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Echinobase
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Echinobase Accession
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Echinoderm mRNA
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S. purpuratus
(Purple sea urchin) 5.0
L. variegatus
(Green sea urchin) 3.0
P. miniata
(Bat star) 3.0
A. planci
(Crown-of-thorns) 1.0
L. pictus
(Painted urchin) 3.0
A. rubens
(Sugar star) 1.3
A. japonica
(Feather star) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus
(Purple sea urchin) 5.0
L. variegatus
(Green sea urchin) 3.0
P. miniata
(Bat star) 3.0
A. planci
(Crown-of-thorns) 1.0
L. pictus
(Painted urchin) 3.0
A. rubens
(Sugar star) 1.3
A. japonica
(Feather star) 1.0
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L. variegatus
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BLAST Databases
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Download BLAST databases
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 3.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_038211059.1 PREDICTED: Patiria miniata RNA binding protein fox-1 homolog 3-like (LOC119737003), transcript variant X7, mRNA ATTCCATAGTCAGTGCCCTGTCCTTGCTTCGGCATTTTCAGAGGCAGCTGCCCTAGGACCAAGCTTGCAC AGCGTTCCCTAACATTTTTTAATTTCATATGCGGTGGGGAAAAAAGGTTCACTTCACATTAAAAAAAAAT GCCAGCAGCTGTGAAAATTTGAGCATTGTACTCAAAAATCTACCGTCATCATTACATTCCTAGGAGGAAC ATGGAATTAAAAAAAACTGCCGGAAAAGGAGCCTAATATTACCAGACCGTGAAGGGCCACCTCCGTCCAC AATCATCAACTGTCCACAGTCATCATCTCTCGTGGATGAGACGTAAACCAAGTTTGAAATACAAGACTCC AAAAGACACTTTGTTTTTCTCCCTCTCCGGCTGATGCTCTGCAAACGGTTAAAACCGCGCCTCGCTAATC AGAATCCACAGATTTCTCGGAGTCTAATTTGTAACGGATACCTTGATCTGGGAAAAAATACAATCATTGT AGAGAAGCGCTCGACTGGGAAAACTGTGTGTACAGCTAGGACAGTAGGACATCAATTACTCTACGTAGAG GCACATCGGCAGAGCCAAATTATCCGAGTGGATCTTTCTCGTGCAGTGATGAGTCCAACACTGCTTACTG ATACTTAGAGGATCCTTCGGGTTTCGTTACTCACAAGATGATGCTCAACGCGCCTCCCCCTCCCATGGCC CAGCAGTTTCCCCCTCAGTTTTCTCAAGTCCCGCCCCCTACTTCCCAGATTGTCTACTGTGCGCACTGTC CGCCCAATGGACTCGGCGGGACATTCCAGCCGGTGTTCAGCTCCCAGCAGCCACAGAAACCCATGCAGCA TCCGATGCCCGCCATGGCAGGCCAACACCAACTCCCCGGCCAGTTGGCCGCCCAGATGCCGGGCCAGCTC CCCGCTGGTCCCTACCAGCAGCAGCAGCCCCAGTTTGCCCAGAACGGCCTGGAGGGTTACCAGCAGGCGC CCCAGATCCAGCCCCAGTACACCGCCACCGTTGTGCCCCAGCCAGCCGACGTGCCGGCCGTTTACACCCA ACCCCAGGAGGGACCGGGTCCCCAGCCCGTCTACAGCCAGCCCCAGCCCTCGGGGGAAGGGGCTGCAGTG GGGTTCGTTCAGGGACCGCCGCCCACTGTCAGCGGGGAGCAAGCCGGGGCCACGCCCACATTCAGCCAGG TACTGGTCAGGAATTACGGTGAGCAAGTACAGACATCACAAGCGCCCCCAACGGGGGAGGTGGGCCAGGC CGTCGTGCCGGCGTTACCCGCCGCCAAGCCTGGCGAATCGCCCAAGAGGCTTCATGTATCAAATATCCCA TTCAGGTTCAGGGATCCAGACTTGAGGGTCCTTTTCGGGCCCTTTGGTCCCATCATCGATGTAGAAATCA