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Echinobase
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Echinobase Accession
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Echinoderm mRNA
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S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
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BLAST Databases
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Download BLAST databases
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_003728706.3 PREDICTED: Strongylocentrotus purpuratus huntingtin-interacting protein 1 (LOC580390), transcript variant X3, mRNA TGGGAGGACTCTGAATTCTGAATAGACCGGTAGTAATTGACACCACCTATAACTCTTGGCTGGAAGCTAG CTGTATGTTCATTGTACAATGCTGAATCCTGTACCAGATTTGATCTGCATGGACTTGTAAAATCTCTGCT GGTAGCTAGTTTGTGCAGTTCATATCCTGTTCTGATCCAGGAAAAGTTGGAATAATGGAAGGCTTAATGG AAGGTGTCTTTTCCTCAGGAAGAAAGCGACAAGTTCAAACGAGTGTGAACAAGGCAATCAATGCGCAGGA AGTCCCAGTCAAGGAGAAACATGTCAGAAGCATCATCATCGGAACCTTCCAGGAGAAGGGGGCGTCGACC TTCTGGAGTGTTGTGTGCAGGCTACCGGTCCAGGGTACCCCGGTGGTGTGCTGGAAATTCTGCCACACCC TTCATAAGGTGCTCAGAGAGGGGCATGAAGAGGCTCAGAAGCAGCTTCGAGAACATACAGACCATCTAAA AGATCTTGGTAGAATGTGGGGTCATTTCCACGATGGCTACGGTAAACTGAATGCCGCCTACTGCAGTCTT CTCAACACCAAATTGGAATTCCACAAAAAGAATCCACTGCTGCCAGGCAATCTTGTACTACCACAGCCAG AGAAAGACATTGAAAAAATGTGTGAAAATGATATCAATAACTACTTCCAGATGTCCGTGGAAATTTTTGA TTACTTAGAATCTCTCATCGCATTGCAAGCAGCAGTCTTCAAATCCTTTAACCTGTCCAAACCAATGTCG GGGACACCGTCGGGCCAGTGCCGTCTTTCGCCCCTCATCGCGGTCATCCTGGATTCGGGCCAGCTCTATG ACTTCAGCGTCAGGTTACTCTACAAACTTCACGCATGCTTGCCAGAGGACACACTGGACGGTCATAGGTC TCGGTTTCTGAAGCAGTTCCATGCTCTGAAGGAGTTCTACGCCAAATGCAGCAGCATCATCTACTACAGA AGACTCATCCAAGTACCCACTCTACCTGCAGAGCCTCCAAACTTCTTTGTGGCTTCCATGAATCAAGACA CCTACATCAGCCCAGCTGTGATGCTTGCCCTCAATGAGTCTATGCTTGATGGCAGTGGAAGAGATAGCCC TCCGCCTCCCAGTGAAGCATCATCCATTGAAGAGCCCGTCTTTGAGAAATTTGAGGAACCTGTGATGCAC AGTGCTATGTTAGTAGACCTCATGTCATCTCCACCCCCGCAACAGAATGGACAACAGTCCCAACAACAGC AAATTCAGCAGAGTGGTCCAGATGAAAGAGATTGGATCATTGAGCAGCTGAGAGAGGAGGTAAACCAGCT CAAGTTTGAGCTCGAGAGAACCAAAAAAGAAGATCAGCGAATCATTGAAGCACTCAAGAAACGACTCATG GAAATGGAACAGGAGATGAACGAACATCGGACAGTGGTGGAGACACAGTGTGAGGAAAATGAAACGTTAC GGGACAAAGTAAAGGAACTTGAACATGCTGCTCTCATGGTCTCAGAGGAGAAATTGGTAGATGCAGAAAG GAGGTCCAAAGTAAATGAAGAGAGATTCAAGAAGATGAAAGATGTCTACAATAAACTGAGAGAAGAACAT CTAGGCCTCCTGAGAGTGAATGCTGAAGCTAACAAGCAACTCACAACGGTATCCAAGTGCTCAGAGGAGA CGGTCTTGGCGAGGCAGACGGCTGAGCAGACCGTCGAGAAGCTGCAGATGTCCATCGCTCAGACAGCCAG CAGGGAGGCTCAGCTCAAGAGGCAAATGGAGGAACAGAGGAAAAAATTGCTTGCCAAGGCTGTGGAGGCT GCCGAGGAGACGTTGAGACTCATCACACAACAGATGGACGATCCTCAGTTTGCATCAGCTACGTGTACTC