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Echinobase
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Echinobase Accession
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Echinobase Accession
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Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus
(Purple sea urchin) 5.0
L. variegatus
(Green sea urchin) 3.0
P. miniata
(Bat star) 3.0
A. planci
(Crown-of-thorns) 1.0
L. pictus
(Painted urchin) 3.0
A. rubens
(Sugar star) 1.3
A. japonica
(Feather star) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus
(Purple sea urchin) 5.0
L. variegatus
(Green sea urchin) 3.0
P. miniata
(Bat star) 3.0
A. planci
(Crown-of-thorns) 1.0
L. pictus
(Painted urchin) 3.0
A. rubens
(Sugar star) 1.3
A. japonica
(Feather star) 1.0
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L. variegatus
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BAC Table
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BLAST Databases
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Download BLAST databases
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 3.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>JT119475.1 TSA: Strongylocentrotus purpuratus WHL22.207203.1 mRNA sequence GTGCATTGCAAAATTGACTTGTATTTACAGAAATTTTAGCCATTGGAAATATTTATTAATCAAATTAGGG AAAAGTGTTGAATGAATTTGCCACACATCAAAAATGATTTCAATTGCATAAAATAAAATATGCAAAAAAC ATTGGAAAGAGATAAACTTCTTTGTTTAATATTGTCATTATCCTCATTTGTGTGTTGTACTCTCTTTCAT ACTTTTCCTTTTCTGAATACCTTTTTTCAGGTTTTTATTAAGTTTTATTTTTTGCATTTTTTTCTGCAAT TTTTCATCCCATTTAATTCCAGATATTGAATCAGTCTGCAGACTACTCAAAGACGGTGAAAAGCAAAATT GGATCGCTTGACAATGCCACACATTCCCCAGGAGGAGGAAATGTAAAGATTGAAAAAAAGAAGGTGGACT TTGGCAAGAAGGTCACATCCAAGATTGGTTCTCTGGACAATGCCACGCACAAACCTGGAGGAGGGAAGGT GAAGATTGAAAAGAAGAAGTTGGATTTCAAGGACAAAGCAGCTTCAAAGATAGGATCCAAGGACAACATC AAACACCAGGCTGGAGGCGGCCAGGTCAAGATCGAGAACAAGAAACTCGACTTCAAAGTAAAGGCCACCT CAAAGATCGGCTCCAAAGACAACATTGAACACAAGCCAGGTGGAGGGCAAGTCAAGATACAAGAAGAAAA GCTAGAATTCAAGGCAAAGGCTTCGAGTAAGATTGGATCCCTTGATAATGCCAGTCATAAACCAGGAGGT GGAGATGTACAGATTTTAGATGAGAAACTGGAGTTCAGTACCAAAGCTCAGAGCAAGGTCGGGTCAATGG