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Echinobase
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Echinobase Accession
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Echinoderm mRNA
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Echinoderm CDS
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
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BLAST Databases
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Download BLAST databases
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_011676031.2 PREDICTED: Strongylocentrotus purpuratus protein 4.1 (LOC764523), transcript variant X7, mRNA CGTACATCGTGTGTGCGTCCGTGTGAGTCGTTGAGTCGATGAAGCTGCTCCACATTTTCAGCGAGAAACC ATTTTGCCTAATTTGTGGATTATACTGGATATATCTATGACAAACAGTTGATGAACGCAGGATTGATTCT ATTGATGTTCAATCGGGTCTTTCAGAATTAACATATCTAACTCATAATGAGTGAACCAGCTCAAGAAGAG GGCTTTAGGGAACCTGACCCTGGCGAAGTAAGGGATGATGAGACGATACCAGAGCCCATGCCTAGCGACC GCTCCGCCCCTCCCAGGAACAACTCTGCTAACTCCCCTAGGAGACCAGTTACACAGAAAGGAAAGCTGCA GAAAGTCACCATCGTATTATTGGATGAAACAGAATTTTACTGTGATATTGAGAAACGTGCCAAAGGGGAA TCACTGGTAGACCTGATATGTGATCACATGGACATCGTTGAGAAAGATTACTTTGGCCTTACTTATAGAG ACTCACAAGACTGCAGGAATTGGGTCGACCCTATAAAGGAATTGAAGAGGCAAATGAAGAATGGACCTTG GTTATTCTACTTCAATGTCAAGTTTTATCCACCAGATCCAGCACAGCTCAAAGAAGATATCACAAGGTAC TTTCTTTGTCTACAAATCCGCGATGACATTCTGCGAGGGAGACTGCCCTGCTCATTGGTGACACACGCCC TCTTGGGTTCGTACGTGGTACAGAGTGAGCTTGGTGATTTTGATGCCGACAAGCATGGCATCGATACAGC CTACCTTGGTCAATTCCGCTTCGCTCCGGAGAGGAAGAAAGAGCTCGACGAGAAAGTCATGGAGTTGCAC AAGACACACAGAGGGCAGACCCCAGCTGAGGCCGATCTTCATTTCCTTGACAATGCTAAGAAGCTCGCTA TGTATGGAGTTGATCTACACCACGCAAGGGATTCTGAAGGAGTAGACATCATGTTGGGCGTATGTGCCAA CGGGCTGCTGATCTACAGAGATAGACTGAGAATAAACCGCTTTGCCTGGCCAAAGATCCTCAAGATATCA TATAAGAGAAACAACTTCTACATCAAAATTAGACCAGGAGAATTTGAACAATTTGAAAGTACTATTGGAT TCAAGCTGGCCAATCATAGGGCAGCTAAACGCTTGTGGAAAGTATGTGTAGAGCACCATACATTCTTCCG CCTTGTACATGCAGAACCTCCCAAGAAGAGACCCATCTTCTGGCTCGGCTCCAAGTATCGTTACAGCGGA CGAACACAGTTCCAGACCAGACAGGCTAGCGCCCTCATTGACAGAGATAGTCCAGCCGTGGAGAGAGGAG CGAGCGAGAGGCACACTAGAAGTTTAGATGGTGGATATGGATCATCACCACGTGACCCCGACAGGGCAGA CGAGGTCGTCACACCAGACAAGGCGCGAACGCTCGAAGCCCGCCCTCAGAGTGGCTACGAGGCACATGTT CCATACGTTGACAACAACGAGGATGAGAAGAAGAAATCACAGCGACTCGACTCCGAGGACGGGAGTCGCG ATGCGGAGATGGACTTGACTTCCGATGAGGGAGATTACGACGGAGAAACACAACAAGTGCGAAACATCAA GCTATCTTATTTCTCGAGGTCAGCAGATAACATGGCAAGCGGCCAGCCAGAGGGAGACGAGGAGAATCCT GATGAGGGTACCTTCCAGAAAGAAGTTACCACGGTAACCACTACCAAGACGACCACGTATACAGTAGAGA