TCTTCAATGAGCGGGGGTCAAAGGTGAACAATGCAACAGCGCGGGTCATGACGAACAAGACACCTAAGTC AATTACTGGTACCGAACTGCTAAGCACTGTGGAGCTGCCGATTTTCCCAGCCGGTGCTCTCAGGGCGCCA GCGATAGGCAGAGGGCGGGCCACGAGAGGCGCGTACACTGCCTACCGAATTGCTGCCCCGCCCCCCGTGG CTGGCTACACGACGGCCACGGCCATCTACCCAGAGGCATTCTACCCAGAGAGATATCAGACTGACCTTCT CTTGCAGAGCGCGGCGGCTGGATACGGAGGCTACATCAGCCGATACGCGGCCACGCCCACGGCCTACGCC ATCCCGTACGGCCGGGAGTACACAGCTGACCCGTACCACCCGACGATCGGCCCCACGGCAACGGCGTATG GGGTAAGATACCCCTCCTTGACGACAAGGCAGACAGGTATTTACAGAGGAGGCTACGCCCGCTACACGCC ATACTAAACAAACAAACAAACACCAAGAACTGTGCTGCCAATTAAATTATACAGAACAACTCTTCTTATT ATGTTAAGAACGTTTAAACTGCCTGTAAAGTAAGAATCTGACACTTTTAAAACGCGTGCTGCACCTTGGT CAAGAAAACCGCTGTGACAATCGGATGGGTAGGCATTTGTGCTGGACGCCAGCTCTTCAGGGTACCGGCT GGCTTGATGAGATGGCCAGTGTTGTCTGGGAACCAGTTGTGCCAGACTGGGCCCCCGACTCCCTTCATAA GAATTCTGCTGGGGAATTTCAGAGTACCAGCCATGCATCACCGGTGACATGACCATGTATAGTGTTACTG CTTGAGAATGTCATGAGTACCAGCTGTTTCACTGGTTAGCTGTTGAAGGAGTAACAGAAGCTTGCTCGGT CAAGTAGGAAACTGCCAGACTGGACTCAATTGGTAATTGTAACATCTCAAATTTTGGGTCAAGTTGACAC CCAAAGATCAATGAAAGGACCAACATTCAAAAGGATCTTCTGTAAGATTGTAGATTTGTCCAAAAAAAAA GTCATAGTGTACTGTATTGATGCACAGGTTTTTCTGTAAAGTCCATGTTTGATGTTAGAGTTACCGAATG GACAGTAAATAGGTGCAGGGAAGATGTCTACTTTACAAAGAAACTTTGTAGAGATCCCCAAATTTTACAA AAAGGATTTTAGTTTTTGAAGCCAACTCAAACAAACTGCGAAAAAAACAATCAAATAATAATGTAAAGAA AGTTATATAAGAATGCGAAAACAAATCAAAGTCTTTTAAGACAGCTCACTTGAACTCATTCAGAGATGAA TCATATAGGTTGTTCTTTACTAACATGTAATACGAAGACAACTCATTATTCCCACAGGGTAATCTGGTAA AGTACGCAGAATTGTATTTTTTTGTTCTACAACCGTCATACAAAAGCAGCTAACAAAATATACTAACAGG GTGAACTGACTTCAAGGTATTTGCCATGTATTCTCTTGTAAATTCAAATCAAAAAAAAAAAAAAAAATAC CAAAGGACTATTTCATAAGCGTGCACTTTTAACTGTATTGCAACCATAATGCTGTTTTGGTCTCATGCCT AATGTACATGTAGGCTGATACCTATAACTTTGTGACCATATTTGATGGTATTTTCATAAAGCCCTCGGGG AACCAGACAAATGTGTCACCAGTTGAAGTCTTTGTTGGCAGTATTGCTTTTGGCTGGTATCCTGTAAGGT TTTGCTAACTGAATTTGCCAAGTGGGATATCTTGCTCAACAGTTGCTTATTGGTTGCATTAAATCCATTT GTTTTAAGATGAGAGGCCCACAATAATCCAATCCTTGTGGCCAAACAGATAAAAAAAAATTAAATCAAAA TCCTTTAATTTGGTTTGTTCATTGCGAAATTTATGGAAAGTGACCAACACAAATGTTTACAGTGTTGCTC ACTCCAAAATAAATACATGTATCAATTTAATTTTCCTTTACCATTCAGAAAAAAAAGCTTCACTGTCAAT AAAAAGTGCAAAATGCCTCAATTGTAAACAAAAAAAGTGTCTTAAGCAGATTCAATGCCGTCAATGGGCA TTCTTAAGCCGAGATATTCTCCATGTAACCAGCTTATGAAGAAAATGAAATATTTTTGGGATAGACACAA AAAACAGGTGTTTTTGAACAATGTTATACTTGAACAACATGCACAGTGTGGTATTCTTCCATGCACGCAA GTGGACACAGGCTTTTTACGGCTTGTCTCGTTTTTGTACATAAAACCTTAAAAAAGCAAGTAGTGCTCCA GAAGATTAGGTAACTTTCGAGTTTTAGTGGCAATATTTTGCTAACTGCTAGTTTTTAATCAGTATTTTTT CTGTCATTTTATTTGCAAACAGTGCAGGAATTTGTACCACATTCCTGGCCACGTTTGAACTTTTTTTCCT GTCTTCAAAAAGTCTTGCATGTAGTATTTTATTCCTTATGATAGACCTTTATTTATTCAGACACATTGTT ACGTGCTAAATGTGGTGCTATAATTTCAGGGTTGATGTATTAAAAAGGGGAACAGTTTTTTTTTTAAAGT