ACAATGCCGACCATCAACCTAGTGGGGGAGATGTGAAGATTTTTGATGAAAAGCCTACATTCCAGCACGC CTCACCACGTACAGACGAACACGACGATGACGGTATTCATTAAGGACAAGCGAAGCCATGACTTGATCTG CAATCCTATGGCTGTGACTCTCCCTGAATGGTGACCCTTTCTCCAAAGTAAAAGAAAAGATTCCCTCAAG GGTCAGTGGATACAGAACCCCTGCCACGATAGTCAGCTAAAACTGCACACCAGTCATCTGAATCATCCAG TTGTGGTATAAAAGATGGTGTCGTGGGAGATCTTATGGGGAACCATTCAAGATTTCACAGATATTATGTG TAATCGATCATCCGGATTGCAACCAAATTTATGTCCAACGGGTCTTACTACTCATTGACTTCTGAACCCT ATTGTTCCCATATGCTTCCCATATCCTTAATACAGGGGTCATTGGGTTCCAGTATAAGCAGTATTAATGG GTGTATCATTCAAAAACTTTTGCTAAAAGAGATATTTCTCAAAATAATTCCTTCTGCCTAACCAAATCAC TTGCCAAGAGCAATTCAAACTAGATTTGGGTCTCAGCAGTGCCATTAATTTTTTCTGGTCTTCATACATG GTTGGTACATGCATGTACCTGCACGGGGAGTCCAGTGTAGACAAACCAAAGAAGTTTGAACTCCTGCATC ACTGTCTGCAGATATCATACCAGTCATTTTTGGGCTAAGGTATACAAAGATGTGATCATAGATGTGATCA GTAACTATTCTTATCATCAGTGATGTTGCTACTGGTGTTAAACTAATAAAGGTTTTAAACTTGTCACCAG CCCTATATGAATATAAAAACTGCACAACTGATGCTACTGAAGTCCAATACCACAGGATACTTGTATGTTA TTTATTAAGAAAAACTTTAACCAGTTTTATCATGGTGTTAATTCAACTAGCCGTTGACAGACATTGTTGT CTTGACTTTAATAGCAAAGGGGTTAATCCTTGTAATTCTCTCATGGAGATTTCAGTCAGCATATAGAAAG GTGTAAACCATATGAGCTAAATCTCCAGCATTGTTCGTATGTGAAAATTCATGGAAGCAGCTTGCATGCA TTGCTCCAAAACTTGGTGTAAGTTAATCTTAAGTTCTGATTACATAAATGCATTCAAGAAAAGTGCTAAT TATAAATCATGCAGTAGATTGTTGGTTTGCACCGCCAAAATATAAACAAAGTACGACAAATTGCTGCAAA TAACTGAAAAAAGCATAACTCCCATATGCATATCACGTACTTGTTGTGATCACCTTTGTTTGCTCATTTA TTGGCTATTTTACATTTTCTACCAAATTCATAAGGCCGATGTCATTATGATTTGTGGTTTGAATACTTGA TCTTGTGTAAGTTTTTTGATTGTTTCTTGGACAATTTATTATGCAGAACTCAAGATTATCTTTATGTAAT CGACTTTTGTTGATAATCACATGTACTCCACTCTATGACTCTACATCTTGTTTCAACTCATGCATGTATA AAAAATAATCATGAGATTTTTAGAAAGTCCACAGGAAGTTTGCAGCCATTTGATAGAGCCAGTAAAGCGC TCTGAGCCATGAAACAACTATAGTACCAGCTGCTTTCACTAATGGTGCAGCCACACTTTCATGTAAAACC TAGCTTTAAGATGGAGCCACTTGTGTGATACCCAGTGGGATTACGGCATGTATATGATACTTGCGGGGTC TACAAGGTGCTTACTCCAAATGAAGGCCAAGATTGTCAACATGTTCAAAATTTATATCAAGTCAGCCCCG ACTATTGCTATGGAGCTATGGAGCATATATGGGTTTTGCGTTTGCTTCTGTGGCGTCGAGAGCTTACATT GCAGATACGGCCAATTTTACGAGAGTCAAAAGGGGCGAGTGCGTTGCTATGTTGTGACTTTCCTTCATGC AGCTATGAGGCTCCTGTGGGGGTAATAACAGTGCCATCAACAGTAAAAGCAAGACCTATGTGGGGCTTAC ACTGAGCTAGGTTTTACATGAAAGTGTTGACTGTGGCATAGGAATGACTCCCTCAAACTGTATCCAAGGG