Click here to close
Hello! We notice that you are using Internet Explorer, which is not supported by Echinobase and may cause the site to display incorrectly. We suggest using a current version of
Chrome
,
FireFox
, or
Safari
.
Echinobase
???banner.login???
???banner.register???
Contact Us
Cite Echinobase
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
BLAST
Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus
(Purple sea urchin) 5.0
L. variegatus
(Green sea urchin) 3.0
P. miniata
(Bat star) 3.0
A. planci
(Crown-of-thorns) 1.0
L. pictus
(Painted urchin) 3.0
A. rubens
(Sugar star) 1.3
A. japonica
(Feather star) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus
(Purple sea urchin) 5.0
L. variegatus
(Green sea urchin) 3.0
P. miniata
(Bat star) 3.0
A. planci
(Crown-of-thorns) 1.0
L. pictus
(Painted urchin) 3.0
A. rubens
(Sugar star) 1.3
A. japonica
(Feather star) 1.0
JBrowse2 Tracks
Genes
Gene Search
Gene Search Tips
Gene Nomenclature Guidelines
Gene Name Questions
Expression
Search Anatomy Items
Quantitative Expression Datasets and Plotting Tools
Anatomy & Development
Search Diseases
Echinobase Anatomical Ontology (ECAO)
L. variegatus
Atlas of Development (pdf)
Resources
Protocols, Reagents and Data on EchinoWiki
Resource for Developmental Regulatory Genomics
Davidson Lab Gene Regulatory Networks
Libraries, Vectors and Screening
BAC Table
???header.navigation.echinobaseSearchAntibodies???
???header.navigation.searchMorpholinos???
Guide RNAs (gRNA)
Cis-Regulatory Elements (CREs)
Literature
Papers
Books
Cite Echinobase
Community
Find People
Find a Lab
Organizations
Job Postings
Downloads
Data Download
Gene Page Reports
Browse Download Site
BLAST Databases
???blast.header???
Download BLAST databases
???blast.alignment???
???blast.program.blastn???
???blast.program.blastp???
???blast.program.blastx???
???blast.program.tblastx???
???blast.program.tblastn???
???blast.database???