CAGAATATTTGCAGAGTAGAGCGCCCATAGCCGATGAATGTGTGAATAACCTTGAGAGATGCTTCAACTC ATACCAGCAGAACAGCAACGATTTTGGAGGATTGATCGGTGCCATCGCCTCCTTTTCTCAATCCCTCGGA GAATACATGCTGCAGGGCAAAGCCACCTCAAATCTTGCTCCTGTGGATGTCGGAGAAAGATTGTCATCCA ATTGCCATGCGACATGTAGCAGTGCCTTGACTGTACTTCATGCCTTGAAGGAAGAGGACCAGCAGGGCTT TACCCGGAATGAAGGCGACCTGAGGGAGAACCTTCGTGCTATCTCTAACCTCACACAGGAGCTGATATCC GAGGAGATAAGTAGTACAGAAGAAATTGGTGATCTTGTGGAGGCAGAGATGCAGTCCACAACAGACCTTG TCGACCAGGCTGCTAGTAGGATAGAGGAGATGCTGAAGAGGTCGAGAGAAGCCGACACCGGTGTGAAGCT GGAGGTGAATGAGAGAATCCTCGACTCCTGTACTCAACTCATGATCTGCATCAAAGAACTCATCACCAAG TCAAAGTCACTCCAACAAGAAATCGTCGCAAGTGGACGGGGTTCAGCAACCGCCAAGGAGTTCTACAAGC GTCATCATAGATGGACAGAGGGCCTCCTCTCCGCTGCTAAGCTGGTCGGGGTCGGAGCTTCTCATTTGGT TGATAGCTCTGACAAGTTGATGAAAGGGAAAGGGAAGTTTGAGGAGCTCATGGTTTGTTCCCACGAGATC GCAGCCAGCACCGCTCAGCTGGTGGCAGCGAGCAAGGTCAAGGCGGACAAGGGAAGCCCCAACCTCAAGG GCCTCCAGGTCGCATCCAGGAACGTCGCCACGGCAACGGCAGGAGTGGTGGCATCCGCCAAGACGGGTGC ACAGATGATCGAGGAAGGAGATTCACCCGACTTTACCAAGATGACTTTGACACAGACCAAGCGTATGGAG ATGGAGGCCCAGGTGACCGTCATAGAGCTGGAGAGTAAGCTAGAGAAGGAGCGCGTCAAGCTGGCGGAGC TCCGGAAGCAGCACTACCAGCTTGCAGGAGCCTCAGAGGGATGGGAAGAAGGGGAGGATGGGGACTTTGG AGGACAAGGAGAATATGCTGATCTTGTGTGAAGAAGATGAATTCAACACAAGTTTCTTTGAGCAGAGGAT AGGAGGGAGAGGGTTTAGGCAGGTAGACCCATAGCACGTGGAGAGAGATAGTTGTGACATGCTCAAGCAA GTGCTGTCGTAGTTTAAATCATGGAGCTCCAGATAGTGTCCCTTCTCCAAAAAATGTCTGGAAATGTTTT CTTTGCATCCATCCATGTCCGTCTGCTTGGAAGACAGCAATAGAGTGAAGAAAAATTATTGAGTGCTTAT AGTTACCGTACCTCATGGAAAACGATGCATTGAAAAGAGCCTCAAGATCAACCTTGCCACGAGAAACCAA CAATGTTGTTTATAGACCAAGTTATTCATGTCAGATAATGAGTTAATGCACAATACCAAACACATGAACC AGGTACGATTTTGTTTGTAGACCAATTTACTCATGTCGAGTAATTAGTTTATCCACAATACCAAAAACCT GAAAATGTTTCCATTATGGCTGCAAACCATATGTCCTTTGTCGGTTAAAGTTGCTCATGCTTGGGTATAT AGAGGGCAGCACACAGACGTACGCACGGGAGCGTAATACCCGTAGGCTGGAGTGTTATGTAGTGATCGCC AAGTTGCCTACTTCATGAACGACTATATACCCATGCATGAACATCTTAAGTTTATGTGAAGTATGAATAG CGCAGGGAGATTTTTAAGGTCATGTTCCTGTAGCGCAATTGCAAAAAATTTCGAGAGAATCAACTTAAGG TTGGGTTCAATACCCTACAGTATCACCTATAGAAATCATGTTCAGATTATGTAATATGAGCGATGGTTCA GTGGTAGAGCAGTGGTTTCATAACCAGGGGGTCCTGGGTTCAAAGCCAAGCCAAGTCAATGTACTAGTGC CTTTTCGGTAGGCATTAAGAAGTACCTCAGAGAGGAATAAAGCTGTCGATCCCCTGGTTGATTAATTTCA AGCAAACAATTGCGTCCATGTATAGCAGTTGGGTAAAATAAACCAAACCAAAAATTGCAATAAGTGATAC GCAAGTCTATTGCAATTACCATAGGCTGATTTCTTGAAAGCTTTTGTGATTTTGTTCTTATATTTCTCTG AATAGTGTTTTGTTTTCTTCTCTTGTGTCCTACAGAAATATCACAAATATTAGGTGCTAAACTGAACATC ATAGCAGTCATGGAGACTGCATGCATATATTTATTTAGTTTTTGTCACATATACAATGTATGTAGCTTAT TTATCCGCATGGGGGAGTTGAAATAGCCCTGTATATGAGCTGTCATATATTAAACCTGTAATCGATATCG TCAATTGTTTTCTTGGAATCAAGAATGATTCATGACTCAATAATATATACGTAACGCGCTTAGAGACGGT ATTCCGTATTAACCGCTATATAAATCCAGATTTTATTATTACTATTATTGATAAATCACTTATTCATGAG