AGGTTCATGTACATAATCATATGTGTTTCATTTTTAATGTTTTGTGGATATATCATGTGAATGTGTATGT ATACTTCTGTGTAAATATGAGAAAATAAGTCGAAGATAAAGCATTGACGATGCTATGATTTTGTAACTTG TTTGTTCCAATTATTGATGTGTTTGTGGCAAAAATGCACTGCAAATATTAGCTTATATTGGTTTAGGTGC AAGAGGAAAACAAAAATCATGGGAAAATTGCAATAAGTTTTTACTATGAAATTAAGCGAAGCATCAACTT ATTCAGTGTTTATCGGATATTCCTCAATGTATGTGAACTAATCTATTCCCAAATTTTAGATGTTCTGAAT CTTCTGAATATATTAAAATGGAATGTAGAGAGGAAAAAACTATTTTAATCATGTTTGTAATTATGTAATC ATGGTTATGATTCTATTATTGAAATGCTTCTGGACCTAATCTGAATTATTTATAATCGTACGGTTTTATC TGTAAATTATTTACCAGTTTTATCTGTAAAATTCTTAGAGACATCATCGACGTATTAAGCTCCATATAAG CCCAGAATATCAACATGTATGGTAGTTCTGCTTTTCCTACATTTCATCTCAAGACAGCGCTAGAAACGAT ATATTACATGTTCAATTGAGATGTAGATTTTTATAGATTAAACACATATGAGGAACAGACAACATACTCA TGCAAAACTTGTGTTTCCTGCAACTAGACAACCGTTTCCTTCACTACAGTGATATGCAGTGTATCATGAT CAGTGACAAAAATATTGAATATGCCCTAATTACATTAATATTGATTATTATTCAAAGGTCAGTTCTTGTC AGTGTGTCATATACTGGTATGCTTTATTTTAAAGGAAACTTCATTTCTTATGAAAAAAGCCAGAATGTAA AGAATTTGCTTGTATTTGTAATACGTATTCAGTTAATTAAGCAGCTGCTGATGGCAAATTCTTGAAAATA TGGTTGAAATTTTTATCATTAATATTATATTTCTTATTCTTTGGTTATATTATTGTGCATGATGTGTATC TAAAAAGATTAAAAGAAACAAATTATCTGAAGAAATGGAAAAATTGAAGTTGAAATGTAAACCTGCATTT GACTTCAAACTAAAAGAAAGAACAGTGTCTTTCTAAATATTTTCAAAGTTCTACACATCAAAATGTGTGT ACATGTACAAGAAGTATGTAGTATGACAAGCAGTTTACTAGTATGATGATAAAGATAAAGAATTGTAGTA GAAAAAAAAGAGCAAATTCATGTAATTCTGATCAGACTCACATAGATAAACGAGAAGGTTATCAAAAATG TATTTTCAAATGTATTAGTGAATCACATCTTTATGTATTTATTTGTAATACAATTCTTTTTAAAAGCTTA AGGATGAACTATACTATAGCATGAAAAAATGAAACATACAGTTTGTTCGTTAGTTTTCTTGAAATAGATT ATTTATTATACTTTACTGCTTTATAAAAGAAAATATTTACATTGAGATTAACAACATGATTATACCGATT CATATTTACTTAACAGCATGAAAATGAAGTTTAATAATCTAAACTGCAGATAAATAATATGTATTTACTT CTTAAAATTCTAAGTACAAAGAAAGAGAACGAGTTCTTGTGCTGATCTCTGAACTTCTCTAGCTACAACA TTACATTCACACGTATTCCCTCTTGTAGTTAAGAAATATAAAGATCTTGAATATATCTTTAGTACAAGAG CATGTTCTAACTCTGAACCATGACCATTTGATGGTCATTCATACATTAGTAGTTAGTAGTATGTATTGCA CAAGTTCATTTATGCCACTGCAAGAGTTACTTTCTTAGCTACAGATGTGTCTGTAAACTGTATGTAGTCA GTCAAATATTACACTGAGTTGAAAATTGAAGAAAAAAAGTCTCTAGAAAACTCTCACATTGCTGAATGGT GAAACATTTTACACTGCCAAATATGTAACCCTGTATGAAAGTCTATCTTCTTGTAGTTATGAAGTAGAAT TTTGAGGAAGAAGTGCAGATGCGTCTCTCCGATTGACATAAATCATTTCATTCATTTCATTACTTTCAGT