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Echinobase
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Echinobase Accession
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Echinoderm mRNA
Echinoderm protein
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S. purpuratus
(Purple sea urchin) 5.0
L. variegatus
(Green sea urchin) 3.0
P. miniata
(Bat star) 3.0
A. planci
(Crown-of-thorns) 1.0
L. pictus
(Painted urchin) 3.0
A. rubens
(Sugar star) 1.3
A. japonica
(Feather star) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus
(Purple sea urchin) 5.0
L. variegatus
(Green sea urchin) 3.0
P. miniata
(Bat star) 3.0
A. planci
(Crown-of-thorns) 1.0
L. pictus
(Painted urchin) 3.0
A. rubens
(Sugar star) 1.3
A. japonica
(Feather star) 1.0
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L. variegatus
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BLAST Databases
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Download BLAST databases
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 3.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
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>XM_783972.5 PREDICTED: Strongylocentrotus purpuratus cold shock domain-containing protein E1 (LOC584092), transcript variant X1, mRNA TGATTCAGGCCGCGCGCGCGTACTTAGTAAGTTGCTTGTGAAACTATGGCGGAGGGCAGAAGTGCTGTTG TGCGGTGTTGAGTTCCCTATCTTCATTCAAGCTACCCCATGAGATGCAATACTTGCTGAAAAGTCTTCTA TCCGTCACCTCAACCCAGCTCAACACAGCACCTTGAATACTAAGATCTGCAAGTCGAGTCAACTAACGTT ACACTTGAACTTTAGAAAAACAGCACTTTGCCAACTGAAGACTTATTGAAATACCAACTTGACTTTCCGC TTTCTGTTAAAGAGACCTTTCAACTCCACTGTTCAATTTTAAAAGTTGTATCAATCTCAGATAGAATTTG TCAGAAACAAGGATTTTACAAAATGGCGAGTCCTCAGCAGTGGAAGATCCAGCGCTGTAACTCCCAAGAC CAATCAAACAATTCCAACTACAACAAGCAGAGCTTCTCCCCTAATGGTGGCAGCCTAACTTTTCACGATC CACAAGTTACCCAGGACCAGGCCCACAAATCAACAATGGCATTGCACCTGTGGCTGTCAGAGAAACTGGA ATCATTGAAAAAATGCTTTCTTCTTATGGCTTTCTTCAGTGTTGTGACCGAGATGGAAGACTATTCTTTC ATTACAGCCACTTTGAAGGGCCCATTGATACCCTACACATTGGAGACCCTGTAGAGTTTGAAATGATCAG TGACCGTCGTACAGGCAAACCCATCGCCAGCAGGATCATGAGGTTACCACCGGGTTTGGTCAGTACAGAG ATCCTAGCCCCTGAACAGCTGCAGGGGATCATCGTCACCGAGGCTAAACCACCTAGTACCAAAGGACATG CCGGACCAGCTGAATTTGGACAAGTGGCATATGAGATCAGTGGGGAGAGTTTCTTCTTGATGTACAGCTA TGAGGATGCACCTGAGGTACCTGCTATCAAGAAGGGTGACAAGGTTGCCTTCCAAGTTGCAACGGACAAG AGGAATGGTAACATGCAAGCCAGGAATCTAAGGCTCCTGGAGTCTGCTCAAGTGCCCCGCTACCAAGGCG TCGTCTGCTCCATGAAGGAATCTTTCGGCTTCATTGAGCGGGCTGATGCAGTCAAAGAGATCTTCTTCCA CTACAGTGAGTTTACTGGTGACGTCAGTGATCTTATTCTTGGTGATGATGTCGAGTTTGAAATTGGAAAT