Click here to close
Hello! We notice that you are using Internet Explorer, which is not supported by Echinobase and may cause the site to display incorrectly. We suggest using a current version of
Chrome
,
FireFox
, or
Safari
.
Echinobase
???banner.login???
???banner.register???
Contact Us
Cite Echinobase
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
BLAST
Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus
(Purple sea urchin) 5.0
L. variegatus
(Green sea urchin) 3.0
P. miniata
(Bat star) 3.0
A. planci
(Crown-of-thorns) 1.0
L. pictus
(Painted urchin) 3.0
A. rubens
(Sugar star) 1.3
A. japonica
(Feather star) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus
(Purple sea urchin) 5.0
L. variegatus
(Green sea urchin) 3.0
P. miniata
(Bat star) 3.0
A. planci
(Crown-of-thorns) 1.0
L. pictus
(Painted urchin) 3.0
A. rubens
(Sugar star) 1.3
A. japonica
(Feather star) 1.0
JBrowse2 Tracks
Genes
Gene Search
Gene Search Tips
Gene Nomenclature Guidelines
Gene Name Questions
Expression
Search Anatomy Items
Quantitative Expression Datasets and Plotting Tools
Anatomy & Development
Search Diseases
Echinoderm Anatomy and Development Ontology (ECAO)
L. variegatus
Atlas of Development (pdf)
Resources
Protocols, Reagents and Data on EchinoWiki
Resource for Developmental Regulatory Genomics
Davidson Lab Gene Regulatory Networks
Libraries, Vectors and Screening
BAC Table
???header.navigation.echinobaseSearchAntibodies???
???header.navigation.searchMorpholinos???
Guide RNAs (gRNA)
Cis-Regulatory Elements (CREs)
Literature
Papers
Books
Cite Echinobase
Community
Find People
Find a Lab
Organizations
Job Postings
Downloads
Data Download
Gene Page Reports
Browse Download Site
BLAST Databases
???blast.header???
Download BLAST databases
???blast.alignment???
???blast.program.blastn???
???blast.program.blastp???
???blast.program.blastx???
???blast.program.tblastx???
???blast.program.tblastn???
???blast.database???
-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 3.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_041629068.1 PREDICTED: Lytechinus variegatus serine/threonine-protein kinase 31-like (LOC121431548), mRNA ACACTCGTGGCGCTGGCCTCGAATATTATATTGCGCACGTGTTTACAAACATCAATTTCCAAAAAGTGAC AGTCTTCGTATGCTCTGCTAGTACTAGTACAGGAATCCACACGTCCAACGCCCGCAGCTGCCCCGCCGCC GCGGCCCATGCCCAGCCCGCCCGGTACATACATGTAGGTCGCTGTCGCGTCCATTGATTGTTAAACTCAC GTGTGATTTGGACGAAAGAGAATAGGACTAGTTTTACATTTTCTGCAAACCCCTTCGGCCCTTGTCATGT CCAACAAAGGTAGCATATACGTGGGAAATCTCCCAAAGACGTTTACTGAGAATGATTTCCGTCAGCTTTT TGTCGAGATGGGACCAATCGCATCGGCTGTCTTGAAAGATGGCAAGCCCAAAGATGGAACACAAATGTTC AAATACGGGTTTGTAAATTTTGAAGATAACTCTTCTGTTGAGATGGCTATAAACACTTGCCAAGGTAAAG