GAACAGGCGACCAGAATGGTGATGCAGTTCAGGAGACAACGTTTGGAGACGAGGATGAGCAGCCTGAAGC TGATCAGGTCATTCCAGACCAATCTCCTCAACAAATGACCCATGAGGAGGAGGACTTGACCCCAGACAGG GTCAGAGATGACTCACCAGAGCCAGTCTTGGCCGGTTCTGACCAGTTTGAACCGGTCAAGGAGATTGACT TTGACCAGCAGGAACCGGGTCAACCCAAAGCCGAAGAGGTCAAAGATGATTCACCTGATGATTCTCCTCT CCTTGCCCGTACATACCAGCCAGAACCAGTCCAGTCCGGTTCTGACCAGCCCGAACCAGTCAAAGAGACT GAATCCAACCAGCAGGAACCGGTTGTGGAGGAAGAGGTCGCTAGAATGGAAGTTAGTGGGGTTGAATCGA CCCCCGACCGTGGTGTAGGAGGGGAGGTTGCCATGGTAATCCGCCTTGGTGATGGGGAGGAGCAGGAGGA GGAGGAAGAAGAAGAGGATGAGGAAGAAGAGGAGATGATGGCCGCTGCCCAGCCCGACGTCGAAGACGAG GTCTCACCGTTCGTCAAGACGGCCATGCTGGTCCAGCAGCAGCAGAGCTCCGAAGACGACTCCAAGCTCA CCAGGGACGTGCCGTACGTCAAGACGGAGAACACCACCATCACCTACGAGAAGGACCCGGAGGATGCGGT GGACGGCGACGAGGATCCGGGAACCCTGATCAGCGCCCAGACCATGACGAGCGAGACGAGGTCAATGACT ACAACCACTCATATTACCAAGACTGTAAAGGGTGAGCTGACTGAGACGAGAGTTGAGAAGAAGATTGTCA TCCAGGCGGACGGTGACTTAGATCATGATAAGGAGATGACGGAAGCCCAAGTACGAGCTCTGTTAGCGGA GACTCTAGCCGAGGAGCAGCTTCAGAACCCTGACTTCCAGGTCACCCGTATCGTCATCCAGAAAGAAGGA GAGGAGATCAACGGAGATGTGGAAGAGGAGGCTCAACCAGCTCAGGATTAAGCTAATCCACACTTATCTA ATCCACACTAATCTAATCTCTGTAATTCTACATAGCCACATCTTCCTATATAAGTACTCTATGTCATAAG ATGCCCAGGTCACTATCAAATTTATTTGGAAGGCGAACTTGACCATAATCTCCACATAATTTCTTTTTTT AATAGTTCCGATTTAATTGAGCCTAATGATATCTTGATCTAGAATGTTAAAAAATATATTATGCAGTAGG TGATGTTTGTTCAAGAGGATGATCTACTCTAAGACTGAAAACAATTACATATTTAAAGAATATTGACTGT AAAAAGTCCTATGAAAATACAAAATACAGACCAAAAAGAAACAAAAATTTATAAAGATGTACAATGTAAC TCTAGTCTTGATATCAAGAAATGAGATTAAGTAGAGCTGTAGTCTAGTCTAACCTTTAGATTTAGATGTT TCAAGCTTCAGTGCATCTAGAAAAGATCTAAGTAATAGTTGTTTTTACAATTTTTAAGAAACAATATCTC CTGTATACCTTTTTGAGATAAGGTCTATTGCAAATGCATTCTTGCTCGTAGACTTAGTTGCAATGTTTAG AACTGAAATAGGAAGAATGGTTGATTGATTATCCGGTTGAGAATCGAGTATGTACATCAAGTCATCTACA AAATGGTTTATGAAGAAACACTGTCATTGAACAAGCAAGATATTGTATTCTGGTAAGGGGAATCAGGAAA AAGGTGAAAAGAAATTTTAATGTATTAATATCACTGTCAATCTATCATCGTGTAATAAGGTACTCTTTGT AAAATTTATTCAAACAATTTTTCAATTTCAGATGTAGTTGTCACATGTTGTGTAATGGTACCATTTTTTT CTACTGACGTATGAACATAAAAAACTTATCATCAAACAAAAAGGTATGGCATAGAGAGCAAATCAAACGT TTTTAACCATTTAGGCGCAACAGTGTGAACATGATTAAAGATGAAAGTAAACGCTAAATTTAGGATTGGG ATGTGTCGGGTGAAAGGAAAGCACAAAGGAAAATAGATGCAAGTTTGTCATATTTTGTCACTTCATTGAT GATTTTAAAGCCGTTTTTGAAATTCGAATTTGAAATAAAATGATGAAATTGGCTGGTTCGTGTTGCTTCA TATTTGCCTGTATATATATAGCACCATTTCTGCCATTTTGTGATATTCATTCACTCACTTTAAAGATTAA TAGAAAAATATATATCTAAGCTTATACTCTTTTTGTATTCTTTTTTTCTGCTTACTAAGGTGTTGTAAGC AGTCTCAATAAACATGATCCTCTTAAATGATTTCCGATTCATATCGTTAATGCCAACATACAGTCAAACC