Click here to close
Hello! We notice that you are using Internet Explorer, which is not supported by Echinobase and may cause the site to display incorrectly. We suggest using a current version of
Chrome
,
FireFox
, or
Safari
.
Echinobase
???banner.login???
???banner.register???
Contact Us
Cite Echinobase
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
BLAST
Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
JBrowse2 Tracks
Genes
Gene Search
Gene Search Tips
Gene Nomenclature Guidelines
Gene Name Questions
Expression
Search Anatomy Items
Quantitative Expression Datasets and Plotting Tools
Anatomy & Development
Search Diseases
Echinobase Anatomical Ontology (ECAO)
L. variegatus
Atlas of Development (pdf)
Resources
Protocols, Reagents and Data on EchinoWiki
Resource for Developmental Regulatory Genomics
Davidson Lab Gene Regulatory Networks
Libraries, Vectors and Screening
BAC Table
???header.navigation.searchAntibodies???
???header.navigation.searchMorpholinos???
Guide RNAs (gRNA)
Cis-Regulatory Elements (CREs)
Literature
Papers
Books
Cite Echinobase
Community
Find People
Find a Lab
Organizations
Job Postings
Downloads
Data Download
Gene Page Reports
Browse Download Site
BLAST Databases
???blast.header???
Download BLAST databases
???blast.alignment???
???blast.program.blastn???
???blast.program.blastp???
???blast.program.blastx???
???blast.program.tblastx???
???blast.program.tblastn???
???blast.database???
-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_030979745.1 PREDICTED: Strongylocentrotus purpuratus guanine nucleotide-binding protein subunit beta (LOC115917973), transcript variant X2, mRNA AGGACATACATGTCAATGTAGCAGGCCTGTGGAAGTTCCGTGTTTTGGGAGGCATCGGTTTATCATCAGT GCTATTTGGATTATACACATCTGCAGCTATTCGGTCCAGGTTGGTTTTATCCCAAGGCCATCCTGTTGAT CATTTCTTTTTTTATTAGGTTCATATTTTATTTAGGTAACAATGGCGACTGAATTAGAACATCTACGGCA TGAAGGGGAGACCTTAAAAAACCAAATCAGGGATGCCAGGAAGGCTGTACAAGATACCACATTGATGCAA GTCACACAGAATATGGATCCAGTTGGAAGAATTCAAATGAGAACTCGTCGCACACTTCGGGGTCATTTGG CAAAAATATACGCCATGCATTGGGGTACAGATTCAAGTGCAAGCAGAAACCTAGTGAGTGCGTCACAGGA TGGCAAATTGATAGTCTGGGATTCATACACAACTAATAAGGTGCATGCAATTCCATTGCGGTCCAGCTGG GTGATGACCTGTGCCTATGCTCCTACCGGTAGTTTTGTGGCCTGTGGAGGTCTCGACAACATATGTTCAA TCTATAGCCTCAAGACCAGAGAAGGCAATGTTCGTGTAAGCAGAGAACTCCCAGGACATACCGGTTACCT ATCATGCTGCCGATTTATCGATGACAATCAAATAGTAACTAGTTCAGGAGATATGTCATGTGGCCTTTGG