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Echinobase
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Echinobase Accession
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Echinoderm mRNA
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S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
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BLAST Databases
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Download BLAST databases
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_011676051.2 PREDICTED: Strongylocentrotus purpuratus protein 4.1 (LOC764523), transcript variant X12, mRNA ACATCGTGTGTGCGTCCGTGTGAGTCGTTGAGTCGATGAAGCTGCTCCACATTTTCAGCGAGAAACCATT TTGCCTAATTTGTGGATTATACTGGATATATCTATGACAAACAGTTGATGAACGCAGGATTGATTCTATT GATGTTCAATCGGGTCTTTCAGAATTAACATATCTAACTCATAATGAGTGAACCAGCTCAAGAAGAGGGC TTTAGGGAACCTGACCCTGGCGAAGTAAGGGATGATGAGACGATACCAGAGCCCATGCCTAGCGACCGCT CCGCCCCTCCCAGGAACAACTCTGCTAACTCCCCTAGGAGACCAGTTACACAGAAAGGAAAGCTGCAGAA AGTCACCATCGTATTATTGGATGAAACAGAATTTTACTGTGATATTGAGAAACGTGCCAAAGGGGAATCA CTGGTAGACCTGATATGTGATCACATGGACATCGTTGAGAAAGATTACTTTGGCCTTACTTATAGAGACT CACAAGACTGCAGGAATTGGGTCGACCCTATAAAGGAATTGAAGAGGCAAATGAAGAATGGACCTTGGTT ATTCTACTTCAATGTCAAGTTTTATCCACCAGATCCAGCACAGCTCAAAGAAGATATCACAAGGTACTTT CTTTGTCTACAAATCCGCGATGACATTCTGCGAGGGAGACTGCCCTGCTCATTGGTGACACACGCCCTCT TGGGTTCGTACGTGGTACAGAGTGAGCTTGGTGATTTTGATGCCGACAAGCATGGCATCGATACAGCCTA CCTTGGTCAATTCCGCTTCGCTCCGGAGAGGAAGAAAGAGCTCGACGAGAAAGTCATGGAGTTGCACAAG ACACACAGAGGGCAGACCCCAGCTGAGGCCGATCTTCATTTCCTTGACAATGCTAAGAAGCTCGCTATGT ATGGAGTTGATCTACACCACGCAAGGGATTCTGAAGGAGTAGACATCATGTTGGGCGTATGTGCCAACGG GCTGCTGATCTACAGAGATAGACTGAGAATAAACCGCTTTGCCTGGCCAAAGATCCTCAAGATATCATAT AAGAGAAACAACTTCTACATCAAAATTAGACCAGGAGAATTTGAACAATTTGAAAGTACTATTGGATTCA AGCTGGCCAATCATAGGGCAGCTAAACGCTTGTGGAAAGTATGTGTAGAGCACCATACATTCTTCCGCCT TGTACATGCAGAACCTCCCAAGAAGAGACCCATCTTCTGGCTCGGCTCCAAGTATCGTTACAGCGGACGA ACACAGTTCCAGACCAGACAGGCTAGCGCCCTCATTGACAGAGATAGTCCAGCCGTGGAGAGAGGAGCGA GCGAGAGGCACACTAGAAGTTTAGATGGTGGATATGGATCATCACCACGTGACCCCGACAGGGCAGACGA GGTCGTCACACCAGACAAGGCGCGAACGCTCGAAGCCCGCCCTCAGAGTGGCTACGAGGCACATGTTCCA TACGTTGACAACAACGAGGATGAGAAGAAGAAATCACAGCGACTCGACTCCGAGGACGGGAGTCGCGATG CGGAGATGGACTTGACTTCCGATGAGGGAGATTACGACGGAGAAACACAACAAGTGCGAAACATCAAGCT