Papers associated with endoderm

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	Evolutionary plasticity of developmental gene regulatory network architecture., Hinman VF., Proc Natl Acad Sci U S A. December 4, 2007; 104 (49): 19404-9.
	Co-option and dissociation in larval origins and evolution: the sea urchin larval gut., Love AC., Evol Dev. January 1, 2008; 10 (1): 74-88.
	A conserved role for the nodal signaling pathway in the establishment of dorso-ventral and left-right axes in deuterostomes., Duboc V., J Exp Zool B Mol Dev Evol. January 15, 2008; 310 (1): 41-53.
	Embryonic pattern formation without morphogens., Bolouri H., Bioessays. May 1, 2008; 30 (5): 412-7.
	LvNumb works synergistically with Notch signaling to specify non-skeletal mesoderm cells in the sea urchin embryo., Range RC., Development. August 1, 2008; 135 (14): 2445-54.
	Gene regulatory network subcircuit controlling a dynamic spatial pattern of signaling in the sea urchin embryo., Smith J., Proc Natl Acad Sci U S A. December 23, 2008; 105 (51): 20089-94.
	Two ParaHox genes, SpLox and SpCdx, interact to partition the posterior endoderm in the formation of a functional gut., Cole AG., Development. February 1, 2009; 136 (4): 541-9.
	Gene regulatory network interactions in sea urchin endomesoderm induction., Sethi AJ., PLoS Biol. February 3, 2009; 7 (2): e1000029.
	Hedgehog signaling patterns mesoderm in the sea urchin., Walton KD., Dev Biol. July 1, 2009; 331 (1): 26-37.
	Blocking Dishevelled signaling in the noncanonical Wnt pathway in sea urchins disrupts endoderm formation and spiculogenesis, but not secondary mesoderm formation., Byrum CA., Dev Dyn. July 1, 2009; 238 (7): 1649-65.
	Monte Carlo analysis of an ODE Model of the Sea Urchin Endomesoderm Network., Kühn C., BMC Syst Biol. August 23, 2009; 3 83.
	FGFRL1 is a neglected putative actor of the FGF signalling pathway present in all major metazoan phyla., Bertrand S., BMC Evol Biol. September 9, 2009; 9 226.
	Suppressor of Hairless (Su(H)) is required for foregut development in the sea urchin embryