTT ATCCTGTTTTAAAGCATTATTTTAGAAATGCGTGTACATTGAACCATTTTTTGCTCAGCTAACCATTCTT GAATAATTTACTTATTAATTGAGTGAGAAATGAGAAGAAAAAAAAATATCGGTAGTTGAGTAAACTCAGC TTTTATCTCCTCTGTTTTGAGAATCTTGTTCAGTACTCGTTGAAAGACAATGTTTGTATGTGTCCTTGAC GTAATATATTATATGTAGACATTGATTCTTTCAACCTTCGTGTAGCCATAAGGTATTAAGAAACATTTAT CAAGTACTTAAACATGTATTTATATCATAGTAAAGCTCATTCTGGGATGTGATGATGGTACTGAATCTCA AGAAAAAAATGTATTTCAAATTTGTTTATTATCCAGTAGCTCGAATCTGTAAAATGTTCACAAACTATCA AAATTTGAGCTTCAAATCAAACTTTTTATAGTCTTAATATCAATAAAAGTTTGTTTCAGAATTGTGTCAT GATGATTTCCAGTCCAGAAGTTCAGCTTATCAATGAGAATGCGTGTAGTCCAACGTTGTTACGGTCAACA AAATTCTTTTACGGCACTATAGTCTTGTGCCACCTAGAAAGAGAAAGTTTTCACATATTTTAATGTTGTA CAAGAATGCCTTTAAACAATCGCTTTTACATATATTTCATGCTTAAAAAGATTACACAAGACTTTAAGAT ATACACAATAATAGTTGTAGTAAAGCAACATACAACTACATACCTGTAACTGTTTTCTTTTGATATTGAT CTTGCTATATTTGAAATCTTTGAAAATTATATATATACTTCAGGTTATTTAAAGTATTGATAAATATCTA TAAGGTGGAAAATAAAAAGAAAGGAAACATACATATGTTTGTATGACAGAATAATTGTCTCGTAATTCAC TATATATTTGATATGTGAATGATCCATGTACTAGGACTTCTTAATTGTTGAAAATATCCAAAAGTATTTA TCAAATCTATTTTTGATCTATTTATGAAATGAATAATCATATGTGAAGCTTTAAACATGTACTTAAAGGA GTTCAGGTGCTTTAGTCAGTTGTATGTATATCTCATGATTTTTTTTTTCTTTAACTATTGATACCATGTA AACTGTTCTCCTTTATGCTGCTATTTAACAATAATCTTTTCAATTCTCCAACTAAAGTACCATGATATTT AACTTCAAAATTCTTATAAAGTCTGAGATACAGTTAAGCTTGAGCAATGTGTTTGTGTTGAACTCATTAT TGTAGAATTATTGCATAATCTCTATGTATAAAAGACTTGTTTTTGTCTGGAAAAGTACTATGTGAAATAA TTTAGTGTGTCTTATCACTGCCAGTGCAAGAACAGTCTTGTTGTTGATGATAAAGAACTGTATGTTTGTG TATGTATTTTTAGACATATTTGCTCCCTTTTTAAACATTTTATGAAAAAGGCTTCAAAATTGCAGATGAC ATGTTCTTTCTTTAACGAAAGCAAGCGTGAAGAGAAAATGGGAAGAAAACATTGGATGGGAGTGTCTCAA GAAGACTTTTTAGCATTGAAAGTGTTTTTAAATTGTATATTAGGGTTTGGAATTGGATTTTGATTTTTTT TTTGTAGATGGAATTGTATTTTTGCAAGTTTGGTTTTGTGCCATGTGTTGCCCTTACCTGTACCTATGTA TCGAAGAGTACAATTTTATATTGTGTACACTGTACAGTGGGATATTATCACATTTTCTTGAGGTCATACT TGAATATTTAAAATATGGTATAATCCATTTCAAATGTTTTCGGGGGAAATATTTTACCCCATGGTTGATT TCCTAGGTTGTCTTTAAACACTCTGGATTAATTTTGCATCGTTGCCTCCTGTCAATATTTTGATTTGATA TTGAATTGGGAACTCATCTTGGTATGCCATCTGAAAAGGTTTTTTTAGGCTTGGTCCTAGAAATGATTTG AGGAAACCTTGTCATGCCGTTCATCTTATCTTTGTGTGTTATAGTCATTGGAATAATGTGGATATTTACA TCGCATGTTTTTGAAGATGTTTTTTAGAATAACTGTTGTCCCAAATTGCACCTTTGGAATCATTAAAAAT AATTTGAAGCTGGCTTTCAATGAAAAATACAAATTGGGTCAGAATGGGTACAGAATGGGTATTTTTTATA GTGCGTATAATTGAACCTAGATCTACTTTTTGAAATATTGTTTTGAGATATTATAAATTAAACGAGACAG TGGATGACAAGATCTTATCTTGGATCTATATATTTAGATCATTTTCTTGACTTACCTAATCCAGATTTTT TAGTCCTTTCTTGTTTTGTTGTTACTGTTCAAACCCCATCAGATTTTAGAGAATATTTCTTAAGTAAAGA CTTTTTCCTTGAAATGTTATACCGGTAGGAACTTTCTGTCTTGTCAGTTTGATTGCATTGACATGTAGTT TATCTGCTTGTCAGGTTTTATGGATACTTTAAAGGGCCAAATATATGCAACAAGTTGTCCATTTGTATTT TGCAACAGTTCAGTTCATGTAACATTGTTTTACTGCATATACAAGTCACATGCAAATGTTAAGAGTTTGT CATTTTCTTATGAAAGAGAAGTTCTTGAAATACGTTTTATTCTACCACTAGTCTAGGTATTACCCAACTT AACGAGCTATTTTTGTCATTGTGTTTTAGAAAGCATATGCAAGTTTGTTGATGCCATAATTTTTATGCAT ACAGTGGCAGGTGATACAATGTTCCAGTCTGCAATTAGGTATTACAGTCTCCTTTAAGATATTTTTCCTA CTGTCATTTTTATAGTCTTGTATTTTTGTAATTTAATTAAAATGTGAATCAAGTACATTTTTTATGGCGA