Click here to close
Hello! We notice that you are using Internet Explorer, which is not supported by Echinobase and may cause the site to display incorrectly. We suggest using a current version of
Chrome
,
FireFox
, or
Safari
.
Echinobase
???banner.login???
???banner.register???
Contact Us
Cite Echinobase
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
BLAST
Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
JBrowse2 Tracks
Genes
Gene Search
Gene Search Tips
Gene Nomenclature Guidelines
Gene Name Questions
Expression
Search Anatomy Items
Quantitative Expression Datasets and Plotting Tools
Anatomy & Development
Search Diseases
Echinobase Anatomical Ontology (ECAO)
L. variegatus
Atlas of Development (pdf)
Resources
Protocols, Reagents and Data on EchinoWiki
Resource for Developmental Regulatory Genomics
Davidson Lab Gene Regulatory Networks
Libraries, Vectors and Screening
BAC Table
???header.navigation.searchAntibodies???
???header.navigation.searchMorpholinos???
Guide RNAs (gRNA)
Cis-Regulatory Elements (CREs)
Literature
Papers
Books
Cite Echinobase
Community
Find People
Find a Lab
Organizations
Job Postings
Downloads
Data Download
Gene Page Reports
Browse Download Site
BLAST Databases
???blast.header???
Download BLAST databases
???blast.alignment???
???blast.program.blastn???
???blast.program.blastp???
???blast.program.blastx???
???blast.program.tblastx???
???blast.program.tblastn???
???blast.database???
-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_030982132.1 PREDICTED: Strongylocentrotus purpuratus diacylglycerol kinase delta (LOC765159), transcript variant X1, mRNA GAGAACACATGCGAGACATGCTGTCGGGTATGCATAACTGGTACGCCTGCTCCCACGCTAGACCCACTTA CTGCAATGTGTGTCGGGAAGCGCTCTCAGGCGTTACATCACATGGCCTTTCTTGTGAAGTATGCAAAGTC AAAGCTCACAAACGATGTGCAGTACGAGCGATGAACAACTGTAAATGGACGACGCTGTCATCAATAGGAA AAGACATCATAGAAGAAGAAGATGGCGTGATTGCCATGCCTCACCAGTGGTTAGAAGGTAATTTACCAGT CAGTGCCAAGTGTGCCGTTTGTGACAAGACTTGCGGGAGCGTGCTCCGTCTGCAGGACTGGCGTTGTCTC TGGTGCAGAGAAGTGGTCCATTCCAGCTGCAAGGCCCACTACCCCGCAAAGTGCCCCCTGGGTCACTGCC GCCTCTCCATCATCCCTCCCACGGCGCTCAACTCCATGTCCTCTGATGGGTACTGGCAGGCCTCCAAGAA