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Echinobase
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Echinobase Accession
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Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
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BLAST Databases
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Download BLAST databases
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>JT100882.1 TSA: Strongylocentrotus purpuratus WHL22.279662.2 mRNA sequence GTCAGTGTATGCGTGTGGGTGTACACACAATGCAGTAGTGGGTGTAATAGTTTTCTTCAGGAGGGAGGGT TAAAATAACTCGCCTGTGCGGCTACCAATGAATAGGACATATGTGCATTTGGGAGTTGAGTGCATGTTCT GTACCAGGAGGTCATTAGCTAAGTAGATTGCCGAGGAGGGAGAGCGAGCGCAAGCAGCTTAGCGTAACAA AAGCAGTTTGTTCGTCTGCACTGTGGGTAAAAGAACACTTTGGCACTGGCGAGTAACAAGGCAGCAGTGG AGCCTGCTAGTAAAAAAAATTGTTAAAAGAAATAGAAAGCGTGAAGGCAGGCAGTCCCATTGTGTGAACT AGCTATTACCAGAGTTGCAATCTTTCTCCCTGCATGTCTCTGTGTTAATTGGACATTGTGGATGCTGTTA GTCATGGTTCCAGGCTGACGTTTTGACGGAGCTGAGCTTGAGAGTTTCCTCTCCACTCCCTACTGAACTA TTGCTTGATCTGATCACGTGAAGACTCTATATCACTATGAGTATATTGACTGTCAGTTGATGCCACTAGA TACGTCACTAGCTACAAGACCTGCATTGCTTAAACATTAGTTGCCAATTCACTATCTGCTGTATTGGAAC TTGGAAGACTCAATATATGAACATTGTTTGGTGGGGTCATAGCCTGTAGTACCTACACTGGATTGGAAGA TTTTGATATTGTTGCTTTGGAAGAGGAACAAGGTACTCTCATTGCTGTTTAGATGAATTCATTACCACAG GGCCCACTGCAAGGCAGCCCTCTCATCATAAACAGGACATAAACATTGACGACTTGTTCACAATTGCCAT CCAGTATCGGTGAAACTCATCTGGAACAGTCATTTTCTAGGATTCTAAGTTCATCATCGGAATACTGAGG GTCTGTCGCTACTACTTTGGATTTGCCTTTCCATTTTATCTGATCATATACTACCACTGCGGACCCAATG CTGGTGAGCGAGAAAGCGCACATGCAATCGTCATCTCTGCTCCTGCGTCCTGTCCCTTCGGTCAACCTCC TCACGACCCCAATGGGCATTTTGAATGATCACAGTGACGTCAAGATGCCTGAATCACCGGTAGACCAAGC CTTGACCAAGTCCATGTCCATGTCCCAACCCAGTTCTCTAGTAGGACCAAACCTCTCAGCCCATCCTAGA TCTCATTCAACAAGTTCATCAACAGGTTCAATAGTGAATGGCCTGCATTCACCCAGGAGTATGAACGGTA CCCCTTCCCCACCGACAGGCCTTGGGGGCGTGGCTGTCTCTGCTATCCAAGGTGTACCAGCCAATCAAGA GGTCCCTGCTGCTTGCGGAGCTCGTCAGCTCAGTAAGCTCAAGAGATTTCTCACCACACTCCAGCAGTTT GGATCCGACATATCGCCAGAGATTGGAGAAAGAGTCAGAGGTCTTGTAATGGGTCTAGTGAACAATGCTC TAACTGTAGAAGAATTCCACAACAAACTTCAGGAAGCCACCAACTTTCCTCTCAGGCCATTTGTTATCCC ATTCTTAAAAGCGAACCTACCTTTGTTACAGCGAGAGTTGATGCATTGTGCCCGGCTAGCCAAGCTTAGC CCTCAACAGTACTACCTTCAACATGAACACCAACTCCTGGAACCCAAGACTAACAGCGTTGACCCCACGG AGCATCTCATGGAGGTCAACGAGAACGGGAAGAGGAAGACACCAGAAGAGAGGATGATAGCAAGGCCGAA