AATTTATTGTAGTATGGTCATATATAAGTTTGTATAAGGGCTGTCTACAGTCTGTATATCCTTTTAAAAT GTGAGCCACTCGCTATTCAAGTACAAATATCTCCTTTTCTATTATATATTTTAATATATAATGTGATTTT ATGTAGATGTGATTGAAACTTTGTAAGCCATGCAAGTGAAGATGAATGACAAAAAAAAAAAAAAAACAGT TTAATGTACTTTTAAACATTTACTCTATTTTACTACATTCCCTATCAAAATGTGCCATTTTCCTTGCTAA GTTATAAACAATGAAATGCCAGAAAATTTTGCCAATGGTTTTGGTGAAGAATTTTGTTGTTAGAACAACT TGAGTGGCGTTTATGATTTGTAGATAAATGTCATGATCACTTGAAAAGTCATACATCAACATCATGACGA GAGAATAGGAATAATACAATATATCACTTCTTTATAATTTCTATAGACTGCAAAACTAATCATTAGACAT TAATGCATGTATTAATTGTCATTTATATTGATATACCATTATAAAACCCTTTCACAGATATTGAAAGTGT ACTGCCTACACCTGATTTTGTCGGTAGCTAAACCTGTAGAAAAAAGTATTACAACAAGAAAGCAGCTGTA GTTGCCATACATGATAGCAATGAATGGCATGGCAATAGAACTACTATTAGCATTGTAGATCTGCACCACT GGTATAGTAAATTGGAACTATATGTGTGCCTAACATATGACCGGATAGACTATGATTAGCAGTTAATTAA GAGTGTAGAAACTGCCATGTAAACCCAACAGGATAACAAAGTCATTGAAATCAGTAAGTGTATCAACTTA CTATACATTTACATGTATCATGCTCATAATAAAAACTTAAGAAGTTCATTTGCAAGTTGATTATCAACTA CCACTGAGAAATAAGTTGGCTTCATCAAATCAGATTTCATCCATTCTTTCAGTTCAGATTAAAAGAAAAA AAACCTCTCAATTGTAAAACAGAAAGTACAGAAAGGGAAAGAAGATTATATAAAAGAAAGAAATAAAGGA GATTAAAGGCAAGTTCTTGAGGGAAGGTGAATAAATAATGTTAAAACTGGTGGGAAACAGTAGAAAATTT GAATTTTGATTGTTTTAAATGATAATGTACCATGTCATCTCTCAAAGTGTTCAAATATTCTGTGTCATGA TTACTCGATCAACATGCAATTTTTCACATAAAGGGGCACCATAATAATGCATATAAAGAAGATCTTGTCT CGTTTTTAATATTCCAATTTAGAACATGCTGAATTGAAAATGTGTTACTCAGTTCTCTAAACATCAATTT TTAAAAATAATTTCATCCTTCATATACAGAATACTCATTGTATGAGTTGCACAAAAGATATAAAACTAAC TCATGTTTAGTTATTCTGGTGATGTTCAGTTATTCTGTTGTCACAAACAAAATAAGTGTTCATGTATTGG AGATAAAGAGGTAGTGTTTTAACAAAGCATTTATTGAGAAGGAATCCTAATCAAGTAGCTATTTTTTAAT ATGGAAATTGCTCACTGTTTTCATTCGCAAAGTATAGATATGAAACAATGTCAATCAACTTTATTTGAAG ACATACTGAATATAGCTATTGAGATGTAAGTTATAGAGCACCTGTAATCTTCTGCAAAATGGCTTAATTT CAAGGTTGCTGCATGTATACTAGTCAACTGAAGTAGTATTTTTCTTGCATTCAAATACTTTGATAAACTT ATGCTCATTTGCTTGTGGCTCGTTGCTTATAATGATAAGAATCCTCAAAGATATCTGCAAATAAACTAAT AAATTTGTGAAATTAAATATACCGTTCAGGATGTGTGGACCTACTACATAATTCATGTTTCTTTTCGTTC CATAGGAATGTGAAGAAGAGAGAGAGAGAGAGAGAGAGAGAAAGAAGGAGGGAGATGGGTGCATATTCAA ACCAAGTGAAGAAAAGGGTTTGGACTTATATGATGGAATACTGAGATTGAAATGATGAATGCAAAAGTTT