Click here to close
Hello! We notice that you are using Internet Explorer, which is not supported by Echinobase and may cause the site to display incorrectly. We suggest using a current version of
Chrome
,
FireFox
, or
Safari
.
Echinobase
???banner.login???
???banner.register???
Contact Us
Cite Echinobase
Search
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
Search
BLAST
Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus
(Purple sea urchin) 5.0
L. variegatus
(Green sea urchin) 3.0
P. miniata
(Bat star) 3.0
A. planci
(Crown-of-thorns) 1.0
L. pictus
(Painted urchin) 3.0
A. rubens
(Sugar star) 1.3
A. japonica
(Feather star) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus
(Purple sea urchin) 5.0
L. variegatus
(Green sea urchin) 3.0
P. miniata
(Bat star) 3.0
A. planci
(Crown-of-thorns) 1.0
L. pictus
(Painted urchin) 3.0
A. rubens
(Sugar star) 1.3
A. japonica
(Feather star) 1.0
JBrowse2 Tracks
Echinobase UCSC Track Hubs
Genes
Gene Search
Gene Search Tips
Gene Nomenclature Guidelines
Gene Name Questions
Expression
Search Anatomy Items
Quantitative Expression Datasets and Plotting Tools
Anatomy & Development
Search Diseases
Echinoderm Anatomy and Development Ontology (ECAO)
L. variegatus
Atlas of Development (pdf)
Resources
Protocols, Reagents and Data on EchinoWiki
Resource for Developmental Regulatory Genomics
Davidson Lab Gene Regulatory Networks
Libraries, Vectors and Screening
BAC Table
???header.navigation.echinobaseSearchAntibodies???
???header.navigation.searchMorpholinos???
Guide RNAs (gRNA)
Cis-Regulatory Elements (CREs)
Literature
Papers
Books
Cite Echinobase
Community
Find People
Find a Lab
Organizations
Job Postings
Downloads
Data Download
Gene Page Reports
Browse Download Site
BLAST Databases
???blast.header???
Download BLAST databases
???blast.blastType???
???blast.program.blastn???
???blast.program.blastp???
???blast.program.blastx???
???blast.program.tblastx???
???blast.program.tblastn???
???blast.database???
-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 3.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_038195282.1 PREDICTED: Patiria miniata disks large homolog 2-like (LOC119724294), transcript variant X6, mRNA ATAGAGTAGGCTATTGTTGTGCACCAGGGCAAAGGTTTTACATGTAATGTGTGTGTGTGTATTGGAGGGA AAAAAGCTTATGATCAGCGTTCACTGCCCGTTGTTGTTGGACATGTTGAAAGTGGTTACAAATGCATTAA AAAGGAATTACTGATCTTGACAGAAGGCTTTTGCTCTGTTGGATGTCACACTCAACATAAAAAAACAGTC