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Echinobase
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Echinobase Accession
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Echinoderm mRNA
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Echinoderm CDS
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
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BLAST Databases
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Download BLAST databases
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_003728705.3 PREDICTED: Strongylocentrotus purpuratus huntingtin-interacting protein 1 (LOC580390), transcript variant X2, mRNA TAAATACATTAGAGATCGGCGAAGTCGAAGACAAAACGTACGTAGTAGTAAGTTAATCCAACAACTGTCA TCGAAATACCATCAGATCCTCACGGTACTGTTCATATTTTATAGCATTTTCAGGTGGATTGATCAAATAT CTTGGATTCTTTTGATTAAGATTCGTTATAATGGCGTCTTCATTATCAAGCAGGCTATCATCCGTTCGGA GGAATACAGACAGCCTTGAAACAGAGCGACAAAATTTCATCAAACGGCAGCAAACGAGTGTGAACAAGGC AATCAATGCGCAGGAAGTCCCAGTCAAGGAGAAACATGTCAGAAGCATCATCATCGGAACCTTCCAGGAG AAGGGGGCGTCGACCTTCTGGAGTGTTGTGTGCAGGCTACCGGTCCAGGGTACCCCGGTGGTGTGCTGGA AATTCTGCCACACCCTTCATAAGGTGCTCAGAGAGGGGCATGAAGAGGCTCAGAAGCAGCTTCGAGAACA TACAGACCATCTAAAAGATCTTGGTAGAATGTGGGGTCATTTCCACGATGGCTACGGTAAACTGAATGCC GCCTACTGCAGTCTTCTCAACACCAAATTGGAATTCCACAAAAAGAATCCACTGCTGCCAGGCAATCTTG TACTACCACAGCCAGAGAAAGACATTGAAAAAATGTGTGAAAATGATATCAATAACTACTTCCAGATGTC CGTGGAAATTTTTGATTACTTAGAATCTCTCATCGCATTGCAAGCAGCAGTCTTCAAATCCTTTAACCTG TCCAAACCAATGTCGGGGACACCGTCGGGCCAGTGCCGTCTTTCGCCCCTCATCGCGGTCATCCTGGATT CGGGCCAGCTCTATGACTTCAGCGTCAGGTTACTCTACAAACTTCACGCATGCTTGCCAGAGGACACACT GGACGGTCATAGGTCTCGGTTTCTGAAGCAGTTCCATGCTCTGAAGGAGTTCTACGCCAAATGCAGCAGC ATCATCTACTACAGAAGACTCATCCAAGTACCCACTCTACCTGCAGAGCCTCCAAACTTCTTTGTGGCTT CCATGAATCAAGACACCTACATCAGCCCAGCTGTGATGCTTGCCCTCAATGAGTCTATGCTTGATGGCAG TGGAAGAGATAGCCCTCCGCCTCCCAGTGAAGCATCATCCATTGAAGAGCCCGTCTTTGAGAAATTTGAG GAACCTGTGATGCACAGTGCTATGTTAGTAGACCTCATGTCATCTCCACCCCCGCAACAGAATGGACAAC AGTCCCAACAACAGCAAATTCAGCAGAGTGGTCCAGATGAAAGAGATTGGATCATTGAGCAGCTGAGAGA GGAGGTAAACCAGCTCAAGTTTGAGCTCGAGAGAACCAAAAAAGAAGATCAGCGAATCATTGAAGCACTC AAGAAACGACTCATGGAAATGGAACAGGAGATGAACGAACATCGGACAGTGGTGGAGACACAGTGTGAGG AAAATGAAACGTTACGGGACAAAGTAAAGGAACTTGAACATGCTGCTCTCATGGTCTCAGAGGAGAAATT GGTAGATGCAGAAAGGAGGTCCAAAGTAAATGAAGAGAGATTCAAGAAGATGAAAGATGTCTACAATAAA CTGAGAGAAGAACATCTAGGCCTCCTGAGAGTGAATGCTGAAGCTAACAAGCAACTCACAACGGTATCCA AGTGCTCAGAGGAGACGGTCTTGGCGAGGCAGACGGCTGAGCAGACCGTCGAGAAGCTGCAGATGTCCAT CGCTCAGACAGCCAGCAGGGAGGCTCAGCTCAAGAGGCAAATGGAGGAACAGAGGAAAAAATTGCTTGCC AAGGCTGTGGAGGCTGCCGAGGAGACGTTGAGACTCATCACACAACAGATGGACGATCCTCAGTTTGCAT