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Echinobase
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Echinobase Accession
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Echinoderm mRNA
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S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
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BLAST Databases
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Download BLAST databases
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_041602452.1 PREDICTED: Lytechinus variegatus sonic hedgehog (LOC445811), mRNA ATCACTCACAGCAAGGGCTATTTGACACTGGATATTAATGGAACACGTGGGTTTTTTTGCAAGGACTCGG GGACTAAACCCTAAAACAATCGTAAAAAGGGTAAATGACTTGCTTTGAAACATTCAGAATTGAAAATCCG TAGATGGAAAGTTGACATTTTGTCGTTCTCATTGCGGGTGGGGTCGTTGAGAGAATTGAGTGAACAGGTT GCCTATTTCATAGAGTGCTAGCAACCACCTTCGTCTGAGGAGTATACCCTTAACGGTGCTGATTAAACAA TTTGGATACGGCTGATTTTCAACCAATCAACGTGCGACCCTACATCGCTTGTGTGTTTTGTATGCTCTCT TCTTTCTCTCTCTCTCTTTCTCCCTCCGTCCTTCGACTTCGAATTGCTCAGGCATTTTTTAATGTATTTG TGACAGACTGAATAAAAAGGTAGATGGAATGGTTGAAGCGGTCACACATTTTGCGGATAAAGAGGTGGAA ACTTCGACCCAAGAGTCTTGCGTAGATGTCAAAATAGCGTTCATGACTTTGAATACCACTTGAATTCATT TTGAAATAGTTTTGCCAAAAACTTCAAAAAGTTCAGGAAAAAAATTAGTGGATGAATCATAATTATGATG AAGCTCTGAATTTAGGTAAACTTATCAGGGTCGCTCAAACTGTCGATTTTCGATGAGGCTCTTGGTAGGG AAAGGGAATGTAAATCCACGAGATATCGGAAGTTGAGCAAGTGGATCAATTTTGAAAGCTCAGGGATATT CTCTGACGAACATGGTTCATGCGGACATGGTAAAGTGGCTGACGGTACAAATTACCACAGCGTTGTGTCT CATCGCATTGACACAAGCCTGTCACCCGGGCCGGTCCGGTAAGACTTCACATCGGCCCCGGAACAGGACT CCTTTACAATATAAGCAAAAAGTTCCCAATATATCAGAAGACACATTTGGTGCCAGTGGGCCTCCTGAAG GTAGAATCGACAGGGACGATGAACGATTCAGCAAACTTTCTCCAAACAATAATGATGATATTGTTTTTAA GGATGAAGAAGGCACTGGTGCTGATCGACTCATGACACAGCGATGCAAAGACAAACTGAACACTTTAGCT ATCAGTGTAATGAATGAATGGCCTGGGATCAAACTACGTGTTGTTGAAGCATGGGATGAAGATCAACCTA ACGTAGAACCACTTCATGCTGAAGGAAGAGCTGTAGACATCACAACCAGTGACAGAGATAAGAATAAGTA TGGCGCTCTAGCTCGCTTGGCTGTAGAAGCTGGATTCGACTGGGTCAGTTATGAAAGTAAAGCATGGGTC CACTGTTCAGTCAAATCAGAATCTGCTGCAGCCAAGAATTCTGGAGGGTGTTTCCCGGGATTTTCTCAAG CATACCTTAAGAATGGACGCATGATAAGTATGTTGGACATCAGGGTAGGTGATGAGGTAGCCGTGGTCAA CAATAACGGAGAATTGGATTACAGTGATGTTATCATGATAGTACATAGAAAACTCAACGACAGTACATTA TTTTATGTAATAGAGACTGAAGACAAAACAATAGTACAGCTAACGCCACAGCATTTGATTTACATGTCAG AAAGGGAATCAAACTTCGACCAAAGCAGAGCTGTGTTTGCTAGTGAAGTTCGGACTAATCAATTTGTATA