Click here to close
Hello! We notice that you are using Internet Explorer, which is not supported by Echinobase and may cause the site to display incorrectly. We suggest using a current version of
Chrome
,
FireFox
, or
Safari
.
Echinobase
???banner.login???
???banner.register???
Contact Us
Cite Echinobase
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
BLAST
Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
JBrowse2 Tracks
Genes
Gene Search
Gene Search Tips
Gene Nomenclature Guidelines
Gene Name Questions
Expression
Search Anatomy Items
Quantitative Expression Datasets and Plotting Tools
Anatomy & Development
Search Diseases
Echinobase Anatomical Ontology (ECAO)
L. variegatus
Atlas of Development (pdf)
Resources
Protocols, Reagents and Data on EchinoWiki
Resource for Developmental Regulatory Genomics
Davidson Lab Gene Regulatory Networks
Libraries, Vectors and Screening
BAC Table
???header.navigation.searchAntibodies???
???header.navigation.searchMorpholinos???
Guide RNAs (gRNA)
Cis-Regulatory Elements (CREs)
Literature
Papers
Books
Cite Echinobase
Community
Find People
Find a Lab
Organizations
Job Postings
Downloads
Data Download
Gene Page Reports
Browse Download Site
BLAST Databases
???blast.header???
Download BLAST databases
???blast.alignment???
???blast.program.blastn???
???blast.program.blastp???
???blast.program.blastx???
???blast.program.tblastx???
???blast.program.tblastn???
???blast.database???
-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_041605059.1 PREDICTED: Lytechinus variegatus telomerase protein component 1-like (LOC121412153), mRNA GCGAACTTACATCACTGCTTATCTTGCGTAGGCATGTTGCAAGACCATTATCCCCCGGAACTTCCGGGGA CCGGACCTACATATCGCGGTAAGGTACCGGGCTGGGCCGGCCAGGGGCGTGATCTACGGCATACTACTAC TAGATCATGTCTTACAAGCTCATGTGGCACTTGACAATGACAGACTTCGGAAATTTATAGCCAGCAGAGG CAGAGCTGTACGAGACACAGATGAAGCTAATATTCATGCCACATGTAGTAAAGAAGCTAGAACTCTAGAA GAGGTAATTTCATCAGATTCAAGGCAAGCCAAGACCCAATATCATCTGACTGAAGTGAAGACGTCTGAAC TTTGTCTTTGTGTGACTGAGACCTTCTTCACATTTTCGTCAATGTTTTTATACTATAGTTTACGTTCTTG CTGTCAATGTGAACAATTCATACTTATGAGTGAAGAAAAATCAGCTTCTAGTGTCGATATTGAATTTGTC AACTTGTCAAGATGAGTTACCTGTCAAACCCTCTGTTGACGGGTTCATTGTCATCCGGTCTAACAGCAAC