CGCAATGAGAAAGAGGTTGCCACCCAGATCAAGAAGCTGCTATCTGGGACTGTAGTCTTTGAAGATATCA GCCAGGAGGTCTACCAAGGAGTGATCAACAAAGTCATTCCCCGCTTCACCAACAAGAAGACTGCTGAGCC GTTCCCAGGCAGACTGATCTACAACACAAAGGATGGAGGGAAACGTGAGCTCTCCTTTGGAGACAAGGAC ACACTGCGTTCATACACATTCCTGGTAGCTGACATCGTTCATTTCTACGTTGCAACGGACAGGAGAGACC ACCTACAGAGGGCCACTAACATCAGTCTGGCTGCGGCAGAGACCTTCACCTGTGGCACAGAGAAACGAGA AACAGGTACTGTAGCTGCCGTCAAGGATGGGTTTGGATTCATCAAGTGTGCTTGCAGGGAAGCTAGGATG TTCTTTCACTTCAGTGAGATGCTCCAAGCTGGTGATATATGTGTGTCTGATGAAACAGAATTCTCAGTGA TACCTGATCCAACCTCTCCTCAACGCCAGATAGCCATTCGTATCAAACGCCTACCAAAGGGTAGCGTATC CTTTGAGACTGTTCTTCCTGATCGTGTCCAGGGTCTTGTCGACAAAGTGCCTGCTAACCTGTGGGGTCGT AGCCCCGGTAAGAACCGAGACAAGGAGCTTGATATAGGTTTCATCACCTACGGTCAGAATGGAAGTCGAG TTAACATTGCATTCCATGCCAAGGACACTGATGTCAAAGTACCACCGGCCATCGGTGACTTGGTTGAATT CAATGTGGCTGAGATCAAGAAAGATGGTTCCCGCATGGCAGTCAATATCAATGTCCTCAACAGGAGCTCT GACTCTCGTAAGATAGGAGTCATCTCGGTCATGAAGGAGAACTTTGGATTCATCGAGAGCGACAAGCGAG ACAAAGAAATCTTCTTCCATTTTAGTGAATTCCACGGAGACCTGAATGATCTAGATGTAGGTTATGAGGT CTCTTACATCGCGGTGCGCAAAGGACCAAAACTAAGTGCCGAAGAAGTCAAGAAAGTACAAGCCGGAGTC ATCCCACCAAAGGATGTTAAACCAGGCCAACACAATGGAACTGTCATCCGTCCACTACGTAACGTAGACC CTAACCAAGAGGAATACACTGGACTTGTAGCCGTAGTCAATGAAGATGGAACTACCGGTATCACCTACCC CTACTCAATCACCAGCCTGCTGAACAAGCATGAGTTCCTTCAGAAGGCTGACAACGTGTGCTTCCAACTC TGTACCTGGCCTGACTCTGACAAGCTCTGGGCCTGTAGCGTGGCTGCAGTACGCAGTCTGCTCAGGACCA GGGTGGACTCTATCAAAGGACAGTATGGTTTCCTTGATTACGACACTGGTGATGGCAAGAAGCTGTTCTT TCACATGAGTGAAGTGATCAACGGGGATGTCCACACTGGAGATGATGTAGAGTTTGTCCTGATCACTAAT CAGAGAACCAGCCGCCAGAGTGCCGTCAATGTTCGCAAAGTCACAAGCACCCCACGCCCTGAGCGTCTGC GCCGCCTGCAGAGTCTACCCAACGATGAGAAAGGTCTTCGTCTGATTGTCCTCCGCCAGCCCATCGGACC CAAGAGTGCTGAATATGGATTCAAAATTGAGCGTTAGGTTAGCCTGGGTGAATGAAGGATTCACGTGCCA AAGTAGGCCCTATATGTACCTGTAAATTGATACATCTCACTTGAATTTCATTCAATATTTCTATTTTTCA TGCTATTTCTTCTTCTTTTCTTATTCATGAAGTTATTTGTTTATTTTCACACTGTTTCTATTTCTCTTTT CATGATTTATCTTGACAAAGAAGGAATTGTAAAATTTGAATTGCATTTTTGTTTATTTTTATTACTTACT TTTTGAAAGGACAAGAGTTCTCTATTAAATGTTCATAAATGTTTATGGTACATTACAAATACCTCATTTA CAGGTAACTTGTTTCTTTCTTTTAGCCGCCAAATGAAAGGCTGCTTCATTACATTTTATGTTTTGTGTTT GAATTCTTCATTTACTGTAAAGAAACAATGAAACAAGTAAGAAAGTAAGTGAAATTAAGTTTTGCATTCT ATGCACTATTGGAGCAATCACATTTGCTCCAACATGAAATGAATATGTTTGGTATTATATGAACTTTAAC GTGCAGGTATTGTCAAAACGTCTTATGTTGCTGAGATGATGTGAGTTTTTTCTGTTCTAAAAGTGGTTCT TGTATCCAAAGGTCACACTAATGAGACCGTCAACAGACCGACAAAGAAATACATTAACTAAAATGTCAAA GACGAGGTCGGTTTGGATTCGGCTTAGAGTTGGTGTATGGGTGTGATTAAGGTATGACTGGAGTATTTGA