GACATAGAAACCGGACAACAGACCACAGGCTTCACGGGCCACACAGGTGATGTAATGAGCCTCTCCCTCT CGCCAGACAACCGGACCTTCGTCTCCGGAGCCTGCGACGCCTCAGCCAAACTCTGGGACATCCGGGAAGG CATGTGCAAACAAACATTCACAGGCCACGAGTCAGATATCAACGCTGTAACATTTTTCCCTAATGGATAT GCATTTGCCACTGGGTCAGACGATGCGACCTGCCGCCTATTTGACATCCGCGCTGACCAAGAACTCATAC TCTACTCACATGACAACATCATCTGCGGAATTACGTCGGTGGCATTCTCAAAGAGCGGCAGGCTGCTGCT AGCTGGATATGATGACTTTAATTGCAATGTGTGGGACTCCATGAAGGGCGAACGAGCTGGTGTACTGGCT GGCCACGACAACAGAGTGAGTTGCTTGGGAGTGACAGAAGACGGTATGGCAGTAGCGACAGGATCTTGGG ACAGTTTCCTCAAGGTCTGGAACTGAGGATGGATCAGTGGTGGGCGAGCCACCATCACTTTAGAAAACCC TAGCAGAGTTTGTGAGAATATTAAACAAAGAAACACTTTTTAAAAGACATGTGGAATGCTATGTATCACC ACCACCTTCAACAAAACAAAAAAATTAATCTCCAGCAGGCATCTTTAAGAAAAGTTTGAATCACTTACTT ATACACGTAGCGTTAAACGAGACTCTGAAAATGGAAAAGAATTCACCATGTAATCTTGATTTAATAATTA TTCATATTCTTGATGAGTGTTTATGTGAGAGAGAGGTTTAAAAACTAGACATTCTCTGCAAAAGTTGCAT CATGTTTTTTCAAGATTTTAAACCATTTTTTTTCCTTTCTTTTTGTTAGTTTGTTTTCAAAATAATGTAG TAGTGTAGAGACATGTTACATGTGACGTCAGCTTACGAAAAAAAACTATACCGGTGACGGATGTCTGTGT TCTCACCATGGCAGCTAGTTGGTAGCACGTGTCGATTTTGACGCGGTGTGTGATTCTTCTGTGGACTAGC TTTTTGCTACGAACAGGGGCCCCAACCGATTATAATTCTCTTTGTGATTAATTAGATGTGAACGAACGGG GTGGGTTTTATTATGCTCTGGAAGGATAAAAACGTTAAAAAACATGAAAAACAAGTGGGTGTGTTGTATG GCAAAAACGTAGATGTGGATAATATATCTCTTTCTTATTTGTGTGCGTGTGTGCGCGTGCGTAATATCAA TTGTGAGTATGAGTGCGAGTTATAAATGATGGAAAAAAGCCTCTTGTTCATATTATCATTTCCCATCCTG CCACTGAATTTCTCTCGGTTCTGTTGTCTTCATTCACCCTCTTTTTTTGTATAAAGAAAAACCCACTAAC TTTATGATGTACTGTTGGTTAGCTTATCAGCTGTATCTAAAAAAATTATTGAAGAAAAAAAAAATACAAA AAAAATACAAAAAAAAAACTCTTTGAGGCATGGACTTTTGTCTTAAACGTGTAACATCTTTTTAAAGAGA TGCCTAGTCCTCGTCCATCCTGTGTATAGACAGTGTATATTCTGACCTGTTACAAGTGAATATTTAAATT CTTACAATGATTAAGAGGAGAAAAAAAACTGTATGTGCCTAATTCGTGCACATGTCAGTACTGCAAAGTA GAGTAGTTCATAAATTGAATGTTAAAAAAAAAATATCGAATGTTTGTCAGCTGCTGGTTATACATTCAGC CGAGTAGCAGTCATTTCTATGTTTGTCTCTTGCTATTGATATTGCCTCCAAACGTTATAAAAACAAAACG TCGTAGATCGTTTCAGCACGTTTTCGTTTTGTTTTAATTTTCCTTTTTTTTTTTTTTCAATTTCTCTAGC ATATGTAGCATGCACACCAACCATTTTTCAATGAATTGTACTGCATAGCCAAAGTGCTATGTGAACATGT TTGTATAGACCACCTAATACCACCTAGATATAGTCTTTGTATGTGAAACGGTGAACTTTCTTTTCCATTT TTGGAACGTGTTTAAATTGAAATGCAAATTCATACAACCTTCTAGGTGGCGTTGTCTACAGAAGTTTCGT GCTCATATATATATTTTTTTTCTCTCTCTTTGGTTTCAGTTTTATATTTGTGTATGGAATAGTGCAATGA TTTGGGGTCCAACGTCGACAACAGAAGTGTACGAAGGGAAAAAAAATGCCAAACTAAGTTGGAACTCAAT AAGTTGTTACACATGTACAAGTCGAAAGAGGAAGTGCTCAAATTGGCACCTTCTTCCTCGCAAACAAACT