CGGGTGCGGCAGCCCCCTCCTCGTCTTCGTCAACTCCAAGAGCGGGGACAACCAGGGCGTCAAGTTCCTC CGTCGCTTCAAGCAGCTCCTCAACCCAGCTCAGGTCTTTGATCTCATGAATGACGGCCCACATATAGGGC TGCGATTATTCCAAAACTTTGACACATTCCGTATCTTGGTGTGTGGCGGTGACGGGAGCATTGGATGGGT GCTCTCAGAGATAGACAAGATGGAACTCCATAAACAGTGTCGTATAGGTGTCCTGCCCCTGGGTACAGGC AATGACCTTGCTAGAGTGCTAGGCTGGGGGACAGCCTGCGATGACGACACTAATCTACAGGTCATACTGG AGAAGTTGGAGATAGCTAGCACAAAAATGCTGGACAGATGGAGCATATGGACACAGGAGATGCCCATGGC ACACGCCGAGGAGGTGACACCAGGGGAACCAGTGGAGGGGGACAACAAGATGGGCGAGGTCGGTCTGGAC GCTGAGAGCCATCGAGAGAAGGAGATGATCTCCAGCTATGAGGACTCTGTGGCAACGCATCTTGCAAAGA TACTCCACTCGGACGAAAACACAGAAGTCATCTCCTCAGCAAAGGTGCTATGTGAAACAGTGAAAGACTT TGTGGAGAAGATAGGACATGCTTACGAGGAAGGTGGATCCCATTCCAAAGACGCACAGATCATGAAAGAG AAGTGCAATCTCCTGAACGAGAAGCTGAACCTACTGCTGCAAACCCTCAAGGTGGAAGCTCAGGCAACGC CCATACCCCCTGGATCCATCCTCCCCATCATCACGGCCGCAGCTGCCGCCGCTGTTACCACCACCACCAC CACCTCGGGCGGGGGCATGGGCACCCCTACCATCCTGCCCCGCTCCCCATCATTCCATGGCTCGGAGAAG CATCTGGAGGAATCCCAGGAGAAGGACGTCTGTGAGAGCAAGGATGGGGTCGGAGACGGGGACATCCTGG AGCAGATGATGGGTCCCTCGACGTCGTCCAGGGTCTTCAAGCCTCGCGATGCACTCATGTCAAGAGCTAA CAGCCTCAAGAAGGCTGTCAGACAGATCATTGAACAAACAGAAAAGGCGGTTGATGAACAAAACGCACAA ACAGAAGAGCAAGAGGCCAAGACTATCAAAGCCATTGCAGCAACAGCAGCTGCAGCGATAACCAGTGCTA CCACACAGGGGCCTATCAAGCCTAAGGTAACCATAGTAACGCCGTCCAGCGACCTGGAGATGTCCGACGA CGACAACAACCAGTCTGCCAAAGTGCCTGACTCCTCTGGATCGACCAAAGAGGACCCACAGGGGGGTTCC AGATCACCCTTCTCCATCTATGTCTCATCCACCAAGGCTAAGATTGAGAAGAAGAAAGCGGAGCGCATTG GCTTGAAATCGCCACGGTCTCCATTCAGGATGCGTCGCATCAGCCACGGCAGCACTCTCTCCTCCCATCA TGGTTTCGGGCCTGTCGGTGTTTCTCAGAAGTTTGGCAGCATGGAAAACATTTCCATTTTGCCAGGTTTA GATACTTTATTAGGACCCAGTTTAGGGCGCACAAACCCCATGCTTAGCAAGAGTATAGGAACGCTAGCTG GAGGAATGGGCGGTGCGGGCATCATCAGTAAGGTACTGCTGGCTAACGCCGATGCTCTGTGTGCTGCAGC GTCTCCACTTATGGATCAAGATACGGAGAAAGTAGAGGGCTTTTCAGAATCCTGTGTGATGAACAACTAC TTTGGAATCGGACTGGATGCCAAGATCACCCTAGACTTTCACAACAAGAGGGAAGAACACCCAGAAAAAT GCAGAAGTCGCACCAAGAATATCATGTGGTATGGAATGTTGGGGACCAAGGAGCTTGTCCACCGGACGTA CCGCAACCTGGAGCAGAAGGTTCAGCTGGAGTGCGACGGACAGAGGATACCCCTCCCCAGTCTGCAGGGT ATCGTGGTCCTCAATATCCCCAGCTATATGGGCGGGGCCAACTTCTGGGGGACCAACAAGGAAGATGAGA CCTTCACAGCGCCCTCTTTTGATGATAAGATTCTTGAAGTCGTAGCAGTCTTTGGTGGGATGCAGATGGC