TGGTGTATAAAGTGTAGCAAAGCAGGTATGTTTGTCAATACCACTATCCGGATGAAGACCCACCAGCTTT AGATGGCGCCCCGCGGTTGGTTCCCGTAGTTGGTTCCAATGTGACTCAACCCAAGGAGAACATTCAGAGC TACGTCACGCAGACTACCGTGTCGCCAGTTGAGCCTAGTCCCTCCCCAGTGTTTGTCAATGCTGATCATC TGAAACAGTCTCCAAACGATATTTCACCAAGCGACAGCCTTCCAATGAACAATATAGAGGAGTGGGAGTA TGAAGACATTATATTAAATCGGGGTGGAGCTGGGCTGGGCTTCAGCATCGCAGGGGGTGTCGACAACCCA CACGTCCCCGATGATCCCAGCATCTTCATCACCAAGCTTATCCCAGGGGGTGCAGCGGCGGTTGGTGGAA GACTCAGATTGAATGATGTCATTATCAGAGTGAACGAAACAGAGATCCACAACGTTCCTCACCAAAATGC CGTTGATGCCCTCAAGAAGACCGGAAGCATTGTCAACCTGGTCGTTAGGCGGAGGCGGCAGCGACGTACC GGTGATGTCATCCGCATCAAACTGGTCAAGGGTACCAAAGGGCTGGGCTTCAGCATCGCTGGAGGGTGTG GCAACCAACATGTTGCCGGGGACAACGGTATCTTCGTCACCAAGATCATCGATGGGGGCGCGGCCCAGAT GGATGGCAACCTCCAGATTGGTGACAAAATCATCGCGGTTGGCAACGATAAACTTGAAGAGGTAACCCAC GAGAATGCGGTCGCTGTCTTGAAGGCGACCAGCGAAGTGGTCTTACTGACTGTCATCAAAGGTGCTGTCA TCAGCTACCCGTCTCCTCCGGCCAGTATAACCTCGCAACCAGACGTGTCCACCATGCAACCTTCTTCCCC GCCTCCACCGTATCCCGAAGCCATAGTGTCCAGCGTTGCCGGCGTGAGTTTACAATCGGAGCCCGCCCTC CAGCGACCTCCGACTCCGCCCCACCAGGAGATGTCAAACATGATGAATCCTCCGTTAACCTACCACCAGC CGCCCCAAGACACCGCGTATGGCTCCATGAAGAAGATGCACGTGCCGCCCTCGCCTACCGCTAACTATGA GGGCAACGGGGTAAAACCGTACGTCCAGAATGACGACGATTTCCCCAGGGAAGCAAGGACTGTGGTCCTG AATAAAGGAGCAACAGGTTTGGGTTTCAACATCGTCGGTGGTGAAGACGGAGAAGGCATCTTTATCTCCT TCATCTTGGCCGGAGGTGTGGCTGACCTCAGCGGGGAACTCAAAAGAGGAGACCAGATATTATCGGTCAA CAAGAAGGATTTACGGGGCGCGACCCATGAAGACGCTGCCTTGGCCCTCAAAGGCACGGGACAGACCGTT CTGATTGAAGCTCAGTACAAACCAGAGGAGTATAACCGCTTTGAAGCCAAGATCCAATCGCTGCGAGAAG AAATGATGAACAGCTCAGTGAGTAGTACGACGACGGGAAGCCTACGTACATCGGCAAAGAGATCGCTCTA TGTCAGAGCGCTCTTTGACTACGACAAGACAAAAGACAGCGGTCTGCCGAGCCAAGGGTTGAGTTTCAAC TACGGCGACATCCTGCACGTGACCAACGCCAGTGATGACGAGTGGTGGCAAGCCAAACAGGTGCTACCCA CGGGAGAGGAAGGCGAAATGGGTGTCATACCAAGCAAGAGGAGGGTGGAGAAGAGAGAACGAGCGAGGCT GAAAAGCGTCAAGTTTTCTGGAAGGGGAGGAAGTCTGGAAAGCAAGGGTTCCATGAACGAGAAACGTAAG AAGGGGTTCTTCTCCCGGAAGTTTAAAAAGGGACGGGAGAGCGACTTGGACACGAGCGACGCCGAACACA TCACCTCAAACGCCAGCGATAGCGAAAGTAGTTACAGAAATGACGAGATGATTCTCTCCTATGAGGGCGT GGTTCAGCAAGAAGTCAAATACACCCGGCCGGTTATCATTCTCGGTTCTGGCAAGGATCGCGTCAACGAC GACTTGATCTCAGAGATGCCTGAGAAATTTGGAAGCTGCGTACCCCACACGACGAGGCCGCGAAGGCCCC ACGAGGTGGACAAGCGAGACTACCATTTTGTCGAGTCTCGCGAGCAAATGGAGAAGGACATTCAGGATCA TTTATTCATAGAGGCTGGCCAGTATAACGAGAACCTGTACGGCACCAGCGTCGCCTCGGTCAGAGAGGTA GCTGACAAGGGTAAGCACTGTATCCTCGACGTGAGCGGCAATGCCATCAGGCGATTGCAGGTGGCCAACC TCCATCCCATCGCCATCTTCATTCGTCCCAAGTCGGTGGAGTCGGTCATGGAGATGAATCGGCGGATGTC