TACAACAGCACAGAACCATGACAGGGGGGTAAGGCCGATGAAAGTGGTCAGTGTAACTACGAGGTTAGGT CGTACGGCAGTGGCTCCAGTGACCAGGCAAGGATCTTTGGTCATAGACGGCGTAGCGGTATCATCGTATG CAGTCATGCGTGACGAATGGGTCGCACACGCATCATTCGCTCCTATCCGATGGTACACCTACATCAGTCA TATGCTTGGTATCACAGATACTGATACAGGACAAGAGCAAAGGGTGCATTGGTACACCCAAGGACTCTAC AAACTCGGTAAATACGTCATGAGTGATAGATTATTTCCAGGCTTTGATGTATAGGTTGACCCCCTTTCTC AACAGTTGGGACAATAAAAACCACTTCACATCACTTGACCAACTGGCTGGAACTTAGAGTGAGAGCGGGT GCAAACAAATGATTTGTTTTATTTTGTGACTCATTGTTGTATGTTTGCTGTTGACGGGAATTATGGGGTA AGAATAAGGTAGTCATAAATGTTGGCCTAAGCCACTGTTTAGATAGGCCAATATATCGGAAATAAGATAA TGTTATAGGAAGACTGAATATATACATCCAATATGCAAGTATATAATGTGGATCTCTATCCATTATAAGA GCATCGCAAAATGACCAATAGAAAAGCAATATCATATGCTTACGGTCATTAAAAAAAGGGACAGGTATAA CAAATTCATGTTTTTAGGTAAAAATCACATTGTTTTTACCACATCTCATCTTATCTATTTACCTTACCAC AAACAATTCAATGGCTATTTTCTTTGAGTGTTTCGTCCAAATAACACGTTAAGAATTTCATATCTTAACA AATATTTAAAGTGTATTTAGAATGCCAAAGTTGTTGTTGAAGAATAAAAGTTTTAAATATTTATCTTTGT ACATACATTGTTGTTGATGCTGCATTAAATGCAGTGACGTTTATTATAACTATCGTTGCAGTCATGAGGG TGATGAAACTTGCATATTCTTCCTCTACAGTAATTACATCATCTCTTATAGAGTATCAAACTATGAAAAA TGAACCAAGTCGTCATACTGTGAATATTGTTTGGTTTATTATGGCGGTCAAACGAACATGCGAGAACTCT CGATATTTTGTGTAATGTCATGTCATATTACTTGCTTTCAATATAGTCCATGTATTTATTCCGCTTTACC CCTGTACAAAATGTTCCCCGATGCTATTTCATCGTTTTCTAGGTAATTCTATGTATTTAATAATATTGTA TAGAATTTGATATCAACTTCAGATGTTATATTTCTGCGATTATGTAGGCCTATAGAGGAATTTTCTTTTC ATAATTATGATAGATATATGTAAAACTGCTAATTTATACATGTTATCGACGAAATGTAAGATGTTTTTAG CAATTTACAAAGAAAATTTGTCTCCTTTTTATATGTATAGATTTACTTGTTTAAGTCAAATTTTCATATG TTAAAAGAATCTTTCATGTTGTATATTCAGTTCCTTAACAATGCAAGTCTAGGCATTACCCTTCTCTGCT TTTAATGTAGATATTACTGGTTATGTTTATCAGTGTTCTGGACATATAGAAGAAGAATATAATCATAATA ATGAATGTCACAAAAAGCTAATCTAAGTATAGAAGCGCTCTATGACAAGGCATTCATCTCACTAAAATTA CTACAACGAAAATAAATTACGATTAATCAAAATATGAAGGAATAGATACAAAGAGTTAATTTTCATGAGG TATCAAATCTGTCCCAGATTAATATATTTTCGTATTAGGTTTTGTATTCTCCCTGCCTCTCAGATGAAAA AAAATTGCCTTCCTTATACAATAGCATTTCTTTTTATTAAAATTCAAGACTTTCATCGGGGGGAAATAGT CACCGTGCAAGTAAATCCAATAGTATTTTTGATTATTTTTCCTCATGTGGATCAATAGAAATTTAATTAC AAAGGATACCGAATGACACTCCCATTTCACGGGCAATTAATAATAATTACATTCTAGTAATATTTAACCT AGTGGTATATTGGTCAGTCAATCAAAATCTGCTTAAATACAGACGTAAACATGTAATATTAATTGAAAAT ATCGAAAAAGCATACCTATGACTATGACTTGGGTCATTTATTGTTCATTACCTGTGACCAGGTCAATTCA CTTTAATATAAAGGTAATAGACAACAAAAAATCCTTCATATACCTAGATATTCATCTCAATGATCCGGTT