ATCTTATTTCTCGAGGTCAGCAGATAACATGGCAAGCGGCCAGCCAGAGGGAGACGAGGAGAATCCTGAT GAGGGTACCTTCCAGAAAGAAGTTACCACGGTAACCACTACCAAGACGACCACGTATACAGTAGAGAGAA CAGGCGACCAGGATGAGGAAGAAGAGGAGATGATGGCCGCTGCCCAGCCCGACGTCGAAGACGAGGTCTC ACCGTTCGTCAAGACGGCCATGCTGGTCCAGCAGCAGCAGAGCTCCGAAGACGACTCCAAGCTCACCAGG GACGTGCCGTACGTCAAGACGGAGAACACCACCATCACCTACGAGAAGGACCCGGAGGATGCGGTGGACG GCGACGAGGATCCGGGAACCCTGATCAGCGCCCAGACCATGACGAGCGAGACGAGGTCAATGACTACAAC CACTCATATTACCAAGACTGTAAAGGGTGAGCTGACTGAGACGAGAGTTGAGAAGAAGATTGTCATCCAG GCGGACGGTGACTTAGATCATGATAAGGAGATGACGGAAGCCCAAGTACGAGCTCTGTTAGCGGAGACTC TAGCCGAGGAGCAGCTTCAGAACCCTGACTTCCAGGTCACCCGTATCGTCATCCAGAAAGAAGGAGAGGA GATCAACGGAGATGTGGAAGAGGAGGCTCAACCAGCTCAGGATTAAGCTAATCCACACTTATCTAATCCA CACTAATCTAATCTCTGTAATTCTACATAGCCACATCTTCCTATATAAGTACTCTATGTCATAAGATGCC CAGGTCACTATCAAATTTATTTGGAAGGCGAACTTGACCATAATCTCCACATAATTTCTTTTTTTAATAG TTCCGATTTAATTGAGCCTAATGATATCTTGATCTAGAATGTTAAAAAATATATTATGCAGTAGGTGATG TTTGTTCAAGAGGATGATCTACTCTAAGACTGAAAACAATTACATATTTAAAGAATATTGACTGTAAAAA GTCCTATGAAAATACAAAATACAGACCAAAAAGAAACAAAAATTTATAAAGATGTACAATGTAACTCTAG TCTTGATATCAAGAAATGAGATTAAGTAGAGCTGTAGTCTAGTCTAACCTTTAGATTTAGATGTTTCAAG CTTCAGTGCATCTAGAAAAGATCTAAGTAATAGTTGTTTTTACAATTTTTAAGAAACAATATCTCCTGTA TACCTTTTTGAGATAAGGTCTATTGCAAATGCATTCTTGCTCGTAGACTTAGTTGCAATGTTTAGAACTG AAATAGGAAGAATGGTTGATTGATTATCCGGTTGAGAATCGAGTATGTACATCAAGTCATCTACAAAATG GTTTATGAAGAAACACTGTCATTGAACAAGCAAGATATTGTATTCTGGTAAGGGGAATCAGGAAAAAGGT GAAAAGAAATTTTAATGTATTAATATCACTGTCAATCTATCATCGTGTAATAAGGTACTCTTTGTAAAAT TTATTCAAACAATTTTTCAATTTCAGATGTAGTTGTCACATGTTGTGTAATGGTACCATTTTTTTCTACT GACGTATGAACATAAAAAACTTATCATCAAACAAAAAGGTATGGCATAGAGAGCAAATCAAACGTTTTTA ACCATTTAGGCGCAACAGTGTGAACATGATTAAAGATGAAAGTAAACGCTAAATTTAGGATTGGGATGTG TCGGGTGAAAGGAAAGCACAAAGGAAAATAGATGCAAGTTTGTCATATTTTGTCACTTCATTGATGATTT TAAAGCCGTTTTTGAAATTCGAATTTGAAATAAAATGATGAAATTGGCTGGTTCGTGTTGCTTCATATTT GCCTGTATATATATAGCACCATTTCTGCCATTTTGTGATATTCATTCACTCACTTTAAAGATTAATAGAA AAATATATATCTAAGCTTATACTCTTTTTGTATTCTTTTTTTCTGCTTACTAAGGTGTTGTAAGCAGTCT CAATAAACATGATCCTCTTAAATGATTTCCGATTCATATCGTTAATGCCAACATACAGTCAAACCTGTCT TAGTGGCCACCTCTTTATAAAGGCCACCTGTCTATAGTCGCCAGGAATTTCGTCTCTGTCAAGAAAGAAA TGTGTGTCGTAGAACCTGTCTAGAAAGGCCACATGTCTACAGTTGCAACCTTCTTTTGGTTTGCCTAGGG TGACCTTTATGGACAGGTTTGATTGTAATTGAAAAGAGCCAGTACATCAGTGTATGCTTAGACTAATTGA