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Echinobase
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Echinobase Accession
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Echinoderm mRNA
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S. purpuratus
(Purple sea urchin) 5.0
L. variegatus
(Green sea urchin) 3.0
P. miniata
(Bat star) 3.0
A. planci
(Crown-of-thorns) 1.0
L. pictus
(Painted urchin) 3.0
A. rubens
(Sugar star) 1.3
A. japonica
(Feather star) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus
(Purple sea urchin) 5.0
L. variegatus
(Green sea urchin) 3.0
P. miniata
(Bat star) 3.0
A. planci
(Crown-of-thorns) 1.0
L. pictus
(Painted urchin) 3.0
A. rubens
(Sugar star) 1.3
A. japonica
(Feather star) 1.0
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BLAST Databases
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Download BLAST databases
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 3.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_038211054.1 PREDICTED: Patiria miniata RNA binding protein fox-1 homolog 3-like (LOC119737003), transcript variant X2, mRNA TCCATAGTCAGTGCCCTGTCCTTGCTTCGGCATTTTCAGAGGCAGCTGCCCTAGGACCAAGCTTGCACAG CGTTCCCTAACATTTTTTAATTTCATATGCGGTGGGGAAAAAAGGTTCACTTCACATTAAAAAAAAATGC CAGCAGCTGTGAAAATTTGAGCATTGTACTCAAAAATCTACCGTCATCATTACATTCCTAGGAGGAACAT GGAATTAAAAAAAACTGCCGGAAAAGGAGCCTAATATTACCAGACCGTGAAGGGCCACCTCCGTCCACAA TCATCAACTGTCCACAGTCATCATCTCTCGTGGATGAGACGTAAACCAAGTTTGAAATACAAGACTCCAA AAGACACTTTGTTTTTCTCCCTCTCCGGCTGATGCTCTGCAAACGGTTAAAACCGCGCCTCGCTAATCAG AATCCACAGATTTCTCGGAGTCTAATTTGTAACGGATACCTTGATCTGGGAAAAAATACAATCATTGTAG AGAAGCGCTCGACTGGGAAAACTGTGTGTACAGCTAGGACAGTAGGACATCAATTACTCTACGTAGAGGC ACATCGGCAGAGCCAAATTATCCGAGTGGATCTTTCTCGTGCAGTGATGAGTCCAACACTGCTTACTGAT ACTTAGAGGATCCTTCGGGTTTCGTTACTCACAAGATGATGCTCAACGCGCCTCCCCCTCCCATGGCCCA GCAGTTTCCCCCTCAGTTTTCTCAAGTCCCGCCCCCTACTTCCCAGATTGTCTACTGTGCGCACTGTCCG CCCAATGGACTCGGCGGGACATTCCAGCCGGTGTTCAGCTCCCAGCAGCCACAGAAACCCATGCAGCATC CGATGCCCGCCATGGCAGGCCAACACCAACTCCCCGGCCAGTTGGCCGCCCAGATGCCGGGCCAGCTCCC CGCTGGTCCCTACCAGCAGCAGCAGCCCCAGTTTGCCCAGAACGGCCTGGAGGGTTACCAGCAGGCGCCC CAGATCCAGCCCCAGTACACCGCCACCGTTGTGCCCCAGCCAGCCGACGTGCCGGCCGTTTACACCCAAC CCCAGGAGGGACCGGGTCCCCAGCCCGTCTACAGCCAGCCCCAGCCCTCGGGGGAAGGGGCTGCAGTGGG GTTCGTTCAGGGACCGCCGCCCACTGTCAGCGGGGAGCAAGCCGGGGCCACGCCCACATTCAGCCAGGTA CTGGTCAGGAATTACGGTGAGCAAGTACAGACATCACAAGCGCCCCCAACGGGGGAGGTGGGCCAGGCCG TCGTGCCGGCGTTACCCGCCGCCAAGCCTGGCGAATCGCCCAAGAGGCTTCATGTATCAAATATCCCATT CAGGTTCAGGGATCCAGACTTGAGGGTCCTTTTCGGGCCCTTTGGTCCCATCATCGATGTAGAAATCATC TTCAATGAGCGGGGGTCAAAGGGATTCGGTTTTGTAACTTTCCAAAATAGTTCGGACGCCGACAGGGCAC