TGTCTTAGTGGCCACCTCTTTATAAAGGCCACCTGTCTATAGTCGCCAGGAATTTCGTCTCTGTCAAGAA AGAAATGTGTGTCGTAGAACCTGTCTAGAAAGGCCACATGTCTACAGTTGCAACCTTCTTTTGGTTTGCC TAGGGTGACCTTTATGGACAGGTTTGATTGTAATTGAAAAGAGCCAGTACATCAGTGTATGCTTAGACTA ATTGAGAAGGCTTTGTGCGAAGATATAGTATAGGGTAGTATAACCTTGTTTTGGGCCTATACTGTATACA AAAAAAGATTACAGTGCCAAGTCTAAATGCCAAGTTAGAATTTGATAAGCGAGTTTAATATAATAGGACA ATCTTTAGGGTAACCTTGATTTAGTTCCTATGATTTTGTGAATATTTTGCACGAAATATGTTTTACCAAA AATCTAATGTAATTTGATTGTACCTGTACATGATTTGACTGAAATTTATCCTTAAGTATATGTTTTTTTT TCTTTCTTCATATGTCTTTAAGACTTTAATTTGATCGATTTATAATTAGATATTCTAATCATCATCATTT TTTTCTTTATATATTCTTAGTTCTATACGAGATTTGTTTGTGTATGATATCATTGCCAGGTAGTTAGGTA GTGGGTAATTTTTTTAACCAGTCCTGTTCAGTTCATGGATATCATGCGTTAAGGACGCATGGCTATGATT CTTGTAGGACTGTCTATTATTCCCAATGTTTTAATAATGAAATCCCTGAATGAAATGAATCAGTACTAAT TGTCTTGTGGATGTCGCCTCGGGGCAACAAAACAAAAAGACAGGTTGCATGTACTGCCAACTCTCGCGAC GTAAATTATTGCAAATCTGAGGAAATTAGTGCGAGATGTTAATTAACGTAGGATCAAAACATGACAGTTA GAGTTTGTATAGTAGTCAAAGAAATGGATCTATTCTCATGTGTAGGAATTGAGAATTTGAAAGATGATAA TTGTACTATTTGGATGGAATCATAACAGACATTCTTATTTCAATAAATGGAAGATTGAATGAATGTTTGT TGGACAGATGAAGCATTGACAGATATTGATGTAGTGATGGGCAAGTTGTTTATATATCAGGTTTTTTATT TGTCAATTCATATTATTAAAATAAAGCCTGCGTATTGGATAGCTCTTATTTAAATTGGAAAAGAAATGTT TAGATATTGTAAATTTAGATATAGTCTGTAAAATCTTGCTTTAATAATTTTTTTTCCTGCCATATCTTAT CACCATGTATCACACTTTTTTTTTTATCGGTGTGGTTTTGCCCACAATTGCTATTATGTAATAATTCTGT ATAATTTGCTTCTGCGGATTATGTAAATGCATTCTACTCGTTAAGGAGAGATAATTAAAAGATATTATTG GCCAGAAAGGATTCTTTTGGGCCATGTGGTGGATGAGGTCATCAGTGCAAAGAAGTTGTTAGTTGTGATA GTTGTAGTGTTGTTGTGGGTGGCAGGCAACAAGGCACCTTTCAAGCCTGGCTAGGTTGCTGTTTAGTTAT TGTAGGTGTTTGAAACTCTGTACAGATAAGAAATGCAAGCTGTGTATAAGTGTGAATTTTAGCAACTATC ACTTGTTTTATTCAAGGGAAAATCTTTTCAATATACATGTATCATAACTACATAACTAATTAGCTGCAAA TAAATAGTCAGTAGTTTAAAAGGAATCCTTTCAGCTTAATTGTAATGAAGTAGATTACGGTAATCTTGCC ATGAATTAAATAGCAATGTAAGTTAGCGGTGTATTGTTTTTATGACTTTCTTAGCCAGTTTCAATTTGAC TGATTTTAATTTTAAAACAAATGACAATAGACGCTCATGTATAGACGAGCTTGATTTTTACATTTTCATC TTTTAAACAGAGTGCTTTCCAAGCAAATTCTTTATACTCACTTTCATTTTGAAGATTTCTTTCTTTCACC CGTAGTCTGCAGACTTTGGGGAGAATTCATGCATAGATCGATTACATTTCCATGTCAAGTGAATTGAAGT TCTTTGATTTTTGTTTGTTATTAAATCAGTGTGTACTGAAGCTAACATATACCCTGTTTTGTAATGTTTG GAGTATGTATAAAACTCATAAAGATTGACACAACACATTTGTAAATGGTGGTTGTGATACAAATTGTTCC AAGTTCTGATGTACTGACAAATAAACCATGTAATTGTTGCCCCACACAA
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???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
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BLAST time is limited to 30 seconds