GAAGGCTTTGTGCGAAGATATAGTATAGGGTAGTATAACCTTGTTTTGGGCCTATACTGTATACAAAAAA AGATTACAGTGCCAAGTCTAAATGCCAAGTTAGAATTTGATAAGCGAGTTTAATATAATAGGACAATCTT TAGGGTAACCTTGATTTAGTTCCTATGATTTTGTGAATATTTTGCACGAAATATGTTTTACCAAAAATCT AATGTAATTTGATTGTACCTGTACATGATTTGACTGAAATTTATCCTTAAGTATATGTTTTTTTTTCTTT CTTCATATGTCTTTAAGACTTTAATTTGATCGATTTATAATTAGATATTCTAATCATCATCATTTTTTTC TTTATATATTCTTAGTTCTATACGAGATTTGTTTGTGTATGATATCATTGCCAGGTAGTTAGGTAGTGGG TAATTTTTTTAACCAGTCCTGTTCAGTTCATGGATATCATGCGTTAAGGACGCATGGCTATGATTCTTGT AGGACTGTCTATTATTCCCAATGTTTTAATAATGAAATCCCTGAATGAAATGAATCAGTACTAATTGTCT TGTGGATGTCGCCTCGGGGCAACAAAACAAAAAGACAGGTTGCATGTACTGCCAACTCTCGCGACGTAAA TTATTGCAAATCTGAGGAAATTAGTGCGAGATGTTAATTAACGTAGGATCAAAACATGACAGTTAGAGTT TGTATAGTAGTCAAAGAAATGGATCTATTCTCATGTGTAGGAATTGAGAATTTGAAAGATGATAATTGTA CTATTTGGATGGAATCATAACAGACATTCTTATTTCAATAAATGGAAGATTGAATGAATGTTTGTTGGAC AGATGAAGCATTGACAGATATTGATGTAGTGATGGGCAAGTTGTTTATATATCAGGTTTTTTATTTGTCA ATTCATATTATTAAAATAAAGCCTGCGTATTGGATAGCTCTTATTTAAATTGGAAAAGAAATGTTTAGAT ATTGTAAATTTAGATATAGTCTGTAAAATCTTGCTTTAATAATTTTTTTTCCTGCCATATCTTATCACCA TGTATCACACTTTTTTTTTTATCGGTGTGGTTTTGCCCACAATTGCTATTATGTAATAATTCTGTATAAT TTGCTTCTGCGGATTATGTAAATGCATTCTACTCGTTAAGGAGAGATAATTAAAAGATATTATTGGCCAG AAAGGATTCTTTTGGGCCATGTGGTGGATGAGGTCATCAGTGCAAAGAAGTTGTTAGTTGTGATAGTTGT AGTGTTGTTGTGGGTGGCAGGCAACAAGGCACCTTTCAAGCCTGGCTAGGTTGCTGTTTAGTTATTGTAG GTGTTTGAAACTCTGTACAGATAAGAAATGCAAGCTGTGTATAAGTGTGAATTTTAGCAACTATCACTTG TTTTATTCAAGGGAAAATCTTTTCAATATACATGTATCATAACTACATAACTAATTAGCTGCAAATAAAT AGTCAGTAGTTTAAAAGGAATCCTTTCAGCTTAATTGTAATGAAGTAGATTACGGTAATCTTGCCATGAA TTAAATAGCAATGTAAGTTAGCGGTGTATTGTTTTTATGACTTTCTTAGCCAGTTTCAATTTGACTGATT TTAATTTTAAAACAAATGACAATAGACGCTCATGTATAGACGAGCTTGATTTTTACATTTTCATCTTTTA AACAGAGTGCTTTCCAAGCAAATTCTTTATACTCACTTTCATTTTGAAGATTTCTTTCTTTCACCCGTAG TCTGCAGACTTTGGGGAGAATTCATGCATAGATCGATTACATTTCCATGTCAAGTGAATTGAAGTTCTTT GATTTTTGTTTGTTATTAAATCAGTGTGTACTGAAGCTAACATATACCCTGTTTTGTAATGTTTGGAGTA TGTATAAAACTCATAAAGATTGACACAACACATTTGTAAATGGTGGTTGTGATACAAATTGTTCCAAGTT CTGATGTACTGACAAATAAACCATGTAATTGTTGCCCCACACAA
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???blast.matrix???
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???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
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BLAST time is limited to 30 seconds