ACAACCCATTTTTTTCCTTGTGTATATATATATATTAGCTCGTGTGTCTTTTGCTTGACTAGTTTTTTTT TAAAAACAAAAGCACATGTCCTTTGCACATATGCAGACTTGTATTAGAAATGGAAGAATTGGCTACCACA ATGGCATGATGGATGTAATAGGCATTGGGTGCTTGGGAGTAAGGCGTTGGGAGGTTTTCTTGATTCTCTT TACCTGTACATGCTAAGATCCAAAGCATTAAAGATCTAGGGCTGAGATAAGTTAATTCATGCCGAATTAC ATGTCTTTGTTTATCAGGAGGTACTGAAGGTTATTCCTGTGCGTACCTAAAATTAGGATATTTGAAAAAT CGGCAGAGGAGTTGTTCTGCCATATTTGTTTTTTGTAAAAAACTGTAGTCGAAAGCTATGCTCAGATCCA GCATGTTAAGTACGGTTGAACAGTGTGGAGATTAACATGCCCAAGTGAATCTGGGAGTCATTAACAAGGT ATGTGCGAGTGTGCAAGTGTTGGGGGCGTTTATGCAATACGAGCCTGTTCACAATGCCCAACTACCCAAA CAATACAGATTGTGTTGATGATGAACATGCAGGCATCTTATCTATTCATACTGCTTCGGTCAACTGCACA TGACTGTGATGCCACAAGTTAGAAATCTATGAACAGTGTTAACGTTCTTTGACGTTTCTAGCTTTCTGTG TGTGGTCACGCATGTGCAGGTCATTTGCTCTGATAGGTTGGGCAGTGTGAACTGGGCCGAGGAACGTTGC ACTGAATCAGATCCAGCGTGTTGTGCTCCACCCTATAAAAGCGTCTTCATATGGTAACAATGTATTGGAG ATGTACTACTAACTCCTATTGGCAGCTGCATGTCTCTCTTGTCATCCACTACTTGTAATGTTCTCTTTTT TATGTTTTCATTTACACAAGCAATTACACAACAAAAATTTCTTTTTTTTCAACATTTATTTTTATTTTTA TTTTTTAAATACATGTATAAGCATCTCTTTGTGTGTTGTTGTAATTTGTAGATTTGCTGATGCACAAATA TGACCTTTTTTCGGTTTAAGGAATAAGAAATTGCCGCTGGCTAAATAATGGATGTATAATTGATTGTTGC TTCTCTTGAGGGTGGTGTTTATCTAACATTCTGTGGAAGAAAAGTGTGTTTACTTGATTTAAAAAAAAAA ATAAAGATAGAATTAGCATAAGTCATATCGAAACGGTTTTCTGGACGTGCTTAGTAATTTATTGAATACA TTCAGATTCTTCTTTTTCCCTTTCTTATGTGTCCCGTGCCCCCTTGCCTCCCGATGGCATTACAATGCAT TTTAGCTGGGCTGTAAAACTATGTAACTAATTCAGAAGAAGAAAACAAAAACATTTGATGTGATCATTGC ATTTGAATTACTTTTTACAACTTGTTTGATGAAGTCGATCTCAAATTTCCGAAGAGCAATCTTTTTTGCA AATTGTTGAATTTTTTTCTTGTGTGAAGTATTCAGATGCTCTCACCGGGGATAGATAGAAATCGTGTCTG TTAAAACTGAGAACTGAGAATCATGTTCTTCATCTTGTTTGTATAAATATGGACGTTTGACTCGGCAGAA TAAATGAAGTGTGTTCTGATATTATGTAGAATTCAAGATTTTGTATGAGTAAATGGTAAATAAATGAAAT AGATGTAATATGGCTTCTGTCAATATTATATTTTACTTGAATTTCTCCTCTGCACCTTAAAATTTAGGAA TTGAATATATTCTGGTTTTTTAAAAAGATGAATAAGAAAGTAAACTGTATCTTGTTTGATTTATTGAAAA TTGAAAAAAGGGAATATCTGCCCCTCTCCTTTTACATGGTAAAGTAATGTCCATCTCATGAGTGTTGAAA TCCAGTTGACCAAAATTTGTATTTATTGTGTTCAAAAGAAGAAATGGTATCTTTTTATGTACAAAAGTAG GATTGATTATTCTTAATTTATTTATTTTTGTTTGTAGGTGTACTTTTGATGTGTTTTTAGTGTTACATGC AAAGAGAACGCAATTTGGAAAATGATGCAGATCAGATCATGGGAGATTTAAAAACAAAATCTTTAAATAA CTCAATTTGAATTCTGACCGACTGTTCTCGTGATAGTCGCAATTGAATTCCAATATGCCTTTTATAGATC AAATTTGAGAAAGATCGGATGTGGCAGACACTGCAAATATCATGTGAAGTTTTTCTTTCACCTGTATGAA TGTTTGTCTGAGCTTATAATGTACTCACTATCCGCTTACATTAGCTCAATTAGCTGCACACATTTGAAAA