AAAGCGAAAGGCAAGGGATGACGGTAGCAGTCAAGCGTCGGTCCCAAGCAAGCAGGCGTCCACTGGAATG TCCCTCCAAAACAGTAGCCTCCTCCTTGGAAGCTCCCTACTTGGTGGCGTCTCCAAGAAAGATGGCAAGT CCCAATTCGGGCTGGGCATGAAGTCATCTATCCTGGGCACGAAGTCCCCACTGATTGAAAACAAGCTGCT CTCTTCTGCAACAGCCAATACTGGTTTGCATAGTAAGCTCCAGGGCAGCTCTGGAAGATCCCTTCTAGCA GGTGGAAGCTTGCTATCGATGGGCAGCTCTCTCTCATCATCATCCTCTTTATCAGCCTCAGGGTACGGCA GCATCCTGAAGGGTTCCCAGAAGACCCGCAGCTTGAGCCGTAGCAACAGCACCCAAGCTGAGGAGTCCAA GACCAAGAAGATCAAAGCCCAGCATCTTCCAGAGCAGTTGAAGGAGGACAATATCATTGACCCAACCCTT ACCACATGTGAGCTGCCAGACTACGATTTCTCACGACAGCTTCCAGTTGCAAAGCCAGCTGTGCAGGAAT ATGATCACCAGTTTGAGAAGCTGGACGTGGCCAAAACTCTGACAACAAAGCCAGGGGAAAATTACTCAAC AAAATTAAAGCAACAGTTCATCAATGCTGTTAGTGCTTCCCTGATCGGTGGCCCAAACTTTCATGAGCGT GGAGATAGCACAAGAAAGAATATCAACAGGCAGGCCACTTCCATCATCAACGAAGATCCTGAATTTATTC TAAAGGTTGCACTGTATACGAGGAAGGAGTTGAATATTCGTACCACAGCCAATTTCCTGCTAGCTCTTGC GGCCATGACCCCCGAATGCCGACCTTTTCTCAGGAAGTATTTCAGCTCCAGCATTGCCCTGCCATCTGAT TGGATAGATGTAGCAGAACTTTACCAGACATTCCATGATAAGAATATCAACTACGGATCCCTGCCATCGG CCCTTCGCAAGGCCATGATTGATCGATTTCCTCGCTTTGATCAGTACCAGCTTGCAAAGTACAACAAGGA CAAGAAGAAGAAGAAACCCGCTGCCAAAACGGACAAGCCAGCCGAGGAAGAGGACCTCCCGGATGATAGA GATGATGGAGATAGTGAGAACAGTGATACTGATGAAGAGGAGATGGAGAGATTGAGCTTTACCCTCAAGC AGTTGATCCGAAAGCTTCACATCAATGATCCAGTAGACAGTGTCATGTGCCTCCTTGGAAAGAGGTACCC TGAAGACATGGAGTCCTTCTACCAGAGCCGTCTTCCCGGTACGTGGGACCCTGAGAGGGCGGGTAAGAGG ATGAAGCTTCCTACCCCAGAGACCTGGGAGACACAGGTCTCACTGAAGGGCAATAAAGCACCGGTCTGGG AACAACTCATTGACAACAAGAAACTGCCGTTCATGGCCATGCTGCGCAACCTGCGCAACATGATAGCTGC CGGGATCAGTGAGAAGCACCACAAGTGGGTCCTCTACAAGCTGACCGACAGAGGCTCGGTGGTCAACAGC AAGCAGTTTCCTTTCCGGTTCTTCTCGGCTTACGAGGTGCTTCAGAGCATGGAGCGTGAACTGGAGAAAG CAGATAAACTGAAATTGCAGTTGGCCTGTGGTGTAAGACCCCCTCAACCAAGAGGCAAGCGGGCCAGAAA GGAAGACCAGGTACCCAAGTGGAAACGTGCCAAGATGGAGAAGAAACTCAGTGAGCTGCCATATGACATT ACCATCTTGAACCGCTACCGCAAGGCCCTTGACACTGCAGTCAAGATCGCCACCAGTTACAATGTGAAGC CAATCCCCGGCAAGACGCTTCTGCTTTGCAATGTTGGTAGTTATATGGATACCCCTTGCTCCTCTGCCAA GGGGCTTGGAAAGAAGAGAACTGTGTTGGAGGTCGGTATCCTGTTGGGTCTGATGTGCAAGTATTCCTGT GAGCACTGCGACATGCGCATCTTCGCCAGCAGCGCCCATTCCGCCGTAGAGCTGGAATCTGGCACCATCC TGGATAACATGACCAGCGTCTTGAGCCAAGCCCGGATCATAGCACGCCAAGAAGTACATGGGCAAGGACT AGATCCCACCATTCTGGGGGAAATTCTGAGAGATAGGGTCGAGCTGGATAACCTTGTTATACTGAGCACC