TCGGGAACAGGCCGAGAAGACGTACGAGAGAGCCATCAAGTTGGAGATAGAGTTTGGCGAATTCTTTACA GCCATTATTTCAGGCGACACGTTGGACGAGATTTACTACAAATGCAAAGAGGTGATCCACGATCAGTCAG GCTCGACAATCTGGGTACCTGCCAAGGATAAATTGTGATCCCTGCACCACCCAGTAGCACCCACTTCAGT CCATGTCACAACCTGTAAGGTACCCAGTTGAGCCCGATGCAGCCTGTTTTGGAGGAACCCAGATTGGGCA GATCCTGCTTGATGTAAAATAGCATAATAATAAAAAAAGATTTGTATAAAGTGTGTAGAAGGCACAGGGC TGGTTTTTGAATTCCAAGCAGTCCCAGTTTTGATCCTTGTAGGCCTAGCCTTGTAGCACCCGTTACACTC ATAGAGAAAGCAGTGAGGACACCCATAGGCACCCATTCAAGTAAAGGTAACATGGGTGTAAGGTGGTGGT ACACAGGATTCGGTAATATGTGCAGTGTCACTCATGAATTTTTGTATGGACACTCAAAGCACAGGTGTGA TTTAGAGCCCAGTAGCGCCCGTTTCATTCTATACCTTATCCCCTGTGGAACCCACTTGTACCCAGTTGTA CCCAAGTTTTCTGGAGAAACCTTAACTCTAGGTTGGATTTTGAAATGAGGACAGATTCGCACTTGTTTGA GTAAATGTTGTTATACAGGCGATGTGAGTCAGTGTGTTTTAACGTGTTCCATCCCGTTGCTGAAGCTGTG GGATTAAACGGGTTTGGTGCACTGAAAGATTGTTGTTTGTTTGGGTACCAGTGGGCGTATTCTGGGCGTA GTGGGTTAGTAGATTATCCCCCACCCTTGCAAAGCCTACTCCAACCTTTCCACCCTTTTATCTCAAAGAC TATAAATTTCTCTGATGTGTACAAAGTGTAAATTTAGCACAGTAAAGAGGCCTATCGAAAAATAATAAAA CGCTGTCATTTTACGTCAATTTTTTTGGATGTAACGGAAAAATGCAGCGTGCAGTTTGGATTTCTTTATT TGTTACATTTAGCTTCTTCGTAGAATATAATTGGAGCTTTTTGTTTTTTTCAAGCTTGTAATATACAGCA GGAATCTTGGTCTATTCTCAGGACGATTTCTGTTTGGCCTTGTTCGGTTTTTTTTTGCCTCGGAAGTACA ACTGTGAGGGCAGTATTTGATGACGTTGCTGTTTTTGACGTGGAAACTGACAGAGAAATTTGGCACGACC ACCTGCAGTAGTTGCATTTCAGTCGTGCTTGGATGCATAAATACAATGGGTTTTTTGGAGTAGGAAGCTG CTTCCATTGCACTTTGCAAATAGTTTTATTCGAAGTGTTCGAGGAGCCATATTATTGTTTTTGCAGCTAG ATCAGACAACTCCGCAACACAGTGAAAAATGCCGCTTCAAACTGTCCACCTGCCAACCAATAGAGGGCGC TATCCTATTAAATTTTGTTGGTATAGCAGAACGCCCCGGAATTGATGAAGGAACCAGGACAAAAATTGTA CAGATCCGTCAGTGAAGTGTTACATGCTTTGTATACATAACAGTCTTTGGTCACGGTGTTCGTTACAGTG ACTTTCTGAGTACGATGTAAACAGAACTCATCAACTGTATTATTTTTGCTACTTTTTACTAAATCTGTTC AATTGGAATTGAATGGATGTCACTGAAAATGTACATTTAATTTCAGTGAATGTCCTCTGAAGTTACAGCC CGCATCTGTAAAAAAAAAAAGAAATGGCCAAATAAGCCTTGAATATTCTCAAACATTCAACAAACCCACT TTGCTTACACTGGCTTTGTGTCACAATTGTTTTAGTTGATTTCGTCTGTTTACTCACTAGATTGTTGCCA TGGTATTTTGTATTAAAGTTAGAAACATTAGAACCTCTTGCATTATAGAACTTTTATTCTGTCGGTCAAT TCAATGAATTATAATTATGATCACTTCCCCCTAACTAAGGTTACAGTAGTGTTACATTTTGTTGTATTTT GAATCATGCTTTCGCAGTTTGGATATTATTACATCAGATTTTAGTTTGAAAACATAATTGCAAGTCTTTA AAAATTTTATTTTTTTTTTTTCCCAACAATTTTGTTATTTAAAAATTGACACACATACATTTAGAGCAGT TGTTATATTTGGTTTTTCATTTCTGTTTTGCCATTATCACTCAACTTGATTTTTTTCCAATTTTAATTGG AATTTTTTTTCCTTTCCTTTTTGGTGAATATATGCTTTCTATGTTTGTTCTTTTAGAAAAAACTTATATC