ATCAACCTTTCTGAAATATCATGATTATTATCCTGAGATTCCTATATCTAATAAAGGCAAACCAACCCGC GTACATAATCAAATTTAGGCTATACAGCTCAAAAAATCTACCTATATCATAACTTATCAGAATAACATCA TAGTATAAAAAAAAAATAATGATAATGCGGTTTTATTCATTCGCATGCATCAATGAAATATTATATACAT ATATATATATAAGAGAAATCATACATGCACAACAGCTATGGCAACTTTATTTTATACAATCAAGAAAGAA TGACAAACAGTCCTTTTCAGGACTACATACATGGTGTTTACAGTAAAAACGTACATTATCTATTTTATGT TGGGAAAGAAATAAATATAGAGAACGATAACAAATCAAAGTTCCCTATAGCAACACTTCCAAAATGTGAA CAAGAATTATCATTCTAAAATGCAAATAATTTGAGAACTATTCAATACGGTGTGTGTAGGGGGTGAATGT GTGTGGGTGATTGTGTTGATGATGAAGGTATGTGTTTGTGAAATCTTTGGACGTGTATATGATTAATCAG ATGTGCTTGAGTGTGGGAGTTTGAAAATTATGTAAAAAAATCATTGAAAATAGACTTATTAAATGATATT ATAAAAATGAAAATAAGCAGTAAAAAACACCAGGTTTTGCACCCTTTTATTGAAGACATAAACGTTATTA GCTTATCTGTAACTTTGCGAGATGTTTACGGTATGGTACCAGATCCAAATACACTCTGTAAGCCTACACA ATTCAATTCAATTCCATTTATTTTGTCAGTATAAATAGTACAAACGTGACATGAATCAAACATAGACATA AATAAAGTATCATACCGAAACGGTAGCAGCCGGAAAGAAATTATGTTTAACGGTCAAAATATTGTAATAT ATAGACAACATACTGTACACGGTAAAATTTATGGTGGAAACTGAAATTGCGCGGCGAGTAGCCAGGGATT TATCGCTAAAAAAACCCCGGTTAATTCCTGTCAGTTTTAGGTTACGGAATACTTTAACATGTTGAGGCTT TTACAGTATATTCACCATTGAATTGGGTCTTTCGTAAATTTTAAATTATTTTCACCGTTAAATTGGACAG GAAATAAACACGGTTTCCCCGTAAGAATGTGGTCTTTTTACACTGTATGTTGATATGGCCCTTCTTCATT TGAACAGGAATGATAATGATAAAGGCTTTGAAAATATTGAAGGGAATTTATATCGTTTAGTTGCTTTGGT TGTTTAAGACATTACATCATGTAAACAGCCAAAGTAAGAATCAAGACAGTAAGTCAAACTGATGATAAGA TAAACGTTCATATACATGAATATATATAGACCATAAAATTTGTAAAACTGGATTAAAACTTGATTAAAGA ATATTTTCGTTATGTCATAATAATCATATATGCTTGTGCTGCAATACGCGGTCGTCACATTAATAATAAT AGGAAGATGTCGTTTTATTCATAGTACTGATAATATATTTTCGCGTTCATACTTTGTCAAGGTGTGAATA TAGTTAAAGCAAAATAATACAAGTAAATTTCAAAAAAGGTTAGACAAGAGACAGTGATGAAATTATCACT TTAACGTTATAACCAGACTTGCAGAATACACAGTTAAAAGTACCGTATATTTCACCGAAAAATTATTCAG TGAATCTAGATCCCCCCTTTAATGGTGAAATAACATGGAATTTACGAAAGACACAATTTAACGGTCAAAT ACTGTAGTAGCCCATGCACGTATTACTGTAAACAGTAAAATTTGCAGTGGAAACTCGCGCAGCAAGTAGC TAGGGATTTATCGTTAAAAATTACGGTAAATTCGAAATGAACAACTATTTTCGAAATTTTAATATTTGTG ACCAGGGAGGATCCAGGATTTTCCGATGGGGGGGGGGGCACATTTTGGC
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???blast.matrix???
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???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
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BLAST time is limited to 30 seconds