GTGCTATGAACCCAGTACACATCCGAAGGAAATTGCTCAAGTTTAGCCAATCAGATTCTGTATGAATATT CAGTGCCTCGTGCTACCACACGATTGGATGGGCATTTAATCTCTTTTGGTAATCTTCAACCAATCAGAAA TCAGCAGCCGTTTAACAAGGATAGAACAGCACTTTTGATTGGCTCGTTACGGTGGTTTTTTTTTTCAGAG TCGAGGAAAGTCTCACTTCTAGTAAAGAGCAACAAACAACAGTTCTTTGCTGTTTTGAGTAAAAGATGTT TTTAATCGGGCTGCGATTTTTAATTTTCACCTTTGGTCGAACAGTTCCTATACAAACAGATATACTGCCA CGGACATCACAGCAGAGAGTATGATAGCTATCATTTGTTTTGATTTTGTTTCTTCTTTTTTAAGTAAATA TTGTTATTTAACACATTGAAAGTGTGCATCCTTTATATTCTAGGCTAAGACGCTTGCCCGTAAATATTAA ACACTTGTATAGAACTGACAGCAGCACTCTCATTAAATATTGTGCTGTTGCATTTCTTCCAGTTTACATG TATTATTGCATATAAACTATTTATTTATTTCTGTAAACATGTCCATTTGAACACTGTACAGTCGTTAAAC TCCTTTTTTTTTGGTGTCTTTTGCCGCAAGTCTGAAAATGGCACAGTATTAAATAAAAACGTTTTTAATA ATGGACACAAGAACATGAGACCCTTGTTTAACGATACATTTATATTTATTGTTCAATATATTGAATTTAT TGAAACGTGTCTATTGTAGCCTGTATAGATTAAGAAAAAAACAAAAAACAGTTTAATTGAGTGCAATGGT TTACCCCCTGGTAATCCAATGGCCTGAGTATTGTTAGATGTTGGTGTTTTATCTAATGGTGTAGAAAACC ATTGTACAGTGTGCTATTATATCGTGCCCTCCACAAATGGCAAGGGCATGTTTACTTTTTTTTGATGCCC TGTCTGTTTTTTGTTGTTGCTTTTCTGTTATTCGTTATATTTTAAAAGTTTTGCTGTTGTCATGGGTATC TGGGAGTAGTTGATGCCACTGAGTTTTACAAGATTTGATGAACAAGAATAACTTTTTTTAGTGCTATAAT ACAGTTTTGCTTTTAGTGAAACACAAAACAATTTTAAAGACTGGAATATTGTTATTCTTATATTGCCATT ATATTACATGTAGTCACTATTTCTTTCCTTTGTCTTTTGAAAATCTTCATTTACTTTCAGCGAATGTTTT GTTATCTTAGGTTTTCCCTCATGTTACAAGTTCATTTTTTAAACATTTATTTATGCAGCTCTTTACAAGT TGTACCATTTTGTCTCGGTAGTTATTTGAAGTAGATAGTGTTTTAAGTTGGCATATCTCATTCTTATTTG GAAAATTCATGCAAAAGTGCACTCAAAATCACTGGGGAAAATAATTTGACAAAAAAGAGAAAGGTTTAGT AACAAATAATTAAACATACAGCAATTGGCCAATCAATCAGATAGTTTGTCTTTTCAATCCAGCCATACTT GACCAATCGTGTGCCCTGTTCTAGCAGGCCTGTGAAGTTGATTGGCTGTCTGGATTTGTATATTTGAATT TCACAGTATGCAACAGTCATGAAAATGTAGACGACTTGTTTTGTTTTGGTGTTTTTCTGGCATTTGGTTT TGTTTCTTTTGCACTATAATGATTAAATTTGCAACTGTGCTAGTAGGAAGGGTTTTTTTTTTTTATTTTC CTTTGAGATATCATTTATCCAGTCTCTGAAATTGTCTTTTTTTTAACACTATGTGTGCTATTTCACAGGT AAGAAGATAGTTTAGTAGAGTTTACTGAATACCCTCACTGTTAAACTCGATATGATATTCAAGCAAAAAC TGTGGGTAGATTTTGTAATGGTTTCACGGCTTTGCGCCTAGTATGTATCAAATAGGGTTTTGGTGAATGG TATATGTATAAATGCCGCTTATACCATTTAAACAAACAGTCGCAGATTATCAGGTCCAAATACAATGTAT GTGTAACCTAACAAGTAAATAGACTACGCATAGTTGAATATTTCACCGCATTAGTATGGTTAGCAACAGT TATACCAAAAAGGGTTGACTTTTGTTTGTGTGCATTACAACCTCTTTACCAAGGCACAAATAGTGAGATA TTTTTCTGAAGTAAAAGCCTTGAATCTTTTGGATGACTCCATTTTTCCTGTTAGTGTTTAAAATAAACTG TACCAAGATTTGTATTTTGGGGTTTTTGTTTTTTTTAAGGGGAAAA
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???blast.matrix???
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???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
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BLAST time is limited to 30 seconds