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Echinobase
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Echinobase Accession
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Echinoderm mRNA
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S. purpuratus
(Purple sea urchin) 5.0
L. variegatus
(Green sea urchin) 3.0
P. miniata
(Bat star) 3.0
A. planci
(Crown-of-thorns) 1.0
L. pictus
(Painted urchin) 3.0
A. rubens
(Sugar star) 1.3
A. japonica
(Feather star) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus
(Purple sea urchin) 5.0
L. variegatus
(Green sea urchin) 3.0
P. miniata
(Bat star) 3.0
A. planci
(Crown-of-thorns) 1.0
L. pictus
(Painted urchin) 3.0
A. rubens
(Sugar star) 1.3
A. japonica
(Feather star) 1.0
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BLAST Databases
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Download BLAST databases
???blast.alignment???
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 3.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>JT106311.1 TSA: Strongylocentrotus purpuratus WHL22.620033.1 mRNA sequence AAAAATCGGTATTTTTTATCATCATGAGTATTATTATAAGCAAGACACATTCACATGATAAAGATGTACT TAACTGCTATCAACAAAGTTAAAGTAGCTATTCTCTGCATCCTCTATATCTAGCCTCCCAGTCCCAGGTC CGTGGTCCCGTCGCTAGCTGAGAGGGACGAGAACCCGAACAACGAAAAACACGACGAGGGACACGACGAG GACGACGATGGCGAGGAGCATAACGATGACGAGAACATTGTTGATATCTTGCTCGCGGCAGGTGCCGACG CGAGCGCCACAGATACGAAGGGGACGACGCCGCTTCATCTCGCCTCCATGCACGCCAACATGGATGCCTT CAAGCGACTCCAAACCGCACCTGGAGTTGATATCAATGCCCAGGACAGACGAGGTGCGACACCGCTCCTC ATAGCCTGCAAAGCTGGTAACACGGATGGCGCTTTGGTCCTCATCGACAAAGGGGCAGATATTCTCATCT CTGATATAAATGGAGATACACCCCTTCATCTAGCAGTAAGGCATTCACACACTCTGATCGTCACATCATT GATAGAAATGGCGGAGAGCAAAGGGGACATCAACGAGGTAATGCTGAACGAGAATTCCCGAGGTGTGATC CCTCTATACGATGCGGTGAAGTGTGGGCACAGGGATCTCTTCCAAGTCTGTCTCGACCATGTTTCCAAGC GAACGAGCGAGGTGGACATGATGAAGCTGATGAACTTCGCCGGTCGAGACAACGACGACGCTGTCCTTCA CGTAGCCGCTGCGGCCGGGTATCAGGACATCGTCGAGGCTCTCATCGCCAACGGAGCCGTGGTCAACCTG GTCAACTTTGACGGGCAGACCCCGCTGCACCTGGCATGCGAAAAGAACCACGAGAGTATCGCACTGTGCC TCGTTGAAAATGGAGCTGCAATCGTCGCAGATAGCGCTGACTTGAACCCTTTACAGGTTGCTGTGAACAA CGGAAGCTTCGAAACCTTGATGTCGCTACTGCAGTACATCTCAGCTGCTTCGGGTGGCCAATCTGACGAG GCTACACATATCCTTCAATGGTCGGCTGCAAACAACAAAGCGGATATACTCAGAAAGATCCTAGATTATG AGTTTCGTTTCCATGAGATGACTGATGATGGGATAATGGACTTCATCATGGATGCCGTCAAGATGAAGCA TAAAGAGACGGTTCATGTATTAGTTCGCTGGAACAGGGCTGTTGTGGATCATCGAGACAAGCTCGGAAAC ACACCCCTTCATCACGCCGCTGAGGGCGGGCATCAAGATATCGCGCAGGAACTGATTCAAGCCAAGGCCC