Click here to close
Hello! We notice that you are using Internet Explorer, which is not supported by Echinobase and may cause the site to display incorrectly. We suggest using a current version of
Chrome
,
FireFox
, or
Safari
.
Echinobase
???banner.login???
???banner.register???
Contact Us
Cite Echinobase
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
BLAST
Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
JBrowse2 Tracks
Genes
Gene Search
Gene Search Tips
Gene Nomenclature Guidelines
Gene Name Questions
Expression
Search Anatomy Items
Quantitative Expression Datasets and Plotting Tools
Anatomy & Development
Search Diseases
Echinobase Anatomical Ontology (ECAO)
L. variegatus
Atlas of Development (pdf)
Resources
Protocols, Reagents and Data on EchinoWiki
Resource for Developmental Regulatory Genomics
Davidson Lab Gene Regulatory Networks
Libraries, Vectors and Screening
BAC Table
???header.navigation.searchAntibodies???
???header.navigation.searchMorpholinos???
Guide RNAs (gRNA)
Cis-Regulatory Elements (CREs)
Literature
Papers
Books
Cite Echinobase
Community
Find People
Find a Lab
Organizations
Job Postings
Downloads
Data Download
Gene Page Reports
Browse Download Site
BLAST Databases
???blast.header???
Download BLAST databases
???blast.alignment???
???blast.program.blastn???
???blast.program.blastp???
???blast.program.blastx???
???blast.program.tblastx???
???blast.program.tblastn???
???blast.database???
-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_030973201.1 PREDICTED: Strongylocentrotus purpuratus urea-proton symporter DUR3 (LOC574974), mRNA GGAGAGATTGGTATATGGGTCGTGTTGATAATTTATAATCACTTTATTTGGAATTCGATCACCGTTCATT GACTGTACTTTTAATTGGGTCTCCTGGGGAGCTAATGAAATAAACACTCTAACGAATGGCATAAGTCACT TCACCCGTTTTGTGTGAACCATTTAGATGTGACATGGTGATTTGTTAATTGAAGGAGAAAATAAAAAATC GTCGACGACGCGCACTCGACTACAGAACTGTAGAAGGCTTCGTGTCATAATGTTCATTTTTCACGTATCA TCGTAAGAAAGATCGCACGAACTATATTATAATGAAGCTGGACAACCCAGCAATTGTCCAATAGGTGATG AGATGACTGGATGGTCGTCATGACAACAAAATTAGTATACGTCATACACGTCCAATGAGAAACTATGTTT CTTCTCCCCACGAAACGCCTGCTCATACTTATTATGTTGGCGTTCAACGAAAGCAGATTGCAATCTGAAA CTCAACGCTTTCTTGGGGGGACGCAATAACTCTCTAAACAGCTCCTGCATTTCACGAAGGTCTTTTTGAA GAGTTCCGAACATTTTTATCTTGAAAAGAATATTGTTTTTGCGGAGACTGACAACGTATGCCGGCATATT TTTTGGTGTTAATTCATGATCATCGTTCTTGTTTTCCAAACTTCGTAGACGCAGAAGCGGAAAAGAATAC CCAAATCGTGAGGTTCTTGCAAACAACATTGACTTGGAATGTAAACAGTTAAAGTGAAGAATATCCGACC TTACGTTCTCAGTAAAACGCAGTTAACAATGGAGACAGCTAGATGAGACAAATCAGATTTAAATTATTTA TCTAGACGCTTTCTTACAACTTACTATCTTTACCTTTGTAATTTACGTGATAGTTCAACATCTACTGTAG ATCGGGTTGAACAAAAATCCAGATCAGTCAGGCATGTATAAAGACCGGTGTCATGGCAAATTATTGTCAG GACTTTGGTACGGTCGGAGGACTGGCGATCCTTTTCTTGCCGTCGACCATGGCCACCTGTTCCGATTATA TAACCCTATTGCCGAGCAATAACACATCCCTGACCATAGATTCCAAATTAAGTCTACAGTCGGCGATCAT CATTCTCATATGCTTTGGAACTTTCGTCATCGTTCTCTCTTATCTCTTCAACGTCATTAGAAAATTCGTC TACCAAGACAAAACGATGTTGGATTTCAGTTTCGATGCAGGAGGACGAGTGTCCGTTGGTCTGACAGCGA CTACCATCGTATCACAGTGGACCTGGGCAGCTACCCTTCTCCAGTCATCTACTGTAGCTGCAAATAATGG AATCAGTGGGCCGTTCTGGTATGCAGCCGGTGCAACCATTCCTCTGCTGATGTTTGCAGCCCTCTCGGTG CAGATGAAGATCAGGGCACCCGGAGCAAAGACATTTCTTCAGGTCATCCAGGCTCGCTTCGGGAATCGGA