TGGTGCAAGGAAGAGTCCTCACTGTACGGAGATCAGAGAAGAATAGAAAAGCTTTACTTGCAACTCCTGG ACGTCCAGATCCAAATTGGAAGGAAGGGTCCCATCAGTACAACAAAGGACCAGATGAGGTTAAGAAGCTC CAAGGATATGAGGAGAAGGTTAGTATCACCCATGTTGTGGATCCACACACCATCTATGTCCAGGCAGTCA ACAGGGAAAACCTGGAGAAGTTCTCTATCATCATGTCAAAGCTCCAGGACCACTGCAATTCTGCACCAAA AGTCCATGAACTCCACCCTGACAGTAACAAGATCTACGGAGCAATCTTTCAGGACGATGGAGCTTGGTAC CGATGCAGAGTGACAGGACATACACACAACATGGCTCAGGTGATCTACATAGACTATGGTAACGGTGCCG AGGTGGAAATCAACTCGATGGCAGAGCTCTCGGACGAGCTTGCAAACATCAGTCCTATTGCTCAGAAGAT CAAGATTATTGGTGTAGCTCCCTCGTTGAAAGACTCCTCATCAGATGCGGCTAAGCAGGCTTATGCATTC ATCGAGAGCCTGGAGGCCGCAGGTGGAGAGAACCAGAGTTTGAAGATCATCATCGCTGATGGTGTCACTC CCCAGGAAGATGGCTCCCTGCCAGTGCAGCTGTTCCAGAACAATGTCAACGTGGCACAGACTGTAAACAA GAAATTCGCTCCAGGGTACCAGGAGAAGGTCACCCATGCAGCCTCCAAGCCGCTCCTCAGCACTCCCCAT TCGATGCCGGGTGGAGCAGGCGGAGCTGGGATCCAGCGAAAGAACATGGAGTTTCAAGGAGGTGGAGACG TGAATGGTATTAATGGGCACAAGCCACACCATAACCACAGCAAGGAGATGAGTGACCTGATGAAGAGGGT GCAGAACTTGGAAAGTGTCTTGGAACAGCTTAAAGATGATAAATTCATCCTTCAGAGTCAACTCCTGAAT TACAAGAGTGAAGCCGAGAAGAAGAAAGAGGAAGAATCCAACAAGATGAAAAATATTCTGCGAACCCATC TTACCCCTTTGACTGAGAGCTTCCAGAGAATCAAAGAAGCAAGGATACGTTTCTCAGTTGACCCTGAAGT GAAGAACACTATCCAGCAGGCCATCGATCTTGCAACCAAGAGACTCCATCCCTTCATGGAGGGTAGTCCG TCCAAGGAGAAGGGCGACCTCATCAGTCTTATCCCGGACTCAGAACCAGTCGGTCTCAAGTTACAGGAAC TAGAAAACATGCAGCAGGTCCTACAGAATCTGGAGTCCAAGGATGAATTGGGGGATGCGATGCTGAAGCG AAATGATGCCCGACATGAGGCCTACAAAGCACTCACCAATTTCATGGATGACGTCAAGAAATTGCCGATT GCCAAGAGACTCCAAGATATTGAGGATATGGTAAATCAGTTGGAATTGGAGTACAGTTCCTATCTAGACC CTACCAAAGTGATGCAGCCAGATCATCATGTAGCAGACATGGAATGCTTTGATGAATACCAAGCATGGCT GGAAGAAAGATGCGCCAAGATTACTCCTCTACGAGACGTGACCAATGTACTGAGGGCTAAGTGGTGTGAG TTACTCACTGACATGAATAAGTCGTTCCTGTTTGATGGCATCAGCTCCCCTTCTTTGGAATCTTCTGATA AGCTAAGGGAGGATTTTGAGGTTGCCATGGAAATGGAATTAACGTTCACTCTCCATGGTTACACGCCATC AGTTGATCTTGCTGACAGCACAGCATTGAAGACTAAACAGGAGCAAGATGTGAGAGAGGTGGAGGTGATC TCCTCCACGGTGCACGCCTTGGTGAAGGCACTCGTCAAGGAGAAACAGACGCTGGCCAGTCTGGCCCAGG TGTGTGAGAACTTTGCTTCGATGTCCAGTCAGCTGAATCCGTGGTTGAACAACAAGCCCGACGTATCCGG TCTGCAGAGCCTCATGAAGGAGGTTAAAGCACTCCGGTCGAGACTGAGGCACAAACTCGCTGATAAGAGA GACTTGGAAGAGGATACAGAGCAGTATGAGGCGAGTCAAATGGAAGAACTCAAGGTTGAGATCAACACTA TTCAGGAGAAGCTTTGGACATTGTATCAGAAAGAAGATTCATTACTGAGGGAATTATCTGAGCTGACTGC GAATCATTTCCCTGAACTACCATATCTCTACCCTGCTCTTGGTATCACCAAATTCTTGGATACCAACGGG CTAGTCAAGGATGGTCGTGACCTCACACACCTTGAGCTTACACCAGTGCCCGGCTGTAAGAAGACGACTG TCAAGCTTGCTAAGGTCAATGGAAAACCTGTCAGCATCATCAAGGTAATTCATCTACCCGATAAGCATAC TCTGGATAAGATGATAGCCTACTCGGTGATCGACATCCCGTCTTGTATGAGACTCCATGCAGTGTATCCT GAGAAAGACGGTTCTCAGCTCTCACTTCAGTTACCGTACATGGGACTAGGGAACATCGAGACTGCCGTCA AAGAAGACGGGCTGCTTAGTAAGATGGCTGTCATCAGTGTCTGCAGGGATATTTTAATGGCCCTCGAGGG