AAGTTAATGCCACGAATGGTGAAGATCTCGGTGGCCTATCACCTCTCCATTACGTAGCTGACCGTGGATG GACTAGAACAGCCCGTGTTTTACTTGATGCACAAGCAGATATTGAGCAGACGGACAGCCAATTGATGACA CCCCTTCACCATGCATGTAAAGAAGGTAATGCGAGCATGGTAGATCTACTGCTCTATGGCAAGGGAGCTG GCGATGTCTTCAAACCTGCTGACGTCACAGTACAGGACGCCAAGGGACTGAACTGCCTCGATCACGCAAT CGACAACGGACGCGAGACGATCGCTAGGATGATCATAACACATAACAGATGGTTAGAAGTGATGTCGGTA TCGAGTCTGGATGAGGAGACTAGCTACCGCACAACGCCGATGCGAAAACTCATTCGCTCTATGCCAGACG TAGCCAAAATGATACTGGACCGGTGTATAACCGTTACGGGCGGAACAAGTATTCGGGATAAAGACGTCCG TGTGGAATTCTACTACGAGCTCTTAGAAGACGCGTTCTCACCCTGGATGAAACCGACAGATGAAGATTTA CCCCCTCACGAGGGAGTAATAAACACTTTCTTGAATCGGATGTACAGGAGGGTGTCGACTCGACTACCGT CCGACATCGACCACCAGTACGATAAGCAAGATCGCTTGTTCAAATCAGCTCAACCTTTCATCGCGGACTG CCAGGAGAGAAATGAAAACCATCCTTTGAAACTGATGGTTTCTTCCAAACGTGTCGATCTACTGGACCAC CCACTCGTGACGACTTTCATCCAGCACAAATGGAACTCCATCGGTCGCTACATCTTCTACGTGGGTTTCT TCGTCTACATCACGTTCCTTGCGATGCTGACCGGATACATCATCGTGATTCCGCCGAATTACTATGTACG TGCAGTCAACAAAACCACCAATCCACCCACCATTACGTGGTTTGCAAGCGGGGAAGTACGATGGGTGAAG TCCGTGCCAGATGCGGTCCTGGTCTTATTCGACGTCGTTGGACCTACCGCGATCATGATATTGTCCCTTT TGAACATTTTAAGAGAGTTTACTCAGATGTTCGTTCAGCGGATATCTTATTTTCAGGACTTCGGAAATAT CATGGAATTGTTCCTCTATCTCTTCGCCATCATATTTTCTCTGCCTTTCAGCACGGTTGAATACGTGAAG CACGGTAATATCAAACAGGACTGGCAATGGCCGATTGGCGCTGCAGCTGGCTTCTTAGGCTGGATCAACC TGCTGCTGTTTATCAGGAGTAATTCGAAGCTTGGCATCTATGTCATCATGTTTATAGACATCTTCAAGAC TTTCCTTCGATTCAGTTTAATCCTGTTCTTATTCGTCATGGCGTTTGGTTTGGCATTCTACGCACTTCTC ATGAATCAGAATCCATTTCACTCTCTGTTCGATTCCCTGGCCAAGACGTTTGTAATGATGATCGGTGAGC TGGATTATGCTGATATCTTCTTCGCTCAAGATTACCTAGGGACATCCAATACTCTCGAGGCAGATGGAGA GGCAGCCTATTTTATGAATTCATCTTTCTATGGAACGATCACTCAACTCTTCTTCATCCTCTTCCTCATC GTTATGTCCATTCTCATGATGAATATGCTGGTTGGTTTAGCTGTAGATGATATCCAGGCAATCCAAGAAA AGGCCAATCTTCATCGTCTTACTATGCAGGCGAACATGGTGTTGGAGAATCAGTCAAAATTCTCTCTGTG GATATGGAGAAGGTCTATCGTTCGAAGGAAGAAGTTCCTATCGTCGAACGAGATTAAACTCAAGAAATGG CTTCGACGGCTGACGGGTGGCAGAAAGCAACTCAAGAGGGCGCTGTTGATCAGCACTGATGCAGAGAATC CTCTTAGCATCGACTCACATCAAGATGAACCCTACGAGAAGATCCGAGAACGTATGAAGGACGTTAGCCT GAAGGTCGGACGAGCAACCATTGAAATGCTCGAAGAAGCCAAGAAAAGAGACACCCAGTTGAACAACATA CGTGAAGCTCAGGGTAGCCTCTACGACCGTACCGACCGTCTACAGGCAGCGCAAGAATTCCTTGGAGATC GGATGGAGATAATGCATCGGAAGCTGGATGTCATGATGAAGAAAATGAAGATCAAGGAGAAGAAGATCGA GGGTGTCTTCTGAGGTGACGTGTCAGGGATCCCACATTTGCTCCAGCAATGATTATATATATGTATGTTT TAAGTTTCAATACAATACGTTATGTACACTGTTGGTCATAATGGTGGAATAATTTTTTTTACCCCAATTT ATGGAATGATTTTGACAATGATTTATTCCTAATAGATATAGATAATAGTATACATTCTCAGATTTTATTG AAAATAATAATTTGTGAGTAATTTTCGACTGCTAAAGCATGTGTGTGCAACTATGCTAATCAACTAGGGG ACCTACGTCCTTAAATAACTGACAGTAATGAGGATTACATATTATGTATATAATGAGGCACATATTACCA ATTTGGTGGTCATCTATGAGGCCCTGTTTGGTAAGAATAAAACAGATAACAGCAGCAAAAACAAAAGAGA TAAATACACAAGTAGATAAACAGGTAAAATCAGATGACCAGATGGTCCCTAATAATGTCATGGATTTCCA CTTCGGTACATATTTTATTAGAGGTGTCGTGGCCGAGTGGTTTCAGCACTTAAATGCAAAAGTTATGGGT TCGATTCCCGACACGGCAATAATGTCCTCTGTCAAGGCATTAATCAACATTTTCACTTCTTACACAGGAG AGAAATGGGGACCTGGTAGGACCTGAGTCAAAGCGCCCTTCACGGTGACCATATTGCCGTGTCGGGAGTG TAAACGGTTAACATTGTGTGTGAATGAATCCGATGATCAGGGTAATAATAATATTATATAATATATGTAA AGCACTTAGAGACAGTATTTCTCACAAAGCGCTATACAAATCCAAATTATTTTGATTATTATTATTACAT CTTGGAGAACATGCAAGTGATAGACTGTACTGTACGTTGAGGTTCCAACGGGTTTTTGGTCAGGATTAGT TTTAGGAATAGTCTCTCGTCACGGGTTGAAGTTTGCCTATTGCAGAAACTTAGACAGCTAGACATTAGTC ACCAGAGAATGTGTTTGTTGTAGTTCGCGTGCACTGTATGATCACGCCAGTAGCAAGATATTCCTTTCAA TATTGTTTGTTGACATAAATAGCAGATCTCTTATTTTGCTGTAATACTCATTTTGAAGGCCGTGGAGTCC AGACAATGATCTACCCGCGTGCAGTGTTTGCCATGAAGGCGTTGGGTAAATACACCATGTGTGCAGTATT ACTCAGACATGTTATTTGTTAATGTGACAGGTAGTATAACGCGAAGGGAAATATACAGAAAGGGAGAGAG AAGGGAGAGAGAAGAGAGAGGGGGCTGGTTATGCATGGAATTTTACCTGTATAGATAAACACAAAATAAT AACAAAGACCATAATATAACCTGGTCATTATCTACCAAAGAGAGTCAACGGAAAAACAAATGTAAACTGA TGAAAGGATTCACAGCTTTTCAAAATGTGTCCAAGAAAATTTGTATAAACGTTGAATTATAACCATGCAT TTTCTAGCAATGCTGAGTTATTATGTGTTACGAATCTCCATGTAAATTTCTATTTGTTTTGAAGCAAATT GCTTAGTGAATTTAGGGATGGTGTTGCCGTCAGTGGTTGCGCCATAATTGATGCTACTTACAATGGTTGC GCCATTATTTATGGTACCTGCAATGGTTGCGCTATTATTGATTGTACATGCAATGGTTGCGCTGTTATTG ATGGTACTTACAATGATTGCGCTATTATTGATGGTGTTTATTTATTACGGTGATGCCGTCATCCATGGTA AGTGACCATACGCTATTGGACTGACCATCGTTGACGGCCTTGAGTGGAGGTGTTGTGTCGAATGGTGGTG GTGGTGGTGGTGGTGGTGGTGATGTTATTGTTTTTATGGTTGTTACGGGGAATGGGCTACTATAATGTGG TGGTGATATTGGCACCGTGGCACATGGCAAGTACATGTCCTTGTTTTCACGAAGTGACGGTAGTGAGGAA AATCGTAATGCAAAGTGAATGCAATTTTTTTTCACTACCGTCACTTCGTGAAAACAGCCACGTCACATAA GTCATTTCTTCTTTAAACGTTCATGTTGGTTCAATATAGGATTTTTATTTTTAAAAAGGCATGTTCATGA GAGAACATAACGAATCATACTCTATGACACTCTATTTGTGTTACTGCCTATCGCAGTACTCACCTGAGTT TATCACTGTCAGGTAAATAAAGATTATGAATTGCACAGAGTATTACTTGTTTTTAGGTATTAAAGTCTAA TAATACAAGATTTCGTGATTTTATGTTTGCCATGTTACTTTGTCTTGTTTTCTTTTCAGTGATATCGATT CAAAACGTAATTTGGACACATTCATATATTTTGGTACTATATATTACATTGTATGTGTATTAAGGTACTT TAGCGAATGAACTGCATCCATAAGTCTTCCTAATATACTATAGAATATTTGAGATTATATAGCGACTATG TAAACTATATGTTGTGCATTAATTTGTTTCCTTTCATGGGACACTGTGTCATTAATATATTTCTTTTATA ACTGTAATAGATAAATGTATAGTTCCGGTTTTGTTTTGTGTTTCTTTAGTATTATCGCATCAATATATAG