TCCTCTGCGCACGGAGGGAAGGAAACGGAAATGATATCTGAATTCCTGTCCAAGTATCGGCGTGTCGTCA ATGAGAATCTGCTCTACGTCAATGTCGACTTGAGCGGAGGCAGATGCAGTATGACTACATCGGACACTCC TTCCCATCCAAACGATATCTTCATTGCGGGATACAGTGATCAGATCTTGAGGTTCATCGCTGAGAGGGGC GATACTGGACAGGTCACTCACGTCCAGAACATTGACAAGGCATACAATCTCACTGATTGCAAGATCATTG GTGGAAAGAAGAAAACTCTGGTTTCTCCAGAGATTCCTTTAGCTCTACCGGCTTCCCAACAGACCAGAAG GCACCATACTTTACGTGTCTTCATCTCCTCCACGTTCCGCGACATGCACGGCGAGCGCGACCTCCTGACC CGGTTCGTCTTCCCGGAATTGCGGGCCAAGGCGCGCACCCGCTTTGTCAACCTGTACGAGGTAGATCTGA GGTGGGGAGTCAGTGAGGAACAGACAAGACACAGCAGCTCTGTAGAGATCTGCTTACGGGAAGCCAATCG GTGTGATCTCTTCATCGGCATCCTGGGAGATCGCTATGGTTACGTCCCAAACGACTACCCCGATATGAGC GACATTGAAGACTTCGACTGGCTGTCGGCTCATCCCAAATCGCGTTCAATCACCGAGTTGGAGATGTATC ACAAGGCTCTCAGAAACTGGGGGACAAGCAACAATGCTTTCTTCTTCATCAGAAACTCAGAATTCATCAA GAATGTCCCAAACAAGTTGAGAAGTCAGTTTGTTGATGAGAATACCCAGAGGAAGGAGAGACTCGCCAGC TTGAAGGATACCATCCGTACCAGTGGCTGTGAGGTCTTTGACGGTTACCCATGCCATTTTGGTGGGGTAG TAGGCGGTAAGCCAGTTGTCGTGAACCTGGAGGAGTTTGGCCGCCGTGTCATCAACAATATCTGGAACTA CATCAAGCATGCATATCCAGAAGATGGTGAGATCCTTGATGAAGTAGTTCATGAGAGAGCACAGCATGAC ATGTTCCTCCAGTCACAGCTAGCAACCTTTACCGGTAGAAAGAACCAGGTCAAGCAGTGTTTGGATATCA TCAAGAAACCTGAGACAGGGTTGTTGATGGTCACAGGAAAGCAGGGGTGCGGCAAGACGGCTTTACTGGC CTCTGTAGTGGACACTCTACAGAGCAGATCTATCCATCCCATTGTTCACTTTGTCGGCGCGGTGCCAGGA TCAAGCCACGTGTCTCCGCTTCTCAAGAGACTCTGCAATGAGCTCGGCCGTCGGTACGGTCTCCAGAGCC AAGTTCCTCAAGAATACAAGAACCTGGTATCTGAATTCCCAAGATTCCTAGAGGAAGCAGCGAAGCATGT TGACTCAGCAAACAAGCTGATCATTGTTATTGATGGCGTGAGCGGTATGGACACATCTCACCAAGCCCAC AACCTGGACTGGCTACCACAGAATATCCCTCAGAATGTGGTATTTATCTTGAGTGGAGTTGCGTCATCAC CAGCCCATGCCGCTGCAGTCAGACGCCAGGCCACTGTCATTGAACTAGGACCCCTAGACCTGATGGACAA GGCAGAGATGGTCAGAAGAACACTGGCTGCCCATCACAAGACACTGGATGAATCACCATTCAATAACCAG ATGAAGCTACTTGTATCAAAGAGAGAGGCCAATCTACCTCTCTTCCTAAAGCTAGCATGTGAGGAACTGC GTGTCTTTGGAGTGTTTGAAGAGGTTTCCACTCGTCTGAAGGCGATGTCACACACCATAGGGACACTCCT CCAGGAGGTACTGAAGAGACTGGAGGATGATCATGGTCAGGATATGATTACTGTGGCCCTGGCATTGCTG GTCTCTACAAGAGATGGATTATATGAGGAGGATCTGCACTGCCTGCTAAGTCTAGACAGACAACTCAATC AAAGCAAGTACACCTACAACCAAGTGATAAGAACAGGCCTGGGTCCTGAGGTCATGCTACCTCAAGCTGA AATGTCAAGATTAGTACGAGGGATCAAATCACTGCTGGCACCTACTGGCGAGCACAGTGACCATAGATTA AGGGTCAGTCATGGTCAGATAAGCCAGGCCATTGTCCAGCGCTACATGAAGGGGGCTGCCAGTGAACTCC