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Echinobase
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Echinobase Accession
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Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
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BLAST Databases
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Download BLAST databases
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>JT116673.1 TSA: Strongylocentrotus purpuratus WHL22.224445.0 mRNA sequence TGATAATAAGGTTATATTTAGTTTTAGAGGAAGGTTGCCAGTCGGGGTTGAAATGTCGTATGCTAGTCAG CAGTCCTACAAAAACAGGTTTCAGTTGTCGAGGACATTTTAATACAGAGTGTATTATTGATTTCCTTTGT GTTTGCATTGCGACTGAACCTTGATATTTCTAAGAGAGAAAAGGCCCGCTCTGAATAATTCCCTTTGCAA TACTGTAACGAGGGGTAAAAATCCATCTTGGTTGACCCCCTGCCACCCATACCCCAATCTCTGTGTGTAG TAGTAGATTCGCCCTCTCATCGCATCGAAGGCATTCGCACGCACGTGTCATGAAGCCACGCCCCTCGCGT GTCGAGAGGTCATTATCATGACGCAATTAGTAACTCCGCCAATGGCTACACGTGTTTCATGGGCCTGCAC CGAAACTTACACGACGTTTCAGTGGTTTGTTGCGTACGGGAGTGAATGTTTTCATTGCGATACGCACTCT GCATGCACTAGGCGAGCCTAGCCACCGCAGTGCTCTACTACAGATCTATGCTATTTACTAAACAAAGAAC TCCGAAACAGACTGGACATGGAACTGTTGTAGCTGTCGAAAACTGTGAAACTTGTTGCCAGTGAAACTCA AGGCAACCCATGCCAGGAATGTCCAGCACTTGACAGCGACTGTTCTGTTGCAAGGCTATACTACGGAACA TGAATGATATTGGCATCGTTTCCTTGCAATAAATTGTTCGTTCATTTTTCTACTTGGCTGTTTTTATTGC AGCTTATCTGTCTTGGAATTTACCTATTTTGAAGTCTGGAGTTATGATTCCTGCTTGGTCATCCAAGGAT TTTAGCGTTGATTTTGTCGAGATCCTGCAACAGAATTCATCATTGCTCAGGTTGATGATTCAAGAATCCA TTCCAGAAATGATGCTCAGCCTAAGGTTTCTAACGTCGAAATTCCGCGCACAGACACTGAATGAAGTTCA GCCATTCGATCCTGTATTATGCAAGATTTCAGGAGAAGAAATTGAGAACACAGATTCGGAAGAGGAAAAT CTAGAAGTAGAACAGTTGTTTCGAGAAAGAAGACTGTGTAACGGAACAATGGGACAAGTTCCAGGTCCTC TTCACATTCAGTTCCCATCTCTTGCCACAAAACCAAGACCCCTGGAAGATACATGTAACTCCTCGGAGAA TATTCTGTTGTCAACATCGGAAAGGAATAGCTCAGAAGAAGAACTTGCTTGTATGGACAGACCAGTGCCT GAGAAGAGAAAGTGGTCACAGATGAACCAGTGGAATAGGAACAGCGATGTTTCGAGTTCTAGTGATGAGG AAGTCAAAGATCTCTTCACAAAGACTGCATCACCTTTGCAATTCAGCACCTCACCTCCAAAGCATCTCTA TAAACTATCTCCAAAGAGGATAGACAGTAAAACTCATTTCATGGCCAATGTCATTAGTCCATCGTCAGGG GACTCTTGCTCACCTAGGAAAAGACACAGACATAGTCATCATGATACCACATTGCAGAGTGGCAGAAGGA TAGACTTTGAAAAAATGCAACAGAAAATGTTCACAAAGAGACACACGCTTCATGGGCATGGATTAAAATC AGCAAAGCTAGTTCGTATTAAGACCATTGCACTAAACAACAGAGTACCACCTAGGCTGCTGAGCGACCCA