AATATTGACTGATATGGGAAGTTAGTTGATATAATGTCAAAATTGCACAATTTACACTAACGGTAGTTTT TCTTATGCTGTGGTATGAACGGATCCTCGAACGAGTGACTATACTGGTCAGGTGTCTGAATATTTATATT GATGTCTGCAAGAAAGAATATGAATTGAATCAAGATATATTCCATCATTTGAAGATTTCAACTTGAGCCA TAGAACTTGAATTTGGACTGTACTAGTTTGAAATCAGAAGAGATATGTCAGTGTGGTACTTTGTTTTCAC ACTGCTGCATATTATTCATTGCCTTACGCTGCTATTATGCAAGATTAATGTGTTCGTATTACCTGGATAA ATGTGAAGAAACATGTTTCTGAAACTACCAGATATTAGTCAAACAGAAGTTTCCTGTAGGTCGTGAACAT ATTGACTGCTTTAAGGAGTCAAAGTTAATAGAAAGTTTGACTACAAAGCGTCGATATGAATAGAAAGATT GCCTTCATTAAGGAGTCAAATTGAATAGATTGATTGGCTACTTCAAGGAGTCAAACTGAATGAAAATATA TTGACTACTACAAGGAGTTAAGCTGAAAAGAAGAGACATTTGTGGAACAAAAACTGTGTTGTCTTGTCCA GTTTTGAACTTGATTTTCTGTAACCTGTTTGTAAACTAAATTTCTCAATCTGCTTACACGCATGAGCATA TTGGTAAGTGTAAATCTTTAGATGTGCTATTGCTAAGAATAGATATAAATTTGAAGAGTCAAACTGAAAA GATGAGAAGAAAAACACCTTTTTAAATAGTCACACTGACTAGAAGAGGTCACCATTTTATAGAGTCTAAC TAAATAGAGAAGATGACAATTTCATGTAGGTAGTCAAAGTGAATAGCATAGATGTCTATTTCATTGAGTT AAACTGACGTAGTATAGATGATTATTTCACAGTGTCAAATTTGATAGAATAGAAAGCGTGAATATTTCAG TGCCAAGTTCAAAACTTGATTTGTTATACTGGATGTACCATGGCTGATTTTATATGGGATGTGCAGCTTG TGTGTGGGTGCAGGAATTACTTGTGTGTTCTCAGACATAAACCTCAAGCCACTTATTGTAAGTTTGTAAA TATTCATACATATGTTTCTATTTCTATTATCCCTTTCTCTTTATGTCACTTCCTCTAATTCTTCTCATTC TTGCTCTTTCCTTCTCTGTCTATCTTCTTCTTTCCTCCCTAACTTTCAAATTTGCAAGTAAAAGAAAAAA AAGAGTAATTACAAGAATAACTTTGATTAATAGTATTCAGGTCTATTGTAAAAAGAATTTACATGTTCGG AATGTTAAGAATGTTTCTGAGTGGACTGACAATCCATGAAATCAATTTAATTATAACTCCTTATGGTGCT CTCATAAAATGGTCCAAGTTTACTTCTGAAAAAAGGACTAATTTGTCAGATAATCGCTTTATTTGTACAT TATTTTTAATTCAAAATACTCCAATAGATTTAGATAAATGTAAATTTGAAAATTAATGATCAGTGATGAT AAGTCATTCCTATTGATGCAAATGCCTCCAGCATTATATTGGTTGTGGGTTAACTCAACAATTGCCCCGA TAACAATTTCTGTGAGCTTTATTTCAAGGTTAGGGTTAGGGTTGAAGGTTTGACTTTGGTTAAGTGAAGG AAATCATCATGGAGCAATTGTCTCAGGAGCATGGTGTCTCGTACATCTGGGTTATCAACTTATCATATCT AAATGTTTTGCCATAGCTGATAGTCAGACTGGCATGAGAACTTAAAGAACTGGTGATTTACTTTGATCAA TCTTGTAGATTTGAGTCTCTGGTGGACAACATTTTGTATTGAGATGATTTGGGTGACAAACAACCAGTTA ATGTGCCTTTTTACTATCCTAAAAGTATGAAAAGTGTTGTTTATAATTCAAATTACCATTTATTGTTTAT GTGGATGTTAAATAGGGAGACTATGGGAACAACAAATCTTGCCAAACTAGGATTCTGTGCTGTCAATGAT TTAGTATTCACAAATAGATTAGATTTATGATGTCTTGACCCAGTGAGGGATCGAACCCATGACCTTAGCA TTTCCAGTCAGTGCTTAAACCAAAACAAGGTACAGATTTCTGATGAAATGTTTATGCTTGGGTCCTTTGG ATATACCTTTGATTCAGTTACATACTATCAGATCTTACACAATTGTATACAGACAGCCAACTTATTTTGA TTCAAGCTGAGAATAGTCACACATTCAGGTATGTGATTTTTCAGAATGGTTTTGACTGAAAATGTTCTGA CACCGGGTCAGTTTTGTAGTATGAAACCACAACCTGGTTCAATTTAATTTGTTTATTTTTTATTTTTTAC AAAATGTCATGATGTCACATGACAGAAATTGCATCTCACCTAAAAATTTGCATTGAATTTAAATCTAAAA