GGAGAATGGATCGAATGGAGGCGAGCGTCTGGGGGAAGGGCCGCACCCCAAGAGACACTGTAACGTGGGG GGATCACCAACTCACCCCACCTCAGCTTACCCCCCTCTCAATCACTTCCCTCACTCCCTGTCTGCAGCTC ATCATGCCTTTAGGGTGGAGGATCTAGGGACCGGTCAGGGGGCTGGCATCGCCAGGGACTCCAGGGATCT GAGAGAGATGAGAGAGATGAGAGAAATGAGGGAACGGCTGGAGAGGGAAAGGGAACGAGATAGACATACT CCTCATGGTAAGGAAGCCTTTCCACCATTCAGGGAAGTGTATCCTGATCCTATGTTGTTTGAAGACAGAG TAGAAGATGATTGGAAACATGTTGAGACGATGCTGCAGTGCATCATTGGTATGGTTGAGAAGACCAAACG AGCGTTAGCTGTTCTACACCAGCGCAGCATCCAGGATCGAGAGGAGCTAGCTCATTGGAATAGGAGACAA TCATCACAGTCTGGAGGTAATGAGTCAGGGGGTAAGAAGAGGACGGATGAGATGATGGCTCAGACTCTAA GACAGACGGAGGACAGAGTGACCGAGGTCAAGAGACGAGCAGAAGAAGCAGTGAACGAGGTCAAGAGACA AGCCGTCTCTGAGCTGCAGAAGGCTGTAACAGCCGCTGAGCGTAAAGCTAATGAGATGGTGAGTGCTGAA CGGACCAAGCTAGACCGTGCTATCGTAGAGGCTAGACAACAAGCATCAGATGAAGCTCTGGGACTTCTTA ATCATCAAGAAGACTCCAGTGAGAGTTGTTGGAACTGTGGGCGTAAGGCCAATGAGACCTGCAGTGGATG TAACACTGCCCGATACTGTGGTGCCTTCTGTCAACACAAAGACTGGGAGAACCATCATAGGATGTGCAGT CAATATGCCAACAACTCTGCTACCGGTGGTCAGCTGTTACCAGGGTTCCCTCTGAGCTCCACTGCTCCTC CATCCATGCCCCCCTCCACCATCTCCGTGGCTAGTCCTTCCCCAGCAGCCCTCAGGAGTCTTACCCCCGT GGTTGTCAGCACGGCAGCAGCAGCAGCAGCAACGGCTGCAGTTCCCCCGTCGTCAGCACCCACGCCCACA TCAGCTGCCAGTCCTACTGGATCGCATCACTCCAATGCATCAAATCGATCAGGGTCTCCGGCAACCGCAT CATCCGCTGCCGCCATCCCTCAGGAATCATAGCAGGATCGTGGGCAGTGATGAAAGAGTTCAATGTCGAG ACCGAGTCATGATCCTATTGACAATATTCAGGATATTGCCACTCTGTTGCTGATCTCCTAAGTCTAATAT ACCATGCAGATCCTTGCTCTAAGCAGTCCCAAGTGTGCATATAATAGACTATAAAATCCCTTGTGGGACA AATATTTGAGTTTTAAACACTCAACTACAGTGGTAACATAAATGGACTTGTTAAAAGCCACCTATATAAA GAGTTCCTTCTGTGGAGGATGTTTGGATTGTTTTTGTAGCATCAAGCCAAAACCAATTGATTGGGAAAAT CAGTAAACACATCTCAATGTTGTATAGCATGGAAGCATCACTAGCAAAGATTTTACTAACAACTTATGTC CTGTGGCAAGACATTAATCAACATTAGCCACTCTCCACCCAGGGGGGTACTGGTAGGAAGGAATTCGTAG AATACCATTAGCACAGTAATCAATAGCCTAGCTACAGCTGGATAATATTGGAGCGTCTTGTTCGCTATAA AAAATATGTTATTATTGAAAAAGTAATCTCTCAAAATATGATGCGACTTGGAATAGGAATTAAAGTTTAG CTGTTGATTGATTCAACTTATTCATTCCTCTAGCACGGTGCTGGGCAGCCATTTTGTTAATACAAATCAA GTCATCTTCGGTGTGCTTTTGAAACATACTGTGGTGTGAAAGTTATATTACTGCCTTAGTAGCTATCTCA AGTCTAAACCTCCCCACTCTATATTAAGAATCAAATTCATAGTGGAGTTTAAACCATAAAAGAATGGATA ATGCAAATATCCATTTGAATATAAACAAAATCATTTTTGTACTTCACGAATATGGTAGAGGAGGTTTGGT AATTTTGTGTTTAGAATATTTAATGCAACTCGTAAATAAAATGACGAAAGCTAGTTTCTTATCTCTCTGG CTATGCCTGCAATGAATAAAACATTCCATGTTAAGGTATAACTTGTCTTTACAGTGATGTTAGGCTATGC