-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 3.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_030988408.1 PREDICTED: Strongylocentrotus purpuratus F-actin-monooxygenase MICAL2 (LOC582210), transcript variant X1, mRNA AACCATTATCCAACATTTTGGGTGTAGTTTTTTCGGTGACAATTCTAAGGAGAACAAACCAAAGAAGACA ATCGAATTCTTCGATTTCACCGATCAACGTGTTCTTGAATCTCCATTGGAAATTACTAGACTTTCACAAG CAACTACCACTATGGAATATGGCATGCAGCTTCTACCAACTGGTGTTTTATGTTAGTGTGGAAACTCTGA ATTCTTTACAACATTGAATTGGAATCCCCAAAATATCCTCTCCCGCCATGCCTGGGATCGAGACACCAGG GGGTGTCCCAGCCAACAAGCGAGACGTCCTCTACGATCTCTTCGTCCAGGCCGGAACATTCCAGGGTATC TTCAAAACATTCTTTGAGCTCTGCGAGGAATTGAACCTCAAACCTTTTGCAGAGCATCGCAACTTCTACC CCAAGTTCAAGTCTCAGCTGACATCGTGGAAGGCTGCTTCGCTCTGGAGTAAACTAGATAAGAGATACAA TAGGAAGGAATACAAGAAAGGAAAAGCATGCAATAATACTAGAGTCTTCATTATCGGAGCAGGACCATGT GGTCTACGTACAGCTATAGAGTGCGCTATGCTCGGTACGAAGGTCGTGGTGGTAGAGAAACGATTCAGCT TCTCAAGGAATAACGTCCTCCATCTCTGGCCTTTCCTCATCACCGACCTAAGGAGCCTCGGAGCAAAGAA GTTCTTTGGGAAGTTCTGCGCTGGAGCTATTGATCACATCAGTATACGGCAGCTACAGGTGGTGCTTCTC AAAGTGGCCCTGATCATGGGTGTGGAGATCCACTATGGAGTGGGCTATGAAGGACTAGAAGTACCCCCAG AAGACCAGGAACATGAAAAGATTGGTTGGAGGGCCAAGCTAGACCCCAAAGATCACCCGGTATCAGAGTA TGAGTTTGATGTCATCGTAGGCGCTGATGGAAAGAGAAATACGCTGCATGGTTTCAAGAGGAAGGAGTTC CGAGGGAAGCTTGCCATCGCAATCACAGCAAACTTCATCAACAGAAAGTCCAACGAGGAGGCGAGCGTCG AGGAGATCAGCGGCGTCGCTTTCATCTTCAACCAAAAGTTCTTCATGGATCTACGAGAGTCGACGGGAAT CGACCTTGAGAACATCGTCTACTACAAGGACGAGACGCATTACTTTGTGATGACGGCTAAGAAGCAGAGT CTACTCGCCAAAGGTGTTATTCTGAAGGATCTACCAGACACAGCCAAGCTCTTGAGACAGGATAACTACA ACCACCAGAAGCTTCAGGAGTATGCTCGTGAGGCGGCAGACTTCTGCACCAACTTCCAGCTCCCGACCCT AGACTACGCCCTCAATCACCACGGCAAGCCAGACGTGGCAATGTTTGACTTCACGTCTATCTACGCAGCT GATAACGCTGCCAGGGTTCTGGACAGGAACGGACACAAGCTGCTGCTGGCGTTGGTGGGGGATAGTTTAT TGGAGCCTTTCTGGCCTACCGGATCAGGCTGTGCAAGGGGTTTCTTAAGTTCCCTGGATGCCGCCTGGAT GATCCGTAGCTGGTCTTCAGGAGACATGACACCCTTAGAGGTCCTGGCAGAAAGGGAGAGTTCCTACCGT CTCCTCGCTCAGACTACTCCAGAGAATCTATGCAAGATCTATGAATCATATGGAATCAATCCAAACAGTA GATATCCTCACCTAAACACCAAAGCTGTAACACCACATGAGATTAGGCACCAGTATGACACTTTAGATGA GGATCTTAAGGCTCAGTTCGAGATCCTGGAGAAGAAACCGTCCATAGTCCTCAGCAGAACAGCGTCCGTG GTGAGGAGTAGCAAGGTGCAGATGTGGTGTCAACGAGTGACCGATAACTACCTCAACGTGATGGTGGAGA ACATGACTAGTAGCTGGAGGAACGGTCTCGCTTTCTGTGCCATCATCCACAGATACAGACCAGATCTCAT TGATTACGATTCCTTGAGACCAGAGAACGTGGTCCAGAACAACCAGCTAGCCTTTGACATCGCCGAGCGT