TTCTATGTACATGTGTGATAGTGGGAGAAACATGAACGGTATCATACAAACATTGTTTTAAAAATTCTGT ATGTGGTGTATCTTTTGACAAAATTTAGCCATCCTGCATGAATTAGATTGATACAAGTTAAAACGGACAT GTGTTATATAATCCAAAGCTATTGTGCCAACCGGTAAAGTTTATTCCTTTGTTGGTTTTGTCCTTATACA TGGAATATACTCTGTGAAATATAACTTACCAAGCAATAATTTCATGAACACTCCCCTTTTCATCTAGAGC TTGATATTTCTAGATTTGTTGCTTATTACATTCATGGAGATGAACAGTATTTTGGTGCTATGATTTCTGC AATGCTTGTCAAAGAGAGATGTTTTTGTTTTGATAAACTTTTAGGGCACAATCATTATTGTTTTCTACAA TCTTTGTCCAAATGCATTCATTGTCATATATTTTCTGTATTGCAAAAGTATTTAAAAAGAGAATCAATTA TTCATTAGACTGTCTCTGAATGAACTTTCATATTGCTATGAAGAATGATAAATCAGTATTAGATGAATTA TCATTCAAACCGTTCCGATATTGGTAATATTATAATAGCAGATGTTTGTTGTAAAAGGCATAATTGCAGA GATATTTACAAAGATCATTTATTTCTTATCAAATGTTGCAATGCTGCAGTAATTTTCAATGCTGATCCAT ATTTCCTTCATGTATTTTCAGACTTAATTTATTCTGTAAGTAAATTTCTGATCAATTTTTAGGGGTCATT CATTACGTGGTGATAAACAGCTGTGAAGAATGTGACATGGTCATCAAAAATACATTTTGAAATTGGCTCT TTTGTAACCAATGTATATTTCACTGTAGTCGAGTACCCATTATCACCTAGTGAAAACTATGCCTTGAACT TTGTGACAAGATATTGTTTTGTAAGTCATGTGAGTTGGAACACAGTTGGTTTCACAGTATTGTTTAAAAC ATGTAATATACATTCTGGTGTTCCTTTTTTTTTCTTCAATGTCTAACTTTTATGTAAAGTGACATTTTAT TTCTTTACTCTACTTTTTCTTGACTTTTTTTTCTTCAAAATTGGCTTCATTCAGTTTTTTCTTGACAGGT GTTGACTTTCCAAATTTTTGTTTGTTGCTGACATTTTTGCATTAACTGTGCCTTAGAAATTTTGTTTTGT CAATGGACACTTTGAGTTGTAAAGTGTCATTTTGGTTTTTGATTTACATGACTGATGATCAGGGTTTTAG GTTAAAATGTACATGGATGTCGTTTTATATCACTTCTTCTTATTTTTTCTCTTTATAATTCTTTCAAATA GGAGGCTGTTTCTAATTTAATTTTTCTTTAAAAAATGCTCAGAAAGTAATTGATTTTTCAATGTTCACTG TAAGTCATGTTTCTGTGTCCAGCAGCACAAACAAACAAACAAAGAAGTGAGCTCATGTTCAATATGTTGG TGATAAAGCCTTGCTTTTGTATACTTGTAGTTAGTAGTTTTGTATGCCCATGACAGTGTAAAAATTCAAG TTTCTCATCAAGCTTGGGGATAATTCAAATGGATTTGCTTTTGTACAAATGTATGCTCTATGCAACTCTT CTTTCCTCTTCGTACTTAAATGAATATTTGAAAAACAAAAATGTCATGAACTTGCATTGAATTTGAATTT GTTGGCAGTAGATTTACTCCAACTCTGCAATATTATTATTGAGAGATAGAAAATTAGAAATGAATATTGG ATAAATGTTTTACAAGAATTTGATTATTCATTCAGCATTGTGTGTCAAAGTTGAAAAGAAAACGATGTAC GTTGGTATATAGATGATCCAATGTCCATGCGTGCGAACTGTATATGCTCTCCACATTATTGCCATTTCTT GTTTTCTAACAATCTTTGAAATATTTTGACCACAAATGTGATGTGTGTATGACAATTGCTATATCTCATT TAAGATGGTACTATAAACCTTTGTATTACTGAAACTTTATATAAGTTATAGAAACAACTATTCAGAAACG AAATGTGCATGGTTGTGCAATAAAGGTAACCAGTAACAAAACAAGTTAACAAACAACAAGTATTTTGTAA GATGCAATTATCAAGGTAACAAAGTGAACAAGACGAAAAAGAATAAAAAGATACATTCAAGAAAA
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???blast.matrix???
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???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
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BLAST time is limited to 30 seconds