AAAAAACATACATAAGATAAACAAAGAACACTTAAAGCCCTTCTAAAGTGTTGGGAGCTCGAAATTTGCT AGAAATTTCATGGCAAAATTACCTTTAAATTGTTTCATAATGTGAAAGAGAATGTCAAAGATTCCCCCCC CCCCTCCCAATCTTTTTTTGAAGACTAATATTGATAAAAGAAAAGTAATTTGGGTTTTCTGTTGTACAGA AAACCTAAGTTTTGTACTCTTTCATCAATATTTGACTACAAACACATTTCTTTTGAAAATCCTTGCAGAA ATGTGTCTGAAATGACATCCTCTTCAACATATACAATTTAAGTGAAATTTTGCCATCAGATTTGTGGGAA ACGCTTTAGAGGGAGGGAGCAGTGAGGGAGATTTGATAATAGGACAATAGGTAAAGATAGAACAAGAAGT GTATGACTATAATAAGGCAAAGCAAAGATAGTCAAATGTGTATAGCACACATGGGGAGTGAGGACACAAG AAGTGTTTGACTATAATATCAAAGATAGTCAAATGTGTATAGCACACATGGGGAGTGAGGACACAAGAAG TGTATGAATATAATATCAAAGATAGTCAAATATGTATAGCACACATGGGGAGTGAGGACACAAGAAGTGT ATGAATATAATATCAAAGATAGTCAAATATGTATAGCACACATGGGGAGTGAGGACACAAGATGTGTATG AATATAATATCAAAGATAGTCAAATGTGTATGGCACACATGGGGAGTGAGGAAACAAGAAGTGTTTGACT ATAAGGCATATGAAAGATAGTCAAATGTGTATGGCACACATGGGGAGTGAGGAGATAAGAAGTGTATGAA TATAAAGCATATCAAAGATAGTCAAACACAGCACACATGGGGAGTGAGGACACAAGGCGTGTATGAATAT AAGGCATATCAAAGATAGTCAAATGTGTATAGCACACATGGGGAGTGAGGACACAAGATGTGTATGAATA TAAATCATATCAAAGTTAGTCAAATGTGTATGACACACATGGGGAGTGAGGAAACAAGAAGTGCTTGACT ATAAGGCATATCAAAGATAGTCAAATGTGTATAGCAGATATGGGGAGTGAGGACATAAGAAGTGTATGAA TATAAAGCATATCAAAAATAGTCAAACATAGCACACATTGGGAGTGAGGACACAAGAAGTGTTTGACTAT AAGGCATATCAAAGATAGTCAAATGTGTATAGCACACATGGGGAGTGAGGACAAGAGATGTGTATGAATA CAAAGAATATCAAAGATAGTCAAATGTGTATGGCACACATGGGGAGTGAAGACGCATTACCTCCACTGGT ACATCGGACTCCTTTTTCCGGTTAACCCATCTTACAAGAACAAGACATGCCCATCAGGCGACAGCCCTGG ATTTA
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???blast.eval.1???
???blast.eval.001???
???blast.eval.minus5???
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???blast.eval.minus50???
???blast.eval.minus100???
???blast.numalign???
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???blast.numalign.1???
???blast.numalign.5???
???blast.numalign.50???
???blast.numalign.100???
???blast.wordsize???
???blast.wordsize.default???
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???blast.matrix???
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???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
???blast.filtering???
???blast.on???
???blast.off???
BLAST time is limited to 30 seconds