CACACTTGGTGTTCTGTGCCTTCGCCATCATGACCAACATTATCGTCACTGCTATGCTCATGATGGGTGG TTGTGCAGTTCTCACATCTTTGGTGGACGGCTTGTCATTAGAAATGGCTGCTATGTGCTTGACGGTAATC ATCTGGGCAAGTACGGGGATCGGTGGGCTTGGGGCTACCTTTTACTTGTCCTATTTCAACACCACCATCA TCTTCATCATCATGACCATCTTCGTGCTCATCACGTACAACAACCTCGGCAGCCGGGACACAGTGCTCGG TACCATAGGTACTGTGTATGATTTATTGAACTGTACCGTGGGTCCTGAACGGAATCAAGACCGGAGTTAC CTCACCTTTGTCTCACCCAGTGGAATCATGTTTGGTGTCATCAACATTGTCGGTAACTTTGGAACTGTGT TTGTGGACCAGTCCTACTGGCAGAGTTCAGTAGCAGCCAAACCAAGGGAAGGGATGTGGGGATTCTTGAT TGGTGGTTTGGTCTGGTTTGCTATTCCTTTCACCTTTGCATCCACCATGGGTCTGGCCTACCTGGCACTC AGCGCCGACGCCGGTATGCATCTTCTCACACCAGACCAGATTGCTCAAGGTCTAGTTCCTCCAAGGATAG CCCAGGAGCTGATGGGCTGGAGCGGGGAGCTTTTAATTGTAATTTTGATTCTCTTGGCTGTGACAACAAC TGGGTCAGCAGAGGTCATGGCTATCACGTCCATCCTAGTATACGACTGCTACCAGATCCATCTCAAGCCT TTCAGACGCGTTGCCGATAGCAACGGCTGCATCCTCTGTGGCAAGTCACGTGGTCGGATGGCGTCACTGA GAGACCAGTGCGGTTGTCAGAGTATGACTGACTGTAAATGGTGTCACGCTGACGATAGGGCAAGAATTGA ACAGACCAATCGCGCACTGAAGCCTTCGTTCAAGTGTACTGTACATGGTACTTATCGCACTTACCTCGAG CTACTACAAGGCAAACGAAATTGGAGTCTTGTGTGGGTCTCTCTCTCCTTCGTTCCTCTCACGATCATTT TCAATTATCTACAGGTGAATCTCAATGCTGTCTACAATTTCATGGGGATTTTGATAGGCTCGTCCGTCAC GCCAATTATTTTGAGTATGTTTTGGACAAGGCTGACTGGCATGGCCATGATGATGGGCGCCACCATTGGC ATGGTATGCGGGTTGATCACGTGGGTCATCGCCGGCTCCATTCTAAATGGACAGTTAAACTTCAGTGTCT TCTTCGATAGTTCCTGGGAGAGTTTTGATGCGAACATGCTGATTGGTAACTGTGGATCCATCTTAACAGG AGCACTCATTACAGTGGTGGTAAGCCTCCTGACTAACCGTGGAGTGACAGAGGAAGAGAAGCATGAGATA TGGGAGAAGACACGAGACATTGACAACCCACTCTCACCATGGCCACATCACTACGTCAAAGAGTTTGGAG TTCCAGAGGGCAAGCTAGTTTATAACCGTCCCTCGCTACTTCAGATGTTAAGTGAGTTCCGTCGTGCAAA CCTCATTGCCATCATCTCTGGGTTGAGCTTCACTTTCATTCTCGCAGTCCTCTGGCCAGTCATCATGAGC ACCATGGGAGTCCTCAACAAGAGCGAGTTCAGGTCCTGGATCTATCTCTGCGAAACTTGGGCCATCCTCG GCGGGGCGTTCATCATTTTCGTCCCCATCGTGACAGAGATACGAGAAATCGCGATGCGTTTGAAAGAGAA TAAGGACAGAATGATGGTCGGTCCTGAAGAAGAAAGGAACCCACCAGCACGCCGGGTGGGCCAGCCTTTG CCGCAGGGACCTAATGTTCGTCGGGTACCGACTATCAGCGGAGACACAGCACTTTCTTAAACGCTTGTTC ATATATGCCGCGGTAAACGGCGACGGTTTACTCCGGTTTTTTTTCTTGAGCGTACTGCTTTTCACCTTTT TGCATCTACAGTGCGTATAAAAAGTGCACACCAGGCATCAATAGCAGCTATCAATAATTGATTTGAATCA TCAATTTCGCTTTAGTCTTGTCTTACATCTGCAGTCGTGCAACACTCATCTCCCCCCCC
???blast.query.upload???
???blast.options???
???blast.eval???
???blast.eval.01???
???blast.eval.10???
???blast.eval.1???
???blast.eval.001???
???blast.eval.minus5???
???blast.eval.minus25???
???blast.eval.minus50???
???blast.eval.minus100???
???blast.numalign???
???blast.numalign.25???
???blast.numalign.1???
???blast.numalign.5???
???blast.numalign.50???
???blast.numalign.100???
???blast.wordsize???
???blast.wordsize.default???
???blast.wordsize.2???
???blast.wordsize.3???
???blast.wordsize.4???
???blast.wordsize.5???
???blast.wordsize.6???
???blast.wordsize.7???
???blast.wordsize.8???
???blast.wordsize.9???
???blast.wordsize.10???
???blast.wordsize.11???
???blast.wordsize.12???
???blast.wordsize.13???
???blast.wordsize.14???
???blast.wordsize.15???
???blast.wordsize.default.message???
???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
???blast.filtering???
???blast.on???
???blast.off???
BLAST time is limited to 30 seconds