GAGTTTGGAATCACACCCGCAATGACAGGCAAGGAGATGGCTGCTATCGCGTGCCCAGATAAACTCACCA TCGTAGCGTATGTCGTCAGGTTCTATGATCTCTTCAAAGATGAGCTGCCAGCTTCAGTTAAACAAGAGAA TAACACCAAAGAAAACAATATCGCACAAGCCCTTCCCGCCCCCACCAAGTCTTCCAGTAAAACATCATTC CTATCCCGCATCGCCTCCAAGGTACGGAGGAAATCACACGAGAAGCATGATAAAGAGAACGGAGAGAAAG CCAAGGCCAGTGGTAGCGGCTTAGGCTCTAAACGAAAACATCACAAGCATAAAGATTCAGCAGCTGATGA CATTGCAGAGAAGCGCAAGCTCATGGCACAGGAAGCGCGGAAAGCCAATCAGTCTGAGAACAACAGTCTG AACGTAGCCGATAAGAACGAGCTCAATGTCGGGGTCAGAGGTCAGAATAAGGTCAGCGGACTGGCCGAAC AGCTCCAGGCCAATCTCCGGTCTAACTACGGCATGAATACAGTAACGGATGGACCAAGACCAAAAATGAG ACCACTGATTGAGACTGGCAATGTCCAAGCCAGTCAGCTGTGTGTGTTCTGTAGTAAGCGTGTGTATGTG ATGGAGAGACTTAGTGCTGAGGGCATGTTCTTCCATAGAGACTGCTTCAAATGCCAGGATTGTGATGTCA CAATCAGGATTGGAAACTATGCGTATCTACCAGACCCCGACGGTGAAAAAGGTCGTTTCCTATGTCGAGA ACACTTTGCAGCCCGGAAGCAAGCCGTCAGAAAGAGAAGTCTGAGTGATAAAGAGAAGGAAGCAGTCCAG TCAAAGAAGCCTGTGTTCTCTTTTGATTCTATCGAGGAGGTCGAAGACGAGAATGAGAACATCTCACGTC CAAACCCCACCACACCAAAGACACCTAAAACGCCCAAGGGACCATTCAGGAAACGCAATTTGCTTTCACC GTTCTTTGGCAAGAGATCCAAGACCACACCAGAGAGAGACGAAATGCAAAAGATGTATGAGCAGATGGCT GAGTCTAAAGGTGCCTTGACGGAAGAAGAACAAGCTAGATATAATCTGGGTACATCAGTGAACACAGATG ATGAGCTGGATGAGTCATCCGATAGCGAGTTAGACGAGGAAGAAAAGGCCTGGCTAGCTAGAGAAGGATT ATCGTCAAAGCGTGGCAGCAGCAAGCGAAAGAAGGGTTCCGGTAAAAAGAAGGAAGGCACCCCGTCCAAT CTCCAAGTGCCTTTGGCTTCTGATCACAACATACCTGAAAGTGATCTTTCTCCAACGAGCGACGTCCCAC CTTGTACCTTTGATGGTGGTATCCCACGCTCAGAGTCCAGCTCCAAGGAGAAAAAGTCACGTCTTAGTCG CATGCGCCCTCATCGCAGAGATGCAACAAAGGCCAACAAAACTGGAAGGAGGACGAGCGCTGGGATGCAA CAGGGAGAGGAGTCCATCAAAGACAAGAATTTTAGGCAGCGATCAGCAAGCACCAAAGTAGACAGTAGTA AACCACCAGATGGCGCCATACCAAAGCAACGAAAGAGTCGATCTCTCAAGCTAAAGAAGCGTTCGAGTGC AGGAAAACTGGGTTTGTCTTCGACGGAAGGTGACAGCGATAGAGAAGAAAGACCACTCTCCCCGAGCAGT CTGGACTTGCCTCTGGGCCAGTTTGGAGAAGAGGGGGCCAGGTCCAAGAGGAAGGTTCCAGATGTTGTTG CTGATCTAGGTCTAGGATCTCCAGAAGCAGCTGCTACAGAACAACTCCCAAGACTCATTAAGAAGCTTAG CGTAGATGCCAACCTCACCGGTGACTTTGACATCGATTCTACCACCGATGAGGAGGAAATGAAACGAGAC GAGGCAAGCTCAGACGCTGAACCCACTGAGCAGATCACTGACTCACCTCGATCCAAGGGGAAATCCCCAA GGAGAATGTGGGGCAAGCGATTCAAGAGATTAAGATCATTGAAAAAGCTGAGACAGGCTTTGAGTAAAAA GACTGCCAGACAAGAACAGGAGAAGAGAAAGATGGAGGAGGAGGAGCTTAGCGCCCGGCTGACGAAGCGA