AAATCAGAACTCACGCATTGCTTGCAGGTTACTTCAATCACCTATCAAGGACTAAGAACGCTGCATCTCC TTGGTGTACAGACTATCCCCATGCTCTCACTGAGATGCCATATCATCTAGTACAGGCTGGATTGTTTGCT GAACTCAAGAATGTTCTGTCGGATCCGTTCTTCATCCAGGCCAAGTGCTCCTCGGGGCTGACGGCGAGTC TCCTGGAAGATTTCCAGGCTAACACATCCACCACTTCCAAGGCAATCCTTCGGGAACGCGAGAAATTCTT GACCAACCCTCTCATCACCGGCTTGCGCTCTTTCATCTCTCGACACCTCCACATCCTGACCCTCTGCCCA GGGTTGCTATGGCAACAGGCAATGAATGAACCAAACAACTCCCTCGTCCGCGATGCCATGCTGGAATCTG CGGGATCGGGAGGGAAGGGTATGGTGGCTTGGAGGAACAAGAGAGAAACTGCCGATGAGTGCACCATGAC CCTGACAGGGTTCACCGATGCTGTGCTGTGTGTAGCTATAGCTCCTGGAGCTCAGGTCTTTGCTGTCGGG ACCAAGAACTGTCAGCTCAAGCTATTTGAGATGGAAACTGGCAAGGAATTGAAGAGCTTCATTGGCCATT CTGATGCTGTGACATCTTGTTGCTTTGTTGGTAAAAGCCGTCTTGTGTCGGCCTCACGTGACAAAACACT GAGTCTTTGGGATGTGGAGCAGGGCTTCAGGGTCAACACGCTGAAGGGTCACAGGGGGCTCGTCAGCNGG TGCATCTCCGACTCCAAGGGGGTCAACCTGGCTTCCTGTGGCTGGGATTGCCGGNTCCTGATCTGGGACG GCCGCAGCGGCAAGCAGACCTCGGACATCACCGAGCCACGCCCCATCAGCTGTCTGTCCTACCATCCAGA TGGGAAGCTTCTCGTCACCGGGTCGTGGGATGCCACGCTGAAGATCTGGGATACCTTCAACAAGAAGAGG GTGGCTATTCTGCGCGGTCACCGTTCTTCCGTCCGTGCCGTGACCTATTCACCAACTGGTCGTCACATTG CATCTGCGTCACTAGATGGCGCTGTCAAACTCTGGTCGGCAGACACCGGAACACAGGTCGGCAGTCTGTG CGGCCATTCTCAGCCAATCAACCATATTGCTTTCTCAAAGAACGGGAGGGAGCTGGTCACTGTGAGCAAC GACCACAAAACAAAGGTTTGGTCTGGCAACCTCGGTAAACAGCTGGCTACCTTCAAGGGCAAGGACCAGT CAGCATCCACCCAAGCCACCTTCAGCCCGTACGGCGAGTACGTTGCCATGGGATACCATTCCGGAGAGGT CAAGGTCATCGAAGTTGCCAGCAAGCGCGAGGTCTTTGCCTCGGTGCTAAGGGAGTCGCGGGTCAAAGGA ATCGCCTGGTTGGACGATAGCAAGGATGGTTTGACCTTCTTGGTGGGTTACGAGAGCGGACATGCTGTGA TAATCAAGGGGGTTGATAAGTCCAAAACAACTGTAGTCCCACTCAAAGCAAATCATGCAGCCATCACCAG CCTGGCTTACTCCAACGCCACCCACACAGCCGCTATCACCTACGACAACATGTGTGTCGCCCTTTGGTCA TATCCGTTGGCTGCCAAAGCCGGCGCAAAGGATGGAATCCCACCTACAAGCCTCCTGCATCCTAAGTGTA ATGGAGTCATAACATGTTGTACATTCAGCCCAAGCGGAGATAGGCTGGTTCTAGGAACAAGAGATGCTAT GTTGTTTGTTTACGAAGTATGGGAATTAAATTCAGAATCTCAGCCTGTCCTTCATCTTGATAACTGTCAC AAAGATTGGATCAATTCATGTGCTTGGTCACCAGCCACCAATGTCTTGGCCACTGCATCCAACGATTCTA CCATTAAACTATGGGACATGAAAACAGGAAAGGTCAAATCTCACCTCAAAGGTCATCAGGCAGCTGTCTA CTCGGTTGCCTTCTCTCATGGGTGTGTTGTATCGGGATGCCTGGATGCATCGGTCAAGGTCTGGTCTCAT CGTGGTGTGGAGATCACCACTCTCTATGGTCACTCACAGAAGGTCAACAAGGTGGACATTCATATACCAG