AAGTTACCCTGTTAAGTTTGCATTCATTTTTAAGATTTGAGGATGTTGAAGTTGGGTAGATTATGATTTT GAGCCCTATATAAGGAAATATCGTTCATAACTTCTGATTGTGGTCACAATACACAAGTTGATGCAGCATG CATTTTGTACAGCATATATCAGGGCTGCTTGGAGATGGCCACATTAAACAGGTTGGGCTCTAAATGCCAC ATAGTCATTTCTCGTTAATTATAGTTGACAAGACTTGAAAGTTATTGAGGTGCTTGAATAGCAAACAAGG AAAGTAATATTGAATAATGAGTGAGGTTGTTTAAGACTGGAACATTTTGAGTTAATACTTATTGGGTGAC ATTTTTAAGCTTTGGTTAAATGATTTGCTTCTCTTTCAGTTTTTTCCCTTATTTGGTACTGGATTTTTTT TCATGAGCAAGCCTTGGAAGATTACTTAATGTTTGTTTTTGTTTTTCTGTTTGGATAATGTGGTCCTTGT GGGCCTATTTTTGTTACTTCTGTTTTCGTTTTGTTTATTAGAGGAAAATAATCGGTTTGACATGGCGTGC ACAAGCCTAATTCTGCGATTCGTGTAGTTCGTGTCTGTATGTTTGGTTGCCAAATTTCGCTGCTTCAACT ACACTCTGAAATTGAAGTACAGAAGCTATGCATCTGCATGTAATGCTGTCAGAGTCGTAGTTGGAATAAT AAGGTCCCTTTTATTCGTGTGGTAAAAAAAAATATCGAATCAACCTAAATTGTTCGTTTCATAGGTAAAA AAACTCATTGTCGAAAGAGCTATCTAAACAATTTTTAATGAAAGATTTGGATGCAGGTGGATTTTGTAAT CATGTTTGATTGGACGGGGGCACAATACGGGAACGAGGTTGACGTTTTCAACTGAGATAAGGACAAGGTA AAAATACCAAAGACTCTAGAGCTTCCCTTTTCTGGATGCGAGGTTGACAATATTTCTTAAACATTTAGAT TTTAAAAATGTCACCTTCAGTGCGTGCCCACTAATATGGCATTTTTATTAGTTCCTGTATTTCCATAAAC ATTTGAAATTTACACATTGAAAACAAATGTGCCATCCACATAAATATAATCACTGAATGCGGACCCTAAT TCGCCAGCCTCAAGGTTTTAAAAGCCATGAGAAAACTGATTGTTAATATGAACACTTTAATTTCATATTT TTTTTTAAAAGCAAGCTTGTAGATTACGCGTACTTAAAAAAAACCTGCTTTACATATAAAATGCATGCCA CTTTGAATATCGGTTAATTAAAAAAAAAAGAAGACCTACAGGTGTTTTTTAAGCACATTAATCAGACTAT AGGGCGGTGTATCATATTAACCATGACAGTAGACTTGCACAGTTATTGGAATTAGTTATTATTTTCCTAT TGTATGAGAATTATAATTAAAAAGATATTGGGCTTATTTCAGAAA
???blast.query.upload???
???blast.options???
???blast.eval???
???blast.eval.01???
???blast.eval.10???
???blast.eval.1???
???blast.eval.001???
???blast.eval.minus5???
???blast.eval.minus25???
???blast.eval.minus50???
???blast.eval.minus100???
???blast.numalign???
???blast.numalign.25???
???blast.numalign.1???
???blast.numalign.5???
???blast.numalign.50???
???blast.numalign.100???
???blast.wordsize???
???blast.wordsize.default???
???blast.wordsize.2???
???blast.wordsize.3???
???blast.wordsize.4???
???blast.wordsize.5???
???blast.wordsize.6???
???blast.wordsize.7???
???blast.wordsize.8???
???blast.wordsize.9???
???blast.wordsize.10???
???blast.wordsize.11???
???blast.wordsize.12???
???blast.wordsize.13???
???blast.wordsize.14???
???blast.wordsize.15???
???blast.wordsize.default.message???
???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
???blast.filtering???
???blast.on???
???blast.off???
BLAST time is limited to 30 seconds