AATGTGGAGATTAACCTGGAATTACAATCAAACAAACTCTTGACAGATTTGAGGGTAAATTTTTTGTTCT CGTTGAACCAACTGCTGGTTGATATTGAACTGATCTAAAGATTTACTGTGAAGTCCACTTGTAGATTAAG GTCAAATGCTGCTAATTTAGATGTCTGCAGGATTCTATTATTTTGTGTTAACACCCTCATATGTAATATG TTGGAAATATTTTTCGTGAAGAATTTCATGTAGCGTTTCAAACTTTTGTTTTTATTAGCTGGACTATGAT ATAGTTATATTAGTATTTCTCTTGAAAGTAACTAAGGATCAAAACCCCGCACAAGGTTGTTTTATAGTTT CAAATTTGTACAGAGTGTGGGGTTTTGTATATTTCAGTGTTCATAACTGTTTGTTCTGAGGTTTTGTCAT TTTTGTTTTCTGAAACTATTCCCCACCTTGTTAATTTGAATGTGACTCAAGTCTTTAGAGATTGTAATGT CACTAAGCCTTCAGTCTCTTCTTTTCCTGCGCAATATTCTTTTTGTATTATTTTCATGCAGGAATTACAA AATTGGCTTTGTTTTTTATCACTTGGTTATAAGAATGATGATCATAATTTTCTTCTTTGTGTGTGAAATT GGAAATGTATAGATAGTCATAAACTGGCACAATTCAGTAGTGATTTTTCTAGGATTTATTGTGACAAATC AAAACAAAGAAAAATCAATTGGCATTTATTATGTACCTCTGCATTACATTTTGAAGACAAAATTCGTATT ATGAAAGGGAATTCCACCAGTACACATTTTCATTATTTGATTCAAGAGGAAACGGATTAATTTCACTAAA ACACCGACAAATATGGCCAAGTTATTTCTCTTTTGTTTGGTAACTTCTTTTATCACTTTTATATTTTAGA CACATTATTGAGAAGCTCGGTCAACTATCTTCATTTCATTTTTTAAAATTTTAATTCCTTTTACGTCCTT GTATTTTGTTTAGTTTTTAGTTCAATGTAGTTGAATGTTTGCAGTTTACACCCCCTTATACTGTGGCCAA GTCATGTGTGTGATTATTACTTTAAATATCATATAAATATGTTTTTCTTTTTACCATTGTGTAAAAATTT CTCATATTTTGTATGATCCTGCTAATTCAGCTAACCTTTAGGCTTGTATTCCACTCTATGAATAGTTTTT ATTTTCACAGAATGTAAAGATACTACTGTAAACAACCGTGACCAAATTCCACTCTCAGGCCTTTGTATTA AGTTAGTCTGATATAAGAACTGCCATTAACAGTATTTTTTTAATAGTTGTTCTGACTTTTTTTCATCATA AGCAGGCGCGTAGCCAGAGTTTGATGTTTGGGGGGGCACATACATGTAATCGATCGAGGTCAAAAAAAGG GGTCTACAAAATTTCAACCGATCCTGGAAATTTTAGGGGGGGCACGTGGCTACGCGCCTGATCATAAGAT CACAGATCCTAAATCCTTTTAGTCAATAATCTTACCCTAAATAGAGTTCCTTTTGTCATTTATTTTTAGA ACATTAAAAATAACAACAAAATAGTCTGGAGTGGACATTTTTTTTAAATAATGAAATTAATAATGGAAAA ACATAAATTCTGGTTTAGTACGTGGTTGCATATTCATGTGTAGGTGTAACATTATTCAATTTTAACTAAT TTACTGCAATATGAATTAGACATTTACTTGGACAATTTGTTATATGATCTCTTGGCATTGGTTTGAATTT GTGCCGATATAACACCATAGTATGTACGATGGTTTTTTTGTTGAACATTGTATAGCATAAAGGGTTATGC TTTTTGTTTGTGAGTTTGAATGTATCATGTGAGGGAGTTTTGTTATCCCTTGTAAATTTCTTGACCCTGT ATGGGAGGTCATTTCACTCTGGTAATAAATGTAAATTATTGTCAAACTTCACTAATTGTTTAACAATTCA TATTTCAATCATGAATGTGGTGAAATGGATTAATCTGCAATAAGAAGGGAGGGGTATAGGGATTACAACA GAGACAAATGATTGGGAGAGAGACAGCAAGAAAGATCTGAG
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???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
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BLAST time is limited to 30 seconds