GCTTCACAGACTAGGTCTGGTTCATGGAGGTATACACCCGAGGAATGTTCTCTTAGAACAAAGGGTAGAC AGCAAGGAGGAAGAGCCTCAAATCACTGCACACCTTGCTGAGTTCGACTTCACCAGAACCACTAGTGAGA CGGCTTTGAAGGGCTTCACCACCGAGACTGGGATATGCTTCACAGCACCGGAGGTCAACTGCGGCCTTCA AGCAACATCACAGGCCGACATCTTCGCTTGCGGTCTCCTCCTCCTCTGGGCGCTCTACCCGACCAGAGTC TTCAAAGTCGAAGCAGACGGCACACCCGACCTGCACGGCTGCGACCTTCCAGCCTCCCTGACGGAGATTC TGGATGCCATGCTGAACTACAGCCCCTCCAAGCGGCCCTCCGCCACCCGCGTCATGGAGTCCTCGTTCTT CGCCAGCCCTCCCGACTTTGCCGAGAAGCCGTCGGCGACGATGACGATAGTGGTCAATGAGGGCAACTCT ACCCTCGAGGAGAGTTCGCTGAGTGATATCCCAGAGGGTGAGGACAACCAGAGAGACATCAGTACCACGG TTGATCCTCAGACGGAACAATCACAGCAGACATCATCGCCTGGAGGTACTAAGAGATCGATGAAGACGCC ACCAGTTTCTCCCCTCAAGAAAGCCATGACTGAGAAGCAATCTCCTGGACAGATGCTCCAGGACTCCCCT CCAAAGGTCCAGGATGATGTCGTCAGCGGCCAAGGAGAAGAGACGGCAACAGAGAAAATAGAATCCGTGG TCCAGGAATTCAGCCAGGTCACCTTGGTAACAGATCACAAGGTTAACACAGAAGACACTGGAGAGGCTTC AGACTGTGATAGTGAGCCCCCTCCTTTGGAAGATGATGAGGTCGTCGTACCAACCCTAGTAGAAGGCTCC CGACACTCAAAAGAATCGGCAGAAGCAGGCAGTACTGATGCTGATGATAATAGCTCCCCAGTCTGAGGGA GGGATGATGCGTCATTCAATCACAGCTTTTTAACTCTGTGCAGACAAATCATGGCAGTATTATGATTTTT GTTTTGTAACACTATATCGTCCTTTTTGAAGAGATACGGTCTTATTTTCAATAGTTCTCCTATGTCTTGT TCAAGAAAGAATAGTCATGTTCTACAGAGTCGAGGAAGAGCTCATGGGCTGTTTTCTCTCTTATTTTGTT ATCATGAAAAGACGTTTTCTTTATTTCTAACATTCGCAGAGTGCATTTAAATCAAATATTATATCATTAA AAATGTTAGCTTAAAATGTATTAAGTAATTTGGGTTACATTAGATCTATGTCTCTTGAGATTAATTGATG CTAATTCTTTTCATCACAAAACTCAACATATATGCGAAAAGTGCTAAGAAGTCGTAGTAAGTTCACTTTA ATCGCAAGTCTGTGCCTTAGTTAATTATGAGCAGCTCAAACTCGATACGCCTCTGAAAAGTACTTGGAAT TAATCAGTCTAAGTTAAGTTTTAATCTCAAGTCTTTGTCTTAGTTATAAGCAGCTGATCAGCACAGTATT TTGTAAGTTTCAAACAGTGTTTTGTATGTTTCAAAGAGTATTTTGTATGTTTCAAACAGTAGTTTGTATG TTTCAAACAGTAGTTTGTAAGTTTCAAACCTTGCCAA
???blast.query.upload???
???blast.options???
???blast.eval???
???blast.eval.01???
???blast.eval.10???
???blast.eval.1???
???blast.eval.001???
???blast.eval.minus5???
???blast.eval.minus25???
???blast.eval.minus50???
???blast.eval.minus100???
???blast.numalign???
???blast.numalign.25???
???blast.numalign.1???
???blast.numalign.5???
???blast.numalign.50???
???blast.numalign.100???
???blast.wordsize???
???blast.wordsize.default???
???blast.wordsize.2???
???blast.wordsize.3???
???blast.wordsize.4???
???blast.wordsize.5???
???blast.wordsize.6???
???blast.wordsize.7???
???blast.wordsize.8???
???blast.wordsize.9???
???blast.wordsize.10???
???blast.wordsize.11???
???blast.wordsize.12???
???blast.wordsize.13???
???blast.wordsize.14???
???blast.wordsize.15???
???blast.wordsize.default.message???
???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
???blast.filtering???
???blast.on???
???blast.off???
BLAST time is limited to 30 seconds