AACATCTGCTCTTTCCGCTCAATCTGTATCAATCCAATGACACCCGTAGAGGATCCATCACTAGCTGCTT ACTGAGATCTAACACTCCTAGAACTCTCCTAGAGATTGGCGTTGTGGTGTTACCTTTTGGTGTTAATCCT AACACCAACAGATGAAGTACAAGCAGTGCTAACAGTTGGATAGTTTTTGAGGCAAGACCATTAGATTTGG AACTATACCTAGTGGAACGAGGTAGTTATTCTTCTTTCTTGGTACTCCCGATTGGGTGTCGGCCTCACCA ACGCTAGCACTTGAATCGAACTAGAAAGCACCCAACCTATTGACTTGTACGAACGCAGAGCGGCAATGAG ATTGTTGGGCCATGTTATGATGGATGGGCAAACTAACCTTGTAGCTTTCACTAACAAGTGCACTCACACA ACATCGGCAGAACCTGACATGATGACAACATTCTACTAAACCACACTTAGAGGGCGCTGTTTGATCACTT ATGCGTATCTACCTGGAGATGCTGTAGCAAGCTTGAGAAAACACCACAGAAGGAAAGCTTTCAATGGCAG CTTACAGAAAGGACACTGGATGGGTATCTAATGCCAGTAGCTGACAAGGATGGCTTGACCGGAGGGATTT TCTACCGGGATGATTTGCAAAGGACGTCATCATCGGGAGATGAAAGGATCTTATGCCAGAGGCCTTGTCA TGAAGGATGTTGTCTCTTTGGAGATCAACCCTGTAGATAATCCTTGGGACTGATTGCTTCTGAAGCCAGA GAAGGAAGGCTATGTTGAGAGCTCAGTGATTGCAGCTGACATCACCGGATTAAGCTGTACATCGAAGGCT CCTTTCTTGAGTACTCATCAAACCATAACATGCTTAGACGCCTTGGATCTCTCAGCCAAACACGCTTTTC TAGGTACAGGTGCATCTCTTTTTCTTAGCAGAGAAGGAATGTAGTAGACATACTCGATGTCAAATCTTGA ACTACCTCTTTTTATCTGTCTAACAAATTCATGTATTCTTAATGGGTGGTGCACGCAGCATGGAAAAGCG ATATTAGATGAACTTTTTTTTTTAAATGCTAGTGTTTACACTTATTTGACTTTGTTAGATTTTCTCTTTG TGTCGGTAACAAACTTTCACAGAGACTCTCAGGTACTAAATTTGATTTCATCTTCTTGAGTCCAGTAGGG TGTTAATTCTTTCTGTAAAGTGAAATATATGTTAACACCCTACTGGCTCTTAGCAGATGATTTATGGTAA CAGAGTTAGCAGTTCTTCCATTGTATTGATACACACGAACAATAACCGCAACACAGCAAATGGAACTGAT ATAACTATGTTTAGATAAGATGGAAGATGTTCAAGCATGTATGATTCATGATACTTCAGTTGTAAGGACT GTTTAAACCCTTAAAAGCACATCGATCTCCACTTTCGGAAAAGAGTACAAATTTTGGTATTTGGGGTTGT ATTTGCAAAACAAATCTTTATATTAATCCTTGGTCTATAGATGAATATGAATAATCATACCAAGTTTGTA ATAAGTACACAAGTATCAGTACGTGTATGATAAACTTCTTATTTGCCATTGTGGTAAATACAGAGCTTGA CACAACCAGGGATGAAGTGCACAAACACACAGACCCCCAAAATTTGGTTCTGGACCCATAAGCTTTGTGC TTGTGTCCAGGCAACGCTACATGTACATGTACATCAGAATAATAATATGCATTTTCGTGAAAATATTATT GATAAATTATAACAACTTTGAATGTATGTTATGTTGATTTCAAATCATCTTAAAGCTGCGGTTTAAATCA GACCTGGATTGGCAGGGGAAGGTGCATTTACTATTAACAAAAACGATGTTATTCAGTTCCATTTGCTGTA CAAAGTAATCTGAATTGTACTTTTTCTAAGGCTATGATGGCTTTTTGACTAATAAATTTTTGGTTTCAAA TTCATAAATATTGGATGAGAAGGAAATTTGAGATAACTGAATTTGACAAACCTCTTTTTTCCAGTTTGGG TTATATTTTAAAAGGGTTTCACTTCTTTTCATATTTTATTTTGCATCATCATGAGAGATATTTGACATTG TACAGCCTAACACAAATTGATTATAGAATTGTGTCAGTGTCGAAATAATATAATCCACTCCTGAAAATGT TATGTTAGGTTTTCATTATCAGTGCCATAGGAGTCATTTTGATTTGTTGGAGGGAAGCAGTGTGAAAATG