AGTGTCAAAATTGATTACCTTGCAACATCATAGGATAGCCCAGTGTCGAGTGGTCAAAATCACCATCTTA GGTGAAGAGGGAGTCCCTGTACAGGTGGACGGAGAGGCGTGGGTTCAGCCCCCAGGACTGGTCAAGATTC TGCACAAGAACAGAGCTCAGATGCTAGTTAGAGATAAGCATTTTGAGAGTACCCTCAAGTCATGGACGGA GAGGAGAAAGATAGAACGCCCTCTGCAGCCCCTCATCAACGAGGAGATTGAAGTCGTGAGGCATTTCTGC GGTACAACGTCCCAGCTTATTGACACAATCAAGATTGCCGCCCAGCACAGCAGCCCCATACAGTCCGAGC TCCTGCACAAGGCCATGGCGACCGCTGCCTGCCAGGAGCGTCTCTTTAGCACCGAACGATCGACGGAGGG GATGAGCAGAAAGGTCCTTAACGAGGTTGTGGTCAGCGCAAGGAATCTGTACAGTGAGAGCAGTCTGTTC ATGGCTAGAAAGGCGTATGCGCTGCGATTGCCAGAGAACATCCTAGAAGCACTCAACCATGACATCAACG CCGTGGACAACGAGCTGCGCAAGGTGTCGACCATAGAGGGAGCTGTCTGCTATGTGGAGGAGGAGGGGCA CCATCACCACTCCCATATACCGGTGGATGTGTACAGGAAGCACACCAAGGGGAAATTCAAGATACCCATG GTGTCGAGGTTTAAGAAGCCGACGAAGAAGGACTTCAAGTCGTCAGGTGTGACTGGAGGTCTGAGCGTTG TGAAGCTATGGACCGTCGAGGAGGTAGGGGCGTGGCTAGAGGCTCTGTTGATGGGTGAATACAAGGACCA GTTCATCAGGAATGATATTCGAGGGTCGGAGCTTCTCAGTCTCGAGCGAAGGGATCTCAAGGATATTGGT GTGACCAAGGTAGGCCACATCAAGCGCATTCAACAAGCCATCAAAGACCTCGACAAAAGGGAGGTGATAG AGCCTACAGTGCTGGAGGCGGGACCTTCAGGCAGTGTTGCTCTCTGATTGGTCAGATGGACACAAGTGAT TGGACTGATCCATTTTCCACTGAAGGGGTGCATGGTTGAGATAATTTATTAAGTGTACAGGGAGGTATGG AGGTTGTAAATGTTGGTTAGAGGATGATTATACATGTAGGTGCAGAAAAGAGAAAGAAAAGAGGTTTCTT GCTAAGAAAATACCTTCATTTTGGAAAAATCATCTCTGTATTTTGTAGCAATACGACACATAAATCCAAT GTAAACTGTTTAGACTGGGAAATATATTTGAGTCTTGCAAAAGAGATGTAAATTTGGTAGGTTGTGGATA GAAAACAGAAAATGAGATGTTTTGACTTATTTATAGAAATGATGGTTGAATAAAAAGGTAATGGTTTAAA TTCAGAACATACAGCACAGAAATAAAGGTGAGCTTTTTGGTGATTATTCGACAAGAACATTTCCTTAAGG ATGGGAACAGAAATATGGACAGGTGGTCTTTCTATTCAGGTGACGACCACTTGAGCAGGTCCGATTTGAC CTTATGCATCCTCATGCTGATACTCAGAGAGTTCATTCATTTTTCGATACAGGTATCACTGAAAAATACA AAAGTGAAATCAATAATAATAATAATCATGTATTGAGATACACAATACTTGTGCAACTATGCAAAATGAG ATCTCAATAAGTGGGGCGTTTATAAGACGCATTCAGATTTTATACCAGTGTCATTTGGACATGATGTATA CAGATTTTTATCAATGTCATGTAGAACATGAGGTACACCTGATATTGCAACAGCAGGTGTATGCAAACAG TATTCTGTCACAGACAAGCTCATTCATACAGGTTTTGTCTGTTGAGATTCAGGAGGAAGCTAAATGCATG TAATGTATGTGGGATAAGGCCCTTCTGGATCTCGACAGAAAAAATAAAAATAAAAACAAATTATGACAAC TCCGCAAAGAATATGAAATAGGGCATCATTTGAAAGCTTTTCAAATGAAGTATTTCAATCTTGTACAAGA