CAGCTACGTGTACTCCAGAATATTTGCAGAGTAGAGCGCCCATAGCCGATGAATGTGTGAATAACCTTGA GAGATGCTTCAACTCATACCAGCAGAACAGCAACGATTTTGGAGGATTGATCGGTGCCATCGCCTCCTTT TCTCAATCCCTCGGAGAATACATGCTGCAGGGCAAAGCCACCTCAAATCTTGCTCCTGTGGATGTCGGAG AAAGATTGTCATCCAATTGCCATGCGACATGTAGCAGTGCCTTGACTGTACTTCATGCCTTGAAGGAAGA GGACCAGCAGGGCTTTACCCGGAATGAAGGCGACCTGAGGGAGAACCTTCGTGCTATCTCTAACCTCACA CAGGAGCTGATATCCGAGGAGATAAGTAGTACAGAAGAAATTGGTGATCTTGTGGAGGCAGAGATGCAGT CCACAACAGACCTTGTCGACCAGGCTGCTAGTAGGATAGAGGAGATGCTGAAGAGGTCGAGAGAAGCCGA CACCGGTGTGAAGCTGGAGGTGAATGAGAGAATCCTCGACTCCTGTACTCAACTCATGATCTGCATCAAA GAACTCATCACCAAGTCAAAGTCACTCCAACAAGAAATCGTCGCAAGTGGACGGGGTTCAGCAACCGCCA AGGAGTTCTACAAGCGTCATCATAGATGGACAGAGGGCCTCCTCTCCGCTGCTAAGCTGGTCGGGGTCGG AGCTTCTCATTTGGTTGATAGCTCTGACAAGTTGATGAAAGGGAAAGGGAAGTTTGAGGAGCTCATGGTT TGTTCCCACGAGATCGCAGCCAGCACCGCTCAGCTGGTGGCAGCGAGCAAGGTCAAGGCGGACAAGGGAA GCCCCAACCTCAAGGGCCTCCAGGTCGCATCCAGGAACGTCGCCACGGCAACGGCAGGAGTGGTGGCATC CGCCAAGACGGGTGCACAGATGATCGAGGAAGGAGATTCACCCGACTTTACCAAGATGACTTTGACACAG ACCAAGCGTATGGAGATGGAGGCCCAGGTGACCGTCATAGAGCTGGAGAGTAAGCTAGAGAAGGAGCGCG TCAAGCTGGCGGAGCTCCGGAAGCAGCACTACCAGCTTGCAGGAGCCTCAGAGGGATGGGAAGAAGGGGA TAGCAAATAATACAGGAGGATGGGGACTTTGGAGGACAAGGAGAATATGCTGATCTTGTGTGAAGAAGAT GAATTCAACACAAGTTTCTTTGAGCAGAGGATAGGAGGGAGAGGGTTTAGGCAGGTAGACCCATAGCACG TGGAGAGAGATAGTTGTGACATGCTCAAGCAAGTGCTGTCGTAGTTTAAATCATGGAGCTCCAGATAGTG TCCCTTCTCCAAAAAATGTCTGGAAATGTTTTCTTTGCATCCATCCATGTCCGTCTGCTTGGAAGACAGC AATAGAGTGAAGAAAAATTATTGAGTGCTTATAGTTACCGTACCTCATGGAAAACGATGCATTGAAAAGA GCCTCAAGATCAACCTTGCCACGAGAAACCAACAATGTTGTTTATAGACCAAGTTATTCATGTCAGATAA TGAGTTAATGCACAATACCAAACACATGAACCAGGTACGATTTTGTTTGTAGACCAATTTACTCATGTCG AGTAATTAGTTTATCCACAATACCAAAAACCTGAAAATGTTTCCATTATGGCTGCAAACCATATGTCCTT TGTCGGTTAAAGTTGCTCATGCTTGGGTATATAGAGGGCAGCACACAGACGTACGCACGGGAGCGTAATA CCCGTAGGCTGGAGTGTTATGTAGTGATCGCCAAGTTGCCTACTTCATGAACGACTATATACCCATGCAT GAACATCTTAAGTTTATGTGAAGTATGAATAGCGCAGGGAGATTTTTAAGGTCATGTTCCTGTAGCGCAA TTGCAAAAAATTTCGAGAGAATCAACTTAAGGTTGGGTTCAATACCCTACAGTATCACCTATAGAAATCA TGTTCAGATTATGTAATATGAGCGATGGTTCAGTGGTAGAGCAGTGGTTTCATAACCAGGGGGTCCTGGG TTCAAAGCCAAGCCAAGTCAATGTACTAGTGCCTTTTCGGTAGGCATTAAGAAGTACCTCAGAGAGGAAT AAAGCTGTCGATCCCCTGGTTGATTAATTTCAAGCAAACAATTGCGTCCATGTATAGCAGTTGGGTAAAA TAAACCAAACCAAAAATTGCAATAAGTGATACGCAAGTCTATTGCAATTACCATAGGCTGATTTCTTGAA AGCTTTTGTGATTTTGTTCTTATATTTCTCTGAATAGTGTTTTGTTTTCTTCTCTTGTGTCCTACAGAAA TATCACAAATATTAGGTGCTAAACTGAACATCATAGCAGTCATGGAGACTGCATGCATATATTTATTTAG TTTTTGTCACATATACAATGTATGTAGCTTATTTATCCGCATGGGGGAGTTGAAATAGCCCTGTATATGA GCTGTCATATATTAAACCTGTAATCGATATCGTCAATTGTTTTCTTGGAATCAAGAATGATTCATGACTC