CTAATCATAGACTGAGTTCAAGACCATAGTGATTGTCTCTGTCTCTGTTTTAAAAAAAAAGACCAATCAT CATTACTACCTATGTATTGGTGATTTTTTTTTAATTGTAAGTTGCAATTTTTTTTAAATGAATGTCTTAT ATCCTTAAACTTTGAATTAATTAGTTTTTAAAATTTGTTTGGATGCTTTTTTGGTAAGGCTGGTGCAATC TACTGTAAATTATTTTTATACATGCTTTTGGACAAATTCTTGTCGAGGTAGATCCATAGTTTTAGTTTCC TAGATGTTATGTATGCAGGTAAACTTTCAGGATGTTCTTTCATGTCAGTTTAGTACGGAAAGGTAGAGAA AAATATAAACCTGAGAGTTGGTTTTGCACGGGATTGGTCGCTTTATATATTTCATCAATCATTGATTTCT TTCATTTTACATCATGATCAAATAGATATTGAGGTGTTGGTGGTGGGATATCAGAACTAATGCTTTCTTA TGCAATATTTTATGTTATGTATCGTGTAGCATAGGCGCTAGTGTACAGTTATAGAATGCAAATCATATTA CAAAGGGCATCGGATAGAAACCCTTTGAATGATGATCATGATTATAATTATCTTTACGGTGTACATTTTT TTTCAATTTGAACATACTGGGTATAATCTTCAGTTGACTTATCACTTTATCTTTTTACAATATGATAGGC TTGTAGAGGATGCTCTTGTACATGGTTCACAGGTAATCTTGAGTTCTCACAAGGGACAGGATTTGGAGGT AAACCATTAATCATTTCAGAAAACTGCAAGGAACTAATTAGACTTGTTCTAAAAACAACACAACAGATGG TATATATGTATATCACAAGTTGTATATTAGTCCTGGCATACCAAGATGATCTCATTTTATTTACTTTTAC TTTAATACCGATTATACATTTTTATCAAGTTTGACTTGCAGACATCATTTGTCTTTTGATAGTGTTTAAC ATTCAGGGTTTCTTTAAAAATTGATTTTACGACGACTGAGATGGCTTGGTCATGTCAGCCGAATGGAAGA CGGCCGCATTCCAAAAGACATAATGTATGGAAAGTTAGCGACCGGGACCAGGGCTGTTGGAAGACCTGTC CTTCGGTTCAAGGATGTGTGCAAGAGGGATATGAAGGCCAGTGAAATTAACCCTACAAACTGGGAAGCAT ATGCCTCAGACCGTCCTGAATGGAGACGCGTTATAAAGACGGGTGTACAGAGGAGTGAGCAGAGGAGAGT AGAACAGTGGGAGGAGAAAAGACAACAACAACAACAACAACAAAGACAACAGCTAGCTACGGCTCCAACA GCACAGCCACAAATGACTTTTATCTGCAGCAACTGCAACAGGACCTGTCTCTCTAGGATTGGACTGTTCA GTCACAGCAGGAGCTGCACACCAAGAAACTGACAACTATATAGCACAATATTCTATTGTCTTTCGAGACA GACAGATGCCGAAGGAAGGATTTTTTTAATTTGCATTGCCAGAACTCAAGAATACCTGTAAGGCTCGAAT GATCAAACTTTTGATATTTTCTTATTTGCAGAAGGAACTTATAGCTGTCAAAATAGTGGTACTTTCCTAT TGCTTTTAGGTTATGAATGAAAGCTTCTAGTGTTGTAGTGAGAAGTTGAGTATACTGAAAAACAAGGTCC ATATTAAGGATGATCTTGTTTTTCATGAGAAGGAATAAATCAAAGCTGCTTTTATGAAACTTTAATCATA CATATAGATGAACAGGTATCATTGTTGAGGTGTTATATTTAAGAAGAAAAAAAATGTCTTATCTCGTTAT GCTATGATAATGTGTGTATATGTAATCATTACTGTGTAACGACATAGTACATTATAGGGACTAATAAAAA AATGAGGTCCTTTATTCATTTGCAGAAAACTAA
???blast.query.upload???
???blast.options???
???blast.eval???
???blast.eval.01???
???blast.eval.10???
???blast.eval.1???
???blast.eval.001???
???blast.eval.minus5???
???blast.eval.minus25???
???blast.eval.minus50???
???blast.eval.minus100???
???blast.numalign???
???blast.numalign.25???
???blast.numalign.1???
???blast.numalign.5???
???blast.numalign.50???
???blast.numalign.100???
???blast.wordsize???
???blast.wordsize.default???
???blast.wordsize.2???
???blast.wordsize.3???
???blast.wordsize.4???
???blast.wordsize.5???
???blast.wordsize.6???
???blast.wordsize.7???
???blast.wordsize.8???
???blast.wordsize.9???
???blast.wordsize.10???
???blast.wordsize.11???
???blast.wordsize.12???
???blast.wordsize.13???
???blast.wordsize.14???
???blast.wordsize.15???
???blast.wordsize.default.message???
???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
???blast.filtering???
???blast.on???
???blast.off???
BLAST time is limited to 30 seconds