GTCCAGAAGGAAGCCCGTCGTCAGCACCACCAGCAGCAGCTAAAGCGCCATCGCTTGGCCCAGGAGATCC AACGTCAGCTGCAGGAAGTAGAGGTCAAACAGCGGGAGCTGGAGAACCGTGGGGTCGCTGCAGAAAGGGC ACTCCGCGGCGAAGAAACTCCCGAAGGTGTGGATGAAACCACCCTCATGCAAGAATGGTTCAGTCTGGTC AATGAGAAGAATGCCCTCGTCCGGTTTGAGACGGAGCTGATGGTTCAAGCGAGGGAGCTAGAGTTAGAGG ATCGTCATAGTCAGCTGGAGCAGGAGCTGAGGCTTATCATGGCAGTAGGAGAAGGGAAGAAGTCATCTAC CGACAGAGACCAGGAGAAGCTTCTCTTAGATGAGATGCTGGAGGTGGTAGAACAACGAGATGCCCTGGTG GCATTCTTAGAGGAAGAAAGAGTCAAGTATGATGAAACTGCGCTTGGCTTACAGGAGCAGCAAGAAGATC AGGACTTTGAGGCTATCATGCTTAAGAAAGGCTTGATGACCGCTGTCCGATAGCGCCCCGTCGGTCCTTC TGGGGACATCTGTCATTGAAGATGACCGTCCGTCTGATTGTCCAGCTGCTACAGCTAACCTTCTGGGGAC GTTAGTGTATTGAGGGTTCAATCATAACATACCTCTGACGACTTAACACCAGCTCAACAGACACACAAGG CATCCGATGATAGTATATTTTCACACACACTGTGTACGTGTGAGGACATCTGTGCAGTGAGGGGTCATCC ATAAGAAACATCTGAGGACTTAATACCAGTTAAACACATGCACAAGGCATAAATGGCAATGTATTTTCAT ACACACAATCAATGTCAATATGAGGACATCTGTGTATGCACACACTCATGGCCTTAAGACTGTATTTTCA TATCTGCATTTGCTGCTGATGTGAGGAATGCTGCCCAGGATTTGAAGCACTTGTCGATATTTAACGACGC TGAAGCTATGTTTATGTTATTGCATATCATATACATTCTGCCAACTTTGAAATATTTGAAAGCAATATAC CCAAAGCCTTCTTGTATTCCAGACTTCTCTACAGATACATGTATGTACAATTCTACACTTGTACATTATT TCACCTTCCTCTTAAAAAAACACCAAGTTATTCACTGCTTGAAAGAAGAAAAATAGCATTTTAAAAAAAT GATTTACCAAATTCATTCAATATTAGTTGCTAAAGTGTTTGGCCAAATTTGTATTGGGATGTAGAGTAAC TCTTGAATGGTCTGATTTGCTTATCATCCCAGTCTCAATTTTTATTCAGATCCTTGGTGTTTCTTAGATG AAGGGAATATTGCACTGGTTACACATATAACCAACTCATTTATCCAAGTAAGGACATTGCCAAAAGTAAT GTACGCATTCAGTTACCAATTTCCAAATAGATTATGTTTCTTTGATAAAGTGTAGTGTAACATTCAAAAG GATGCGAAATTATGATATTTATTCACTTATGTCATAGTACATGGACTATTAGTAGTTTAGGTTTTTCTTT TTAAAGAAACACAACTTCTATAACTTAAAGGTCACCATAGATTTAAGCCATTTTTGTGAAAAATCTGATT GTATTCATAAGAGGTGGGTGATTATCATCATTTCTTTCCAACTTAGCCTATTTTATTCTACTGATATTCA AGAGTAGTGGTGAATTAGTATTTAATTGATAAAGCCTTGCTATCACTATCAGCCTTGTGCAGGGTCTGCT GATATTATTTTGTCTGTTTTGAGCCAGAAGGGCGTTAACTCATATACTTCAATACAGAGTTATGCCCTTG TAGTTCTGAACAGAGTTCATCAATCATACCGTCTATTCAGAGCTATAAGGGAGTAACTTCTATACTTGAA AACATACATGTAGTTAATATGTCAGTCACACCGCTGTACCAACTCCAAACCGATCGATTCTTGGCCATTC ATTCGTAATATTCATGTTTGATGCGTTGTCAGTCTGACGTCGACGGTCTCGATGTGGCCGGGGTATTAAC ATTTTGCTCTTTGACAATATACTTTTAATAGTTTTATATCACTTTTCTGATGATGCATCAAATATTCTAT