GAGAGAAATTGAACGGCTCAATTGTTGAGGGGCGCAAAATTGAGGTGAACAATGCAACAGCGCGGGTCAT GACGAACAAGACACCTAAGTCAATTACTGGTACCGAACTGCTAAGCACTGTGGAGCTGCCGATTTTCCCA GCCGGTGCTCTCAGGGCGCCAGCGATAGGCAGAGGGCGGGCCACGAGAGGCGCGTACACTGCCTACCGAA TTGCTGCCCCGCCCCCCGTGGCTGGCTACACGACGGCCACGGCCATCTACCCAGAGGCATTCTACCCAGA GAGATATCAGACTGACCTTCTCTTGCAGAGCGCGGCGGCTGGATACGGAGGCTACATCAGCCGATACGCG GCCACGCCCACGGCCTACGCCATCCCGTACGGCCGGGAGTACACAGCTGACCCGTACCACCCGACGATCG GCCCCACGGCAACGGCGTATGGGGTAAGATACCCCTCCTTGACGACAAGGACAGGTATTTACAGAGGAGG CTACGCCCGCTACACGCCATACTAAACAAACAAACAAACACCAAGAACTGTGCTGCCAATTAAATTATAC AGAACAACTCTTCTTATTATGTTAAGAACGTTTAAACTGCCTGTAAAGTAAGAATCTGACACTTTTAAAA CGCGTGCTGCACCTTGGTCAAGAAAACCGCTGTGACAATCGGATGGGTAGGCATTTGTGCTGGACGCCAG CTCTTCAGGGTACCGGCTGGCTTGATGAGATGGCCAGTGTTGTCTGGGAACCAGTTGTGCCAGACTGGGC CCCCGACTCCCTTCATAAGAATTCTGCTGGGGAATTTCAGAGTACCAGCCATGCATCACCGGTGACATGA CCATGTATAGTGTTACTGCTTGAGAATGTCATGAGTACCAGCTGTTTCACTGGTTAGCTGTTGAAGGAGT AACAGAAGCTTGCTCGGTCAAGTAGGAAACTGCCAGACTGGACTCAATTGGTAATTGTAACATCTCAAAT TTTGGGTCAAGTTGACACCCAAAGATCAATGAAAGGACCAACATTCAAAAGGATCTTCTGTAAGATTGTA GATTTGTCCAAAAAAAAAGTCATAGTGTACTGTATTGATGCACAGGTTTTTCTGTAAAGTCCATGTTTGA TGTTAGAGTTACCGAATGGACAGTAAATAGGTGCAGGGAAGATGTCTACTTTACAAAGAAACTTTGTAGA GATCCCCAAATTTTACAAAAAGGATTTTAGTTTTTGAAGCCAACTCAAACAAACTGCGAAAAAAACAATC AAATAATAATGTAAAGAAAGTTATATAAGAATGCGAAAACAAATCAAAGTCTTTTAAGACAGCTCACTTG AACTCATTCAGAGATGAATCATATAGGTTGTTCTTTACTAACATGTAATACGAAGACAACTCATTATTCC CACAGGGTAATCTGGTAAAGTACGCAGAATTGTATTTTTTTGTTCTACAACCGTCATACAAAAGCAGCTA ACAAAATATACTAACAGGGTGAACTGACTTCAAGGTATTTGCCATGTATTCTCTTGTAAATTCAAATCAA AAAAAAAAAAAAAAATACCAAAGGACTATTTCATAAGCGTGCACTTTTAACTGTATTGCAACCATAATGC TGTTTTGGTCTCATGCCTAATGTACATGTAGGCTGATACCTATAACTTTGTGACCATATTTGATGGTATT TTCATAAAGCCCTCGGGGAACCAGACAAATGTGTCACCAGTTGAAGTCTTTGTTGGCAGTATTGCTTTTG GCTGGTATCCTGTAAGGTTTTGCTAACTGAATTTGCCAAGTGGGATATCTTGCTCAACAGTTGCTTATTG GTTGCATTAAATCCATTTGTTTTAAGATGAGAGGCCCACAATAATCCAATCCTTGTGGCCAAACAGATAA AAAAAAATTAAATCAAAATCCTTTAATTTGGTTTGTTCATTGCGAAATTTATGGAAAGTGACCAACACAA ATGTTTACAGTGTTGCTCACTCCAAAATAAATACATGTATCAATTTAATTTTCCTTTACCATTCAGAAAA AAAAGCTTCACTGTCAATAAAAAGTGCAAAATGCCTCAATTGTAAACAAAAAAAGTGTCTTAAGCAGATT CAATGCCGTCAATGGGCATTCTTAAGCCGAGATATTCTCCATGTAACCAGCTTATGAAGAAAATGAAATA TTTTTGGGATAGACACAAAAAACAGGTGTTTTTGAACAATGTTATACTTGAACAACATGCACAGTGTGGT ATTCTTCCATGCACGCAAGTGGACACAGGCTTTTTACGGCTTGTCTCGTTTTTGTACATAAAACCTTAAA AAAGCAAGTAGTGCTCCAGAAGATTAGGTAACTTTCGAGTTTTAGTGGCAATATTTTGCTAACTGCTAGT TTTTAATCAGTATTTTTTCTGTCATTTTATTTGCAAACAGTGCAGGAATTTGTACCACATTCCTGGCCAC GTTTGAACTTTTTTTCCTGTCTTCAAAAAGTCTTGCATGTAGTATTTTATTCCTTATGATAGACCTTTAT TTATTCAGACACATTGTTACGTGCTAAATGTGGTGCTATAATTTCAGGGTTGATGTATTAAAAAGGGGAA