AATAATATATACGTAACGCGCTTAGAGACGGTATTCCGTATTAACCGCTATATAAATCCAGATTTTATTA TTACTATTATTGATAAATCACTTATTCATGAGTTACATATAATTATATCCCACATAGCAAGAATCTTGCA ACATGGTTGGTCCAAATGAGGTCACATGAAAAATGATAATTTACATGTCTTGACTGTCACAGTGAATGTA AAAACTATCACATTATATTTGATAGTCTTCGTTCGCTGATACTGCCTGGGCATACACATTAGGAGCTACA TGTAATGGACGATGGTTTTGCAAAATATGCGTACGCTTTTGTAGTGGAGGTCAATGCAAAGCACGTATGT GCAACAACACACAAGCAGACGCAGCTTGCTACTGTACAGATAAATTCAATGTATGTTTAGCTTTGACTTT TGTGTTCATCATTCCTCTTCTCATTGGAAAAATACTGTCGACGTGGGATATAAAGCAAATAATCACATCC CTTACTCTGGGGGATGGACACACTATTATCGCCTCGGTTATCTTGGGGGCTCTGCTGTCTTCCCTCGCCT TTGGCAAGATAGTAGCCCGAAGATCATTTCTGCGATGATAGTTTGTCCCTTCGCAAGAGTCGTTGGTTAT TATTTGCTTACTGAATAATAGTAGCATCAATACTTACAAAGGTCAAGGCAATATGATTTGGAAACAATTG TCTCACAAATTTACAGTTGCGGTACATATTTACCATTACCCGGTTGCAATGTCTGGTTTATAATTTGCTT TCATTTTAAATAGTTGCCCCAAGTGTTGCAAGTATGCCCCTTGTAGAATATGTGGGTTTCTAAATGAGTT GTAATCATATATGTTATAATGTACAATTATCTTTTGTTGTAGATTTTTTCTTTTATATATATATATTTAA CAAATCATGCATGGAAGCCTGTATAATGATGTATAGTGAATCAAAGAATGAAGTAATATGTTATGAAGAA GGCCTAAAATTGCCGCCGCTTTTTCAAAATTTGTACGAAAATTGTTCAACTTCCATGCATTTCTTACTAC TTGTTGTATTTATCAAAAATAATTTCTATATTCTATTTTTCTATTTATCACTCATGTATATACCATTGTA AGAGGAAGAAAATGTTGAACGATTGCTTTTTTGTTGTAACTTAAGTGTTCCAACAACCTGCATGTGTATA TAAAAAAAAAATCTTCATTCAAATTCAAATAAAGAGAACAGAATTGGATAGAGGACAATAATGAGATACG TTAATTAATTCAAGGCAATGATGAAATCATTCAACTTGAAACATGAAGACATTAATATCTGGTAAATCAT TCTTGTGGATTCTTTTGATTCAAGTACATTTTTTATTTAGGATGGCCCGAGGATCATTTCTGAAGCAGTA TTAAAATCCATGAAATTTATATTTGCATGCAAAAACATTTTTCTCAATTGCCAAGAAATTGAAAGTAATG ATTATATGATCACAAAGTGTCTTGAAACCTGTAAGGTGAATGATTATTACTTTCCATAAGTTTTATTAAA GGTCTTAGAAAACTTAATTTCGATTTTACATAAAATTGAAATGTGATATTCATGTGTGGTTTTAATTTCA TTAGGTATATGAAATCATACTTTTTCACTTTTTTTTTTTTTAATGGGGGGGGGGGGGGGGGGGGGGGGGT CAGGGGAAAACGTGTTTGAACTTTATATATCGGAATGGATAAACTTGTTTGGCTTATTTGTGCATATGAT TTCTTTTACAGATATGAATTTTCATGCAAGGATTTCAGGCCTAACTAGATTAATATCACAAAGGATATAC TTGCTGGACACAATTTGTTAAGAATGTTTTCAAATTAGATTATTATCTTATTGATGGTTTTGATCTCTAA TTCGTATGGCCTGATCATATCATTTTTTATGTTCATAATGTTTCCCGTAATTAAACTGTGGTAAGGGGAC TCTTTCACTTTAAAAATACATGTTCAAACATGTTCTTGGAGAATTTTGTTTTTCTCACATTCAAAGAAAG ATTAATGAACAAGAAATTATTTAATGGGCATGTCAAGGTATTAAAAAGAATGTTTTACGGCTTAGCATAT ATACAGAATGTTGCTATGCAGTTGAATACTTAAATAGGCATTATTTCTTATATACATGTACATGTATTTA ACTGTTGCTTTCCTTTTGAGTGTAATGCTTCCTATATGTGTGTACATAAAAAACTGTGTATACTCTTATC ATAATAAAATGTGATATGACAAACAA
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???blast.matrix???
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???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
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BLAST time is limited to 30 seconds