CTTGTTGCACAAAGTTTGTTTTTAAATATGTACAGGATTAATGAAGGAAAAAAAAAAATTAGAAAACAAG ACAAAGTGGTTGATGAAAGATTGTTATGTTAAATAAGAGCAGTATTGTACAGGAGTTCGTGCACAAGATT CATTTTCACCATGTACAGAAATTGTTGAGAGAAAAGAGTAGGAAAAGATAAGGAATGCACCGCCATGTTG TATAGATAAAGCAAGTACCGAATTAGAGGAGCAGGAAAAACAGTTAAGAGGCTTGAACTCTAGTTTGGGA GTAAAAGTGAAGTTACTTTCCAGTCATAGAAATAACTTGAGCTTCAACCATGTGATCTAAGATGTACATT TTTGGAAAGAATTGCCATTTCAATTTTTATTTCAATTTTGAATAGCATTGAAGATTAAGGGGACAAAATT GGGGCTGGACCCCGTTTAATTATGAAAGTATTAGCTTTTCTAGCAAGCTTTTTATGCCAATTTTGTACAT AAAAAAATATTGGATATGTTCCCAAGAGCCTGTTTTCCTTCAATTTTCTATCAGTATATATTTATAGACT TGAGAATTATAGGACATTGCATTGAGCACAAACATCCATACGTGTACATGTATTTATCTATTCCATTTTC CACTCTTTAGGTTTTCTCTTATATCTATAATAGTGTTTTTAATCAAAACGTTTTCCCCTGTGTAGTGCAG TCCTTTGGGGTTTTTTTTAAATTATGTATTTATACCTTCCACTGTTAAATCATTCAAAAATTAAACAAAA ATTGTTGTAATGCATTTCTTTGATTTCTTAAAATAGACAAAACGTTTATGTATACATTTTTGTTAAAAAC ATTTCTGTTTGTCTGCAACTTTCATTTGATAGCATTTTAATTCTACATTGCCCTTTTATTTTCATCTCAA TTTTTTTTGGGGGGTCTAACATTCTTCAAGCTCCTTTTCCCCCATTTTTGTACTTCATCTAGTAAGTGTA TTTGTTGTCTTTTCTTAGAAAATTGTTCAAATCCTTTAATGCTACACTTAAAAGAAGTAAGTCATCATCA TTATTTTTTATCTCTGCATATAGTCTGCATTTTGATGCTGCCTTATGTGTTTTCCAAATGTTCTTTTTGC TACATTTTTGTTATTTTCCACAGCAATACAGTCAGAAATGGATTTTGATTGAA
???blast.query.upload???
???blast.options???
???blast.eval???
???blast.eval.01???
???blast.eval.10???
???blast.eval.1???
???blast.eval.001???
???blast.eval.minus5???
???blast.eval.minus25???
???blast.eval.minus50???
???blast.eval.minus100???
???blast.numalign???
???blast.numalign.25???
???blast.numalign.1???
???blast.numalign.5???
???blast.numalign.50???
???blast.numalign.100???
???blast.wordsize???
???blast.wordsize.default???
???blast.wordsize.2???
???blast.wordsize.3???
???blast.wordsize.4???
???blast.wordsize.5???
???blast.wordsize.6???
???blast.wordsize.7???
???blast.wordsize.8???
???blast.wordsize.9???
???blast.wordsize.10???
???blast.wordsize.11???
???blast.wordsize.12???
???blast.wordsize.13???
???blast.wordsize.14???
???blast.wordsize.15???
???blast.wordsize.default.message???
???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
???blast.filtering???
???blast.on???
???blast.off???
BLAST time is limited to 30 seconds