CAGTTTTTTTTTTAAAGTGTGCTATGAACCCAGTACACATCCGAAGGAAATTGCTCAAGTTTAGCCAATC AGATTCTGTATGAATATTCAGTGCCTCGTGCTACCACACGATTGGATGGGCATTTAATCTCTTTTGGTAA TCTTCAACCAATCAGAAATCAGCAGCCGTTTAACAAGGATAGAACAGCACTTTTGATTGGCTCGTTACGG TGGTTTTTTTTTTCAGAGTCGAGGAAAGTCTCACTTCTAGTAAAGAGCAACAAACAACAGTTCTTTGCTG TTTTGAGTAAAAGATGTTTTTAATCGGGCTGCGATTTTTAATTTTCACCTTTGGTCGAACAGTTCCTATA CAAACAGATATACTGCCACGGACATCACAGCAGAGAGTATGATAGCTATCATTTGTTTTGATTTTGTTTC TTCTTTTTTAAGTAAATATTGTTATTTAACACATTGAAAGTGTGCATCCTTTATATTCTAGGCTAAGACG CTTGCCCGTAAATATTAAACACTTGTATAGAACTGACAGCAGCACTCTCATTAAATATTGTGCTGTTGCA TTTCTTCCAGTTTACATGTATTATTGCATATAAACTATTTATTTATTTCTGTAAACATGTCCATTTGAAC ACTGTACAGTCGTTAAACTCCTTTTTTTTTGGTGTCTTTTGCCGCAAGTCTGAAAATGGCACAGTATTAA ATAAAAACGTTTTTAATAATGGACACAAGAACATGAGACCCTTGTTTAACGATACATTTATATTTATTGT TCAATATATTGAATTTATTGAAACGTGTCTATTGTAGCCTGTATAGATTAAGAAAAAAACAAAAAACAGT TTAATTGAGTGCAATGGTTTACCCCCTGGTAATCCAATGGCCTGAGTATTGTTAGATGTTGGTGTTTTAT CTAATGGTGTAGAAAACCATTGTACAGTGTGCTATTATATCGTGCCCTCCACAAATGGCAAGGGCATGTT TACTTTTTTTTGATGCCCTGTCTGTTTTTTGTTGTTGCTTTTCTGTTATTCGTTATATTTTAAAAGTTTT GCTGTTGTCATGGGTATCTGGGAGTAGTTGATGCCACTGAGTTTTACAAGATTTGATGAACAAGAATAAC TTTTTTTAGTGCTATAATACAGTTTTGCTTTTAGTGAAACACAAAACAATTTTAAAGACTGGAATATTGT TATTCTTATATTGCCATTATATTACATGTAGTCACTATTTCTTTCCTTTGTCTTTTGAAAATCTTCATTT ACTTTCAGCGAATGTTTTGTTATCTTAGGTTTTCCCTCATGTTACAAGTTCATTTTTTAAACATTTATTT ATGCAGCTCTTTACAAGTTGTACCATTTTGTCTCGGTAGTTATTTGAAGTAGATAGTGTTTTAAGTTGGC ATATCTCATTCTTATTTGGAAAATTCATGCAAAAGTGCACTCAAAATCACTGGGGAAAATAATTTGACAA AAAAGAGAAAGGTTTAGTAACAAATAATTAAACATACAGCAATTGGCCAATCAATCAGATAGTTTGTCTT TTCAATCCAGCCATACTTGACCAATCGTGTGCCCTGTTCTAGCAGGCCTGTGAAGTTGATTGGCTGTCTG GATTTGTATATTTGAATTTCACAGTATGCAACAGTCATGAAAATGTAGACGACTTGTTTTGTTTTGGTGT TTTTCTGGCATTTGGTTTTGTTTCTTTTGCACTATAATGATTAAATTTGCAACTGTGCTAGTAGGAAGGG TTTTTTTTTTTTATTTTCCTTTGAGATATCATTTATCCAGTCTCTGAAATTGTCTTTTTTTTAACACTAT GTGTGCTATTTCACAGGTAAGAAGATAGTTTAGTAGAGTTTACTGAATACCCTCACTGTTAAACTCGATA TGATATTCAAGCAAAAACTGTGGGTAGATTTTGTAATGGTTTCACGGCTTTGCGCCTAGTATGTATCAAA TAGGGTTTTGGTGAATGGTATATGTATAAATGCCGCTTATACCATTTAAACAAACAGTCGCAGATTATCA GGTCCAAATACAATGTATGTGTAACCTAACAAGTAAATAGACTACGCATAGTTGAATATTTCACCGCATT AGTATGGTTAGCAACAGTTATACCAAAAAGGGTTGACTTTTGTTTGTGTGCATTACAACCTCTTTACCAA GGCACAAATAGTGAGATATTTTTCTGAAGTAAAAGCCTTGAATCTTTTGGATGACTCCATTTTTCCTGTT AGTGTTTAAAATAAACTGTACCAAGATTTGTATTTTGGGGTTTTTGTTTTTTTTAAGGGGAAAA
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???blast.matrix???
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???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
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BLAST time is limited to 30 seconds