GCCTATCTGTGAAAATATTATTCAAAATGTTTTTGCTTTTCTTGGTTCAATATACATTGTAATTTATCAA GTACATGTGATTTTACCGCCGACTATTTGTTTAATCGTGTTCACGTATTTGAACTTTGATTTGATAAAAG GCTGACTCATTTAAAATCTGCTAAAAACTCTATTGAAATGTACATTTGAATTGAAATATATTTTTTGATA ATAATTTCAATCTGTTATCAATATTTCTATTTTGTCACTTTTACATTAAAAATATAGCACCCTTAGTCCT TGGACTACAGCATTGTTACCAGCACAAGTCATAATAAATCTAAATAAATATTTTGCTACAAAATTTGGCA TGTACAGGACATATTTATTTTTTTTATTTGTTGAAAGTAATGCATAAGATGGGATCCATACTTATGTACA TGGTGTTAATATTTTTTTCTTCATTTCTTGTCGGTGGAGATTTCTTCTGAGCAATTTAGTTTATCTCCCA GATGCATTCATTATTCATCATGTTTATCTCTACTTCAATGAGGTCTCATGACTCTTACACGGTACGTCAA AGACCGAACAAGTCACTGACGCAGTCATGCGTCAATACATTGGTGTCTCGGTTGCATTAATCTTTACACG GTCATTCGTTGGCTGTACTTTTTGACATCTCCCTGCTAACTTTTTGAGTGTTTGCATTAAGCTTCAGAAA TAGGAAATGGGGACGGGGGCGGGAAAGGCGGATGACATACAATACATATTTGTCAAGTAGCGGGGGGTTC TAACTCAACATGATGACCTATAGACGACATTATATGTGTTTTCCTGTGCATAGCTAACTATAATTCTTTT TTAGTTGAAATACTAAAGATTCGAAAACATCTCCATATCTCCCCAAACTTTTCAATTACAACCGTGAAAG AACGGATTTCTTGGTTGACTACTTCTCATTCGATAGCAAACTTTGGTGACAAGTCACGAAAAAAAAACGA GAGAGAAAGAGACAAAATGAACATAAAGGATGATTTGCCCTGTATTCAAGCAAAAGTGAATAGGGTCTTT CAGAGTTCAGTAACACACTAATGCTGTTTGTGCCGCGGAATTTATCATTATTCATCATTTTTGTATGGGA GGCGAATTCTTTGCTTGTTCTCGTGCAAGCTGTTTTGACGAAAAAAACTGAAAAGCATTTTTGCACACCA CCATAGTTGGCTGGATAATAATTATGACACGAAATAAGTCGAATCATCACATTCTTTATGTTTACCCAAG GTTGTTTACTAATCAAAACATTACAGACTATGCATGGCGACTGTTATTAAACGAATAAGATATTTGGAAT ACAAAAT
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???blast.eval???
???blast.eval.01???
???blast.eval.10???
???blast.eval.1???
???blast.eval.001???
???blast.eval.minus5???
???blast.eval.minus25???
???blast.eval.minus50???
???blast.eval.minus100???
???blast.numalign???
???blast.numalign.25???
???blast.numalign.1???
???blast.numalign.5???
???blast.numalign.50???
???blast.numalign.100???
???blast.wordsize???
???blast.wordsize.default???
???blast.wordsize.2???
???blast.wordsize.3???
???blast.wordsize.4???
???blast.wordsize.5???
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???blast.wordsize.7???
???blast.wordsize.8???
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???blast.wordsize.10???
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???blast.wordsize.12???
???blast.wordsize.13???
???blast.wordsize.14???
???blast.wordsize.15???
???blast.wordsize.default.message???
???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
???blast.filtering???
???blast.on???
???blast.off???
BLAST time is limited to 30 seconds