AAAGAGGAAGCAATGTTCCTGCAATAGATGTCGATAGCGATGATGAGTGGGACGACACGTCTGGAGCCAA CTGGTCAGATATGATGGCAGAAGAAGAATGGAAGAATCGTCATGAGAAGAAGAAGTTGGACAAAGATGCT AATATCAACCTGGAAGAGATAATGATTGCGTCGGCCAGTGATGATGGTACCACACAGTTATGGAAACCCC TACAGAGTAATGAATTGACCACGCTGATTGGTCACTCAGACCGGGTGTTGAGTGTTGCTATGGCAACCAG CGGTCAGGTGGTCACTACCTCCATGGACTGCACAGTCAAGATTTGGAAGCCCCAGCTTTCTCCCGACCTC GTCCACGTAGGAGCCCACGATGCCGAGGTATCAGCCGTTGCCATGTCAACCAAGACTAACTTTGCCGTCA CTGCAAGCAGGAATGGCAGTGCTTGTCTATGGAAGGTGAATGGGTCTAACAAGGGAGAAGGCCAATCAAT GACACTCCTTCATTCATGGATGGCTGCGGAGTGCGCCATCAATGCAGTTTGCTTCATTGGAAAGCATATG ACCCTCGCCTTGGGTAAGGATGATGGCATCATCACACTTTGGAAGATACAAGAACTCAAGGACAAACCCG GATCATACACAACCTTGCAAGGGAACAATCGTTTCTTGAATGTGTACTCCTTCACCTCCATGTCGAGCCC GGTGACCTGTCTCAGGTACGATGATGCTCAAGACATCCTGTACGTCGGCACGTGGAGCTCGGTTATTACC CTAAGGGGTTTCACCTCCAATAAGATCAAACAGAATGCAAAGGGGTAATGTACCTGCTGGGTATTGGAAA TGACCTTGGTCAAGGATAAAGGTGTCGGAGCATCTCTTACTGATGGCAAGGTGGTGTGTGGCAAGGAGAA AACTATTGGACGCTTGATATATGTGAGCTGTTCAGTCCCAGTCTCCTGGTGTCACTCCTTGATCGTTTTC TCTCCTCAAATAAGCAACCCTAGAGGATTCCTGGTTGGAGATTCTGATGGTCATGTGATGCATGTTAGTG ACAACAGGATGATCAATGTGATCAAACAGCTGAAGGGAGCAGTGACTAGTCTAGCTCTCAGCCAGGATCA CATCGTTTCAGCCTCCAGTGACGGCACAGTGAAGTTCTGGAACAAAGACTTTTCCAAACAGGGAATTGGT TTATATTTATATCGGAAGTACTCCTCTCAATACAGATGTAGATGCCATATGTCTAATGATTAA
???blast.query.upload???
???blast.options???
???blast.eval???
???blast.eval.01???
???blast.eval.10???
???blast.eval.1???
???blast.eval.001???
???blast.eval.minus5???
???blast.eval.minus25???
???blast.eval.minus50???
???blast.eval.minus100???
???blast.numalign???
???blast.numalign.25???
???blast.numalign.1???
???blast.numalign.5???
???blast.numalign.50???
???blast.numalign.100???
???blast.wordsize???
???blast.wordsize.default???
???blast.wordsize.2???
???blast.wordsize.3???
???blast.wordsize.4???
???blast.wordsize.5???
???blast.wordsize.6???
???blast.wordsize.7???
???blast.wordsize.8???
???blast.wordsize.9???
???blast.wordsize.10???
???blast.wordsize.11???
???blast.wordsize.12???
???blast.wordsize.13???
???blast.wordsize.14???
???blast.wordsize.15???
???blast.wordsize.default.message???
???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
???blast.filtering???
???blast.on???
???blast.off???
BLAST time is limited to 30 seconds