TACTGCAGATTGTTACTTTGCATATTTTACTTATCAGGATGAAGATATCGTAGCTGTTGACCCAACACTG TCGGCATTTCATTAACAAAATTAATATTGATGGCACTCGTTCCATTTTAAACAAATTTATTGTTATTATC TTTATTATTACTATTATTTTGTATTTGCCTTCGTCCTCATAAAGATTCTGTTTGTTTTTACTTTGAAGTT AACCCTTGTGTATTGATAATTGTCAAAAAGAAGAAAAGAGAATTAAAAAAGTATAATATATTTGTACAGT TGTTTGCTATATAGGTACTATACGACCTTGGGGGTTTTCCATTCCTTTTTCATTGTATACTCGGCTAGGA ATGTACAGTTTTTTCTTGCTAATGTATACCATTTTTGCCAACAAAAACTATAGAAAAAAAATACAAAAAA AATATGAGAGAGAATGTTGGCTACTTAGCTAATCATTGTAGTTTGCTAGATTTGTTGTTATATTTGAGCA CAGATAAGCTGGAGAAGATGAATTTTGACAAACAAAAAAAGAGAAAATGTAATTTCAATTTTTTTTTCTT GTATTGGTAGCAATTTACAATGTATGGTGTAAAAAACATCAGGCCTTTACTGATCTGTACGCAGGAGCGG GGTTGCGAAAATGCACGCTTCCCGGGTTCCGACGTGGATTCTTAAGCGGCACTTTTTAATATAAATCACT GGAGCTCCGGCTCCGCACGTAGGAATCGCCATGACAGCGTAAATACATGGCAAGATTTTGATCTTTCTAG TCGTATATGTAGAGAAACGTGGGACATTTTTTAATATTATTATTGTATAATTAGCCTATTGTAAAGTTAT TGAATTATGTCAAATAAGTGACGCTTGTTGCTCTTGCAAAGCAACGGTCAAAAGGTGTGGCTCACAATGC TCTCTTTACACAGAAAAAAAAAATTCATTGGTGTATGTGTTGGAATGATGCCAATCAGAGAAGTTTTTCA AGTCGAGTCGAAACTTATCCTTAAAAAAAAAAGAAATCATGACGGCAAAGAGGGAAGGAGGAAACCTGCT CATTTTTGTAGTGACGTGAGCGAAATAAAACCAGCATTTGAGCTCTGTAAACTAAAAAATCTTGATTGAG ATTAAGGATGAGAGGGGACATGATTTGAGTAGGTAGAATAACGATTACTATTCAAGCGTCTTATTTGTTT GCAGCCTGATGTGTGAAAGTAGTGAATGTGTTTTGTGTATTAAAAAAAAACTGTTTGTTGGTCATACTTG TATATTGTACCCCCTCATTTCTGTAACTGTAAGATTGTGGGTTGAGCATATTGAATAAACCTGTTGTCTT TATCATA
???blast.query.upload???
???blast.options???
???blast.eval???
???blast.eval.01???
???blast.eval.10???
???blast.eval.1???
???blast.eval.001???
???blast.eval.minus5???
???blast.eval.minus25???
???blast.eval.minus50???
???blast.eval.minus100???
???blast.numalign???
???blast.numalign.25???
???blast.numalign.1???
???blast.numalign.5???
???blast.numalign.50???
???blast.numalign.100???
???blast.wordsize???
???blast.wordsize.default???
???blast.wordsize.2???
???blast.wordsize.3???
???blast.wordsize.4???
???blast.wordsize.5???
???blast.wordsize.6???
???blast.wordsize.7???
???blast.wordsize.8???
???blast.wordsize.9???
???blast.wordsize.10???
???blast.wordsize.11???
???blast.wordsize.12???
???blast.wordsize.13???
???blast.wordsize.14???
???blast.wordsize.15???
???blast.wordsize.default.message???
???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
???blast.filtering???
???blast.on???
???blast.off???
BLAST time is limited to 30 seconds