GAAGGGTATTTGCAACATTTGCTCACTCTTATTTTTTTAATCCTCTCCAGAGTTACTTTTCATTTCCATT ATTTTTGACAATTGATTGCAAAGATGTACATGACTCATGATATGAATTGCAATGAGGCTGATAAAACTCT TTATATGCAGATGCAAGTTTTATGATAGTGCAAGCTCAAGGACCAACTTTGATTTGTTGATATTCGGTAG CATTTTTTTCTATTCCTTCTCGTATGTTTTCTTTTTCTATAATTTAGTCAAAGAGACAACATTTGAAACA TTCATTTGTTTATTTATGCATTCGCAGTGCATCACAAATATGATATTTTATCAACTTTAATTTTTTTTAA ATATCACTATCGGTCATTTGATTATGTTTATGTTTGAATGAAGACTGGCCAATTATTAATCCATGTATCT CACGAAAGATTAGTGATACACATGTATTGCTCTATCAACCTATGATGTGTTTAGTATGTATTGCAGTATT CCTTCTGTATGTGTCTATTGTTCTTATTTCAAATGAACATGTTAACATGTTGTGCAGCTGTTAGGGATAA TATCTGTTCAAGGATTGTACATTTTAATGACTTCATAGTTCCATATAGTAAAGAATTATGATGTGGGTTA AGTATTACTTTGCATACATCTACAATTCATGTATTTGCATATTTGCATTTTTTTTTCATAACGTAAATTT CACTTATCTTGAATTCATTGTTTTTTTAATTCAGGATTTATTGCGATATCTGTTACGAACGTATAATGTG AGAAGAGTATATACTTTGATGATTCAATGCATTTATATATATTATAAAGATATTTCAAACAAATTCATAT ATATTGATTCATTACAAAGTGTTTGTTTTTAACATGTTGTACAAATATGTTTCTTATTAACAGAATCACT CTGCATATTCTATATCTAAACTCCATTTTAGCATCAAAGAAACTAATTGGATTCAGAGTTTGCCGTGCTT GTACAAAAGTTCGAATAATTCATTTTTTATTTTATTTATAAATAAATACCTGGAGCAAAGTTAGGTACTT ATAGCTTAAGAGCTTAAGAGGTCTGTTGATGAAAACACTGTGCAGGCAATATTTGATTTGCCATTTACTC CTAGAGATTATAAATCTTCTGCCAAAGACAATTCTTAGTGAGCTCTTCTCCAATAAATCAGATTGTTGTA ATTGAATGGCAGAACTTAGCAGTATGACTTGATATCGATTTGCATACTCAAAGTTGCAAGAGATAACGTG ATTATTATATATTATGATGTTGATTTAAAGAAGACATATATTGAGCTGGTATGAAATGGTATTAGCCATA TTTTTTGCTCGTTTATGATATATCATTGACAAAATGAAAGCATATATTTTATTTGTATTTCCTTCATGCT GTTTGCTATGCATGAATACAGTGTGGGTGAATCTACTCTCAGCGTACGTACGGCAAAAGGAGGTGGCTTT CTAAAACATTTTTTTTTTATTGAAAGATCTTGATGTAATTTTTTCCTTCTTCAGAATTGTTCCTTTCTTT TTACAAGATGAAAATATTTCATGATTGATATTGTTGACAGAGGATTAGTGAACAAAACAATTTATAGTGC CTGGTTTTGTGACGAAGAGAAAGAGAGCATGCGCGTAAGAGATTTGAGGGAAATGAGTGAGTGAGAGAGA AAGGAGAAAATGTAATGTTGAAAACGGTCATGGTTTTATTGGCGAAGATGACTTGATTGATACTTGCTTC ATATGTATTTCAGGTATAAAAAAAAAGTTTTATATGGTACTGTGATGTAATTTGTAGTCATTTTAGTGAT GGTCACTGGTATTTTGGGTACAGTGATCCATCATTATATCTACCTATTTTTCCAGATATGCTTTGAACTG TGACAGATGTCACTAATAAAGACAAAAGTATTTAAAGAAATT
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???blast.matrix???
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???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
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BLAST time is limited to 30 seconds