Click here to close
Hello! We notice that you are using Internet Explorer, which is not supported by Echinobase and may cause the site to display incorrectly. We suggest using a current version of
Chrome
,
FireFox
, or
Safari
.
Echinobase
???banner.login???
???banner.register???
Contact Us
Cite Echinobase
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
BLAST
Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus
(Purple sea urchin) 5.0
L. variegatus
(Green sea urchin) 3.0
P. miniata
(Bat star) 3.0
A. planci
(Crown-of-thorns) 1.0
L. pictus
(Painted urchin) 3.0
A. rubens
(Sugar star) 1.3
A. japonica
(Feather star) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus
(Purple sea urchin) 5.0
L. variegatus
(Green sea urchin) 3.0
P. miniata
(Bat star) 3.0
A. planci
(Crown-of-thorns) 1.0
L. pictus
(Painted urchin) 3.0
A. rubens
(Sugar star) 1.3
A. japonica
(Feather star) 1.0
JBrowse2 Tracks
Genes
Gene Search
Gene Search Tips
Gene Nomenclature Guidelines
Gene Name Questions
Expression
Search Anatomy Items
Quantitative Expression Datasets and Plotting Tools
Anatomy & Development
Search Diseases
Echinobase Anatomical Ontology (ECAO)
L. variegatus
Atlas of Development (pdf)
Resources
Protocols, Reagents and Data on EchinoWiki
Resource for Developmental Regulatory Genomics
Davidson Lab Gene Regulatory Networks
Libraries, Vectors and Screening
BAC Table
???header.navigation.echinobaseSearchAntibodies???
???header.navigation.searchMorpholinos???
Guide RNAs (gRNA)
Cis-Regulatory Elements (CREs)
Literature
Papers
Books
Cite Echinobase
Community
Find People
Find a Lab
Organizations
Job Postings
Downloads
Data Download
Gene Page Reports
Browse Download Site
BLAST Databases
???blast.header???
Download BLAST databases
???blast.alignment???
???blast.program.blastn???
???blast.program.blastp???
???blast.program.blastx???
???blast.program.tblastx???
???blast.program.tblastn???
???blast.database???
-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 3.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_030974746.1 PREDICTED: Strongylocentrotus purpuratus solute carrier organic anion transporter family member 4A1 (LOC582078), mRNA AAAATGTATATTGGCATTAGAATCTTCCGACGCGAGCGAAGATCGCTATACCGGGGTAAAGTCCAAGTTT AATAAGTCACCAATAAATGATGTATTCAATGTAGCTCGGTATACACCTAAACATCGTCATTCCGTATCAC TCATACGTAATTCGTACATGACATTCTAAATAGACGTATTATAAGCTGTGATTAAGACAAGGCGTGCAAT CGTGTGTGACTGCAGTATATATTGTGAGCCTCTTGCACATTGTGTTCTTTTAGAGGTGAATCAGCTAAAA AATTAACGAGAGCGTCATTTTGAGCAACATGGACAGACGGAGGACTGGTATTCTCGTATAAGGACTCAAT