TGTGTCTGTATTGCCAAAAGTATCATATTTATGCTGTGTAGCAATTGCCTTCTGTAATTTTCTTTTAAAA TGTGTGTGAATAACTTTGCATAACTTAAGAATAAAAAGCTATTATGGTGTGGCACCTTTATCTCAAAATG AAGGCATAGTATATAACAATGGGAAGAAAATAAAAAGGTCTTTTGAAATCGGATTATTCTGTCAGAGCAG AACAAAGAGATATATGCATGTGTATGTTGAGTATACAAGCTCTAAATTACTGATGTCATAGACAATTTGA TTTTGTTTTCTTCCATCTTTTGTTTTGTGTTTGATATGTTTGAGAATTAGTGATTATGGGAGTTACATAT AAAGGGGTTCGCATTAGCACTATTAGATCCAGTACACAAAGCTAGAGAAGAATCGTGCATAATTTCTTCA CGATACAAAAATATTTACTATTGCATAGCTGGTTCTATAATTGATATACATAGTTTGACCCTGAAACCAT TTAGACAGCATTATTAATTTGTCTTGGGTTATAATCCATATTGCCTTCTCTCTTTTCTAGCATGTATTTG TAAATAATTTGGTTGTGTATTGCAAAGAAATATAAAGTTTTAAGGAATTGCAAGTTATGTGTCTATTCCA TAAATTGCAGTACTGATAATTTGTTGCATTTTTTGTGGGCTTATTTTGCTCGAATGTTTATAGCATCTAA TATTGACAGGTGTAAGATTATATATGGTTGCTTAGCCAACTTTGCGCGAGTGCTAATTTATTGCAAATGA GTGAGAAATATGCTGTTGCCTTTTATAATGATTGTGTGTACAATTATTGGTCTTTTTTTCTGCATCTGCC CCCCCCCCCCCCCCCATATTGTGTTTTCAACACCCCTAAGGCTCTTACTGGATGATTATTCTTCTCTTAC AGCTTTGAGATGTAGATCAGACTCTTAGATATCATTTCTTTATAGATGTTCACTTGAAATCCAATATACT GCCTTGTTGCACTCTAATGCATATGCACATGTCAGTTCAAAAGGAATAATGTAGAATTTAAACTTATTTT ACCTAACATGCTATTGCACAAGTTCAACCTATGATTGTTGAACATTTTGCCAGCGGTTAAAAAGGAATAT GTGACCTATGATCTTTTTTTAATGGAAATATATTTGAATAGCAAAA
???blast.query.upload???
???blast.options???
???blast.eval???
???blast.eval.01???
???blast.eval.10???
???blast.eval.1???
???blast.eval.001???
???blast.eval.minus5???
???blast.eval.minus25???
???blast.eval.minus50???
???blast.eval.minus100???
???blast.numalign???
???blast.numalign.25???
???blast.numalign.1???
???blast.numalign.5???
???blast.numalign.50???
???blast.numalign.100???
???blast.wordsize???
???blast.wordsize.default???
???blast.wordsize.2???
???blast.wordsize.3???
???blast.wordsize.4???
???blast.wordsize.5???
???blast.wordsize.6???
???blast.wordsize.7???
???blast.wordsize.8???
???blast.wordsize.9???
???blast.wordsize.10???
???blast.wordsize.11???
???blast.wordsize.12???
???blast.wordsize.13???
???blast.wordsize.14???
???blast.wordsize.15???
???blast.wordsize.default.message???
???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
???blast.filtering???
???blast.on???
???blast.off???
BLAST time is limited to 30 seconds