TTACATATAATTATATCCCACATAGCAAGAATCTTGCAACATGGTTGGTCCAAATGAGGTCACATGAAAA ATGATAATTTACATGTCTTGACTGTCACAGTGAATGTAAAAACTATCACATTATATTTGATAGTCTTCGT TCGCTGATACTGCCTGGGCATACACATTAGGAGCTACATGTAATGGACGATGGTTTTGCAAAATATGCGT ACGCTTTTGTAGTGGAGGTCAATGCAAAGCACGTATGTGCAACAACACACAAGCAGACGCAGCTTGCTAC TGTACAGATAAATTCAATGTATGTTTAGCTTTGACTTTTGTGTTCATCATTCCTCTTCTCATTGGAAAAA TACTGTCGACGTGGGATATAAAGCAAATAATCACATCCCTTACTCTGGGGGATGGACACACTATTATCGC CTCGGTTATCTTGGGGGCTCTGCTGTCTTCCCTCGCCTTTGGCAAGATAGTAGCCCGAAGATCATTTCTG CGATGATAGTTTGTCCCTTCGCAAGAGTCGTTGGTTATTATTTGCTTACTGAATAATAGTAGCATCAATA CTTACAAAGGTCAAGGCAATATGATTTGGAAACAATTGTCTCACAAATTTACAGTTGCGGTACATATTTA CCATTACCCGGTTGCAATGTCTGGTTTATAATTTGCTTTCATTTTAAATAGTTGCCCCAAGTGTTGCAAG TATGCCCCTTGTAGAATATGTGGGTTTCTAAATGAGTTGTAATCATATATGTTATAATGTACAATTATCT TTTGTTGTAGATTTTTTCTTTTATATATATATATTTAACAAATCATGCATGGAAGCCTGTATAATGATGT ATAGTGAATCAAAGAATGAAGTAATATGTTATGAAGAAGGCCTAAAATTGCCGCCGCTTTTTCAAAATTT GTACGAAAATTGTTCAACTTCCATGCATTTCTTACTACTTGTTGTATTTATCAAAAATAATTTCTATATT CTATTTTTCTATTTATCACTCATGTATATACCATTGTAAGAGGAAGAAAATGTTGAACGATTGCTTTTTT GTTGTAACTTAAGTGTTCCAACAACCTGCATGTGTATATAAAAAAAAAATCTTCATTCAAATTCAAATAA AGAGAACAGAATTGGATAGAGGACAATAATGAGATACGTTAATTAATTCAAGGCAATGATGAAATCATTC AACTTGAAACATGAAGACATTAATATCTGGTAAATCATTCTTGTGGATTCTTTTGATTCAAGTACATTTT TTATTTAGGATGGCCCGAGGATCATTTCTGAAGCAGTATTAAAATCCATGAAATTTATATTTGCATGCAA AAACATTTTTCTCAATTGCCAAGAAATTGAAAGTAATGATTATATGATCACAAAGTGTCTTGAAACCTGT AAGGTGAATGATTATTACTTTCCATAAGTTTTATTAAAGGTCTTAGAAAACTTAATTTCGATTTTACATA AAATTGAAATGTGATATTCATGTGTGGTTTTAATTTCATTAGGTATATGAAATCATACTTTTTCACTTTT TTTTTTTTTAATGGGGGGGGGGGGGGGGGGGGGGGGGTCAGGGGAAAACGTGTTTGAACTTTATATATCG GAATGGATAAACTTGTTTGGCTTATTTGTGCATATGATTTCTTTTACAGATATGAATTTTCATGCAAGGA TTTCAGGCCTAACTAGATTAATATCACAAAGGATATACTTGCTGGACACAATTTGTTAAGAATGTTTTCA AATTAGATTATTATCTTATTGATGGTTTTGATCTCTAATTCGTATGGCCTGATCATATCATTTTTTATGT TCATAATGTTTCCCGTAATTAAACTGTGGTAAGGGGACTCTTTCACTTTAAAAATACATGTTCAAACATG TTCTTGGAGAATTTTGTTTTTCTCACATTCAAAGAAAGATTAATGAACAAGAAATTATTTAATGGGCATG TCAAGGTATTAAAAAGAATGTTTTACGGCTTAGCATATATACAGAATGTTGCTATGCAGTTGAATACTTA AATAGGCATTATTTCTTATATACATGTACATGTATTTAACTGTTGCTTTCCTTTTGAGTGTAATGCTTCC TATATGTGTGTACATAAAAAACTGTGTATACTCTTATCATAATAAAATGTGATATGACAAACAA
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???blast.matrix.pam30???
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???blast.gapedalgin???
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Automatically set to False for sequences longer than 4500 bytes
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BLAST time is limited to 30 seconds