CCAGTGATTTATTCTTTGAAGTGCCTTCCAGGGTATTGTAGATCTTGGTGACCTCATCCCTCCCCTAAGT ACCAGACAAAACATTACTTTAGACAAGCAGTACTATTAGTCAACCCCAAGAACTATGGAGGGGTCATACA AAACACAAGAGGATGACAGAATACTGTTAAGACCGCCCTCTGCGGTTGGAACTCAAACCAACTTCAACGA TCCTCAGAGAGCAGCTGAACTCGAACTCGGAATCGACAACCCACTCGCCGTCGAGACTGAGACCTCGCTA CAGAACGGCGACGCCCACGAACAGAATGGAGGAGCGTCGAACGGAAAAACGAGAACGATGTCGAATGGCA ATGGTCACGCTGCTGAGCCAGATTCACTCCCGCCGAAGCCAAACGAAGTCGACGATGATGACGATAACCC GGAATGCGGATGGTTTAGGTGGAGGCCTAATTGCTTACAGTGCTGCAATAACATCGTCGGCTACACCCTC TTCCTCTCCATCTTCGTGATCGCTCAGGGTATGACAGTCAACGGTCTCGTCTACGTCGTCATCACCACGC TCGAACGCCGCTTCGGGTTCACCAGCGTCCGTAGTGGCTTCATCTCAAGCAGCTACGACTTCACCGTCAT GGTCATCATCATTTTCGTCACGTACTTCGGCGAGAAGGCGCACAAGCCCATCTGGTTAGGCATAGGGGCT GGCATATTTGGGATCGGTTCGATCATTTTTACGCTCCCGCATTTCCTGACGGGAGACTACGTTTATCAGA ACTCCGATTTTGAGTTGTGTGATAGCAACCGAACTGGGGACGATCTATGTACGACGACGGAAGTACAGGA CGAAAATCTGGTCAACTACTACGCCGTCTTCATTCTGGCTCAGGTGTTCCACGGTGTCGGAGCCTCGCCG CTGTACACGCTCGGCGTCACGTATATTGACGAGAATGTGTCATCGGCCGCATCGGGACTTTATATAGGTA TCTTCAAAGCTATGGCAATTCTTGGACCTGCAATAGGATACATAATGGGAGGAATATTCCTGGGTCTCTA CACTGATATCCAACACGCAGATGATCTTGACATCACCCCTGAAGACCCTACATGGGTTGGTGCTTGGTGG CTAGGTTTTATTGTAGTGGCTGCCATCTCGTTCTCTCTCGTCATACCATTTGTGGGATTCGGCAAGACGC TACCAGGCGGAAAGAAGATGTTCGCGCAACGTGAGGTTGAAACCCAGAAAGGGACGGAATTCGAAGCGAA GACGGGATGGCAAGCGGTTCTCCAATTTCCAAAAGCTTTGTGGATGCTAGTAAAAAACCTACCATTTATG TTCAACAATTTATCAACGGCCTGTGAAACATTTATACTGGTGGCCGTAGGTGTTTTCGGTCCTAAATACA TGGAGTCGCAGTTTAATATGACAGCTGGCGAGGCAGCCATCATTGCAGGCATCATCGTCACACCGTCAAG TTTTATAGGTGCCTTATTCGGTGGCTGGGTTGTCAAACATTATAATCTCAAGTACCGTGGCATGATGCGT TTTACATTAGTTGTTCTTATCATCAGCTTCGGTCTCCAATTCCTCTTCCTCATCAGCTGTGCAAACGTCG ACTTCGCCGGCGTGACCGTAAACTACGGACGCAACCCTGCGGACATCACGCCCGAGGAAGGCTCAAACAT CACAGCTATCTGTAACGATGATTGCAAGTGTACCAATAACTTCCAACCGCTGTGTGGTGAAGATGCTGTC ATGTATTACTCACCGTGCCACGCAGGGTGTACGGTCAAGAGCACCAATGAAGACTCACAATCAGTATATT CCGAGTGTGATTGTATACCACCTACGAACATGACTGCAGGGATCCTCGGCACTGGTGATGGTGGTCGCTG TGAACAGGGATGCTCCAAACAACTCACTTTCATCATCCTCACCTTCCTTCTCATTACTGTGGCGGCAATG ATAGCCGTTCCGCAGCTCACAGCAACTCTACGTTGTGTCTCGCAATCACAGAGAACGTTTGCCTTAGGAG TGCAATCGGTCATATACAGATGTTTAGGATCTGTGCCTGCACCAATCATCTTTGGATCCCTCATCGACCG AACGTGCCTGATCTGGGAGGATGAATGCGACGGGAGCAGGAACTGTTGGATGTATGACAACGTAGAGTTA TCTCGATACACCCTGATCATGTTGCAATCTGCTAAAGGTCTTTCCATCATCTTCATCATCCTGGCCCTCG TCACTTACCGTCCAGCTACCGAGAACCCCACCGAGTCTGCAGCGCCGAGCACCATCAGCAAGGATGTCAT GCCGCCCGAGATCCCTCGCGTCGAAGACATCGAGGATGAGAAGGTATAAGGGGAACGATGCTGGTGTAAC TCGAACGGCTGAGGGCGTCTTGCTTAGGGAGCGTTCGTTCTGCCGAGAGGTCGTTTCGCCGTATGAGCTC CTCACGCGTTTCTTTAAAGATCCTGTCATGCCTTGTCCATACAGTCGGATGCTGAGATTGTGGCGAGTTC ACGGCACAATATCCTTGGAGAACTTGGAAATATCTCGGGATAGTTCGGCTTGTTATTACTCGATGGCAGC GTGTCACCGATAGCTCGTGAAACATCGTGAAATTCTCAACATCCATCTCGGTATCCTCTCGGCAATAACT CGGCACAAACTCGGCACCGACTCGGCAATGTGTGATAGGGAAGCTTTAATCCGCGCGTAATGTATGTAGG AGCTCAAATACCAAAGAAAAAAAGAATCGATGGCATCAGCGAAACGACGGATTTTAACTCTAATGGTTTG TCTCTGGGGTCTTTGTTTGCTTGATTGATTCCTTGAGTGGTATCAAATGAGTAGGCCTAGTAAAAGTGAT CTCAGTGTTTTACTAGTGCAGTGATACAGGCCGAAAATTGTTCTGATCCAGAGACGAAACGCCGATGCTA TGCGGATCCAATATACTTTTACCAGTATTCATTAATAAGCCTATTTTTCCATTGTTTCAATGATTAGTCT CGTAAACTTTCGTACCAAAGGTACTAGGGAAAGTATCACAATTATATATATTTTCTCGGTTAGTTTTTCT ACGCTCAGAGCAAAAATTTAAATAGAATAGTATAAAAAGGACTAGCTAGTATATTGAGCGTTTGACGTTA TAGTATTGTTTGCGTTTCGTCTACATGTGCTGGCTTCCAAATGATCCGTTTGTATATAAGAGCATTATCC CTCCGTTATGATAAGAAAGTTATTATGTACATAATTCTTTTTAGTGAACAATTCCCAGCTTTGTTAAATT GTTACTTCTGCTATATCTATTATCTGAAAGGCAGTGGAACATTATTGTTTAAAAACGTTTGCCGCAAACG CTAAAGCAGGGTTTGAATGCCATGTATATCATTACTAGGGTAGAGAAATTGTTGTGAAAAATACGTCACA TCATGTTCCTCTGCCTTTAATTTATATTGTCGCCTTTGTTCATCAATATGAACATTTTATATTTCTTCAT CACATAAAATTAAACCGTATTCAAAGCTTATTATATTGTGAATTTTTTAAACTAAAGATATGTATATAGG ATGTCCGATAATATCAATTATCGTTTTTACTTGTATATTTATCTATTTTGTTGAAATTCAAAATAGAATG AAAGTAGGATATCATGTATTCAATCCGCATACAGTGGATGATGTGTGCTTTCAGACATAATTAGAATGTC TTTATTTACACATTAAAGTTGTACTAGACTTAAACATTCCAGTATTATCGTCCACCGTCTCTCAGTGTGC CCCAAACCGAGGGAGTTTAAATCAGAATGGACAAATATATAGGCACTGATATTGTATTGCAGATATACAG TGGTCATGAAATGGACATATTTCACTTATTTTGTTTTGGATTCAGGGATTCGGCCTTTAAAGGTCTATTA TCTAATTGCAGTATCTTCCAATATGCTTCATTTATTCATCCCTGTGTCAACACCTTACCTTATTCAACAT TCAAGTGAGTGGTAGCAGAATTCAATGAATGAATTTGATTTGGTGATTCGAAAATATGAAGGGAAAACCA TCTTATAGGCACTAGATATCGTAGATTACTTGAACTGCAATTAGAAATTTTGTCCATCTAATCTTTCAGG CATATACATTCTCATATCATTAGTATACACATACACACACGCAAACACACGTATCATCACGTATTCCCTT TCAGGTAAAACTCATTCAACCATCATTCACCATTTTCAGAATGGACTAATTGGATAGAAACAAATTTAAA CATAAAAAAAAGAAAAAAAATCGTACAGAAAACTATCGGCACCAGTCTTAAAATCGTCAGTCATAATTAC ATTTCGTTTTCCCCCGAAGTTTTGAAGAGTATTGTCCCCAACAAAATGACACAATTCTAGCGAATCTTAT TTTTTAAAATGGTAAAGAAATTGTGCCATATCAGCACGCTTTCTATCATTGTGTTGCAGCAGCAGCCCGA TTTGAACTACGCCCTCTCCGCTCCAGATACGCTGGATGTGGCACTCAGCTGGATCATAGGCCGTCCAGAG GCTTGCGAGTACGGCAGGCGTCCGGTCTACATGACTTGACCCGTTGACTGCCACCGGCTTTCGTGCTTGT GCCTTGTCGGCCATTTTGGCGGTCGAAACTCAGGGTTATACTGGTTAATGGAGGCGTATGGAGGTGCTAT ATAATCCAATGCCAGTAGAAGAGTGCTGCATAACTATAAAGCCTGTTTAATAATCTCAATACAGGTATCA GACATCTGTTATTTTAAAGTATCCTCATTTTACAGTAAGGGAGACAGCCGTATTTGGAGGACAATATAAT GTCCTCCGTTAACGAGAGAAAAAAAATCCGCATCAGTGAGCACGCATGATCTCTCATCTGCGCTGTTCAT TCTGTCGCTGCAGAGACACTCTAAAAGAGCCTTTGCTAATTTGACTTTGAAATATTTTGAAAGATGTAGA ACACATTCCTATGCTATGTTAACCCCGAAAGTATGTGACCATACACTGCACTATCTGTAAAAAACTAAGA GTTTTATGGCAGTGCAGATTTCAAAAAAATATAAGATTTTATGAAGATATATGTATCAAGTCTCGCAAGT CAAAACCATATGATTTCTACGCATCTACAGATCAAGCACATCGGGTTCACACGTGTGCTCTCTGATGCAG AACTTGTCTTGTTAACAGAGGACAACAATCGTCCTTCAAAATAGACCGTTTCACTGACTGTTTATCAAAG AAGATACTGCATTCATCCCAGATATTCCATGCTGAAAGCTTGATAACTTTTGAAGATTGTGCCATGATAA AATGCATTTGCAGGGAAGGAAAAATTATCGCTTCGGAGACAATGCTGCGTCAACTCTATACTCCAAATCA TGCTCTCTTGAAATCATTGCGTTTAATGATCTCAACTAAACAATTATTTCATTTTCACAAAACTATATTC TGTAATCATGCATTTGTAATATTTTATTCAAAAAGAATGGGTGCTGAATATGGATTGTATATAACTGAAT AATACTGTCACTCGTGTAATTATTCATTCATTCAATATTTACTCGCACATATATTTTGGATGATAATCTC CCTTGGAAATTAATACCTCATACGATGAGGTCATTTAAAAACAATTGTTATTCAGGGAGAAAAACATAAT GTTCTGTTTATACATGTAAATCACTCACTTTACAACTCTTCTTTGATCTGAATCTATGTAGTAATTGTAA AAAATAAAGCATACTTTAACTTCAAATATTCACATATGACTATATTCTGGTTCCAAATTCATTTCAAACA GCTAGTCACGAACCAGTGACAGTAGTCAGATGTGTGTTTCATCCAATTTCATAATCACAATTGATAATCA CTTTTCACAAACGCATGTACACTGTGATGGGTGTGTGATATCTATTAAATAACTGCCTTCATATCATATG ACCTTGCATGCATTATTGAGTGTATGAAAATGAAAGGAAATGAAAATATATTCATCTTCTCATCCTTTGA TTATGTATTCATTTCCACAAAAAGCACATAATGCTCTTTATATCTACCCTTACATTGCAATATAGTAAAT ACAAATTGATTATAAACGAATTGTTACGATTATTACTCAGCTATCATACTGTACGTGTGTGTTGAACAGT TGTATAGATAGTTATGATAATGAGCGAAAGCTATTTTTCATGAAAAGGTTTCGTTCAAGAATTCAATATT TTTCCTATACTTGGAAGTCTTTCAAAATTGAAAATCATAGCAATTGTATAATGCTGTAAATCTTTGTGCT CTCTTTTAATAAGGTGCTGCCACTGATATTTGCTCCCGCAGTTTATTGCAACAGTGTGTATTATGAAAGA GATACATGTAATCGTCTCATTTACCAAAGAGTATATTGTATTGTTTGAGATAACGTGTATTTTATGCTAC TTTTTACCAAAGCTTATGTAAGATAAATTGTATTTCTACTTTCTCCTTCATTTTATCATCATTGTACAAT TAATTGCCTTTGAAACCAGTTTCGCTGCCTCAGGGTAGTAATGTACATGTAATGGGAAGTCGATCGTAAT TT
???blast.query.upload???
???blast.options???
???blast.eval???
???blast.eval.01???
???blast.eval.10???
???blast.eval.1???
???blast.eval.001???
???blast.eval.minus5???
???blast.eval.minus25???
???blast.eval.minus50???
???blast.eval.minus100???
???blast.numalign???
???blast.numalign.25???
???blast.numalign.1???
???blast.numalign.5???
???blast.numalign.50???
???blast.numalign.100???
???blast.wordsize???
???blast.wordsize.default???
???blast.wordsize.2???
???blast.wordsize.3???
???blast.wordsize.4???
???blast.wordsize.5???
???blast.wordsize.6???
???blast.wordsize.7???
???blast.wordsize.8???
???blast.wordsize.9???
???blast.wordsize.10???
???blast.wordsize.11???
???blast.wordsize.12???
???blast.wordsize.13???
???blast.wordsize.14???
???blast.wordsize.15???
???blast.wordsize.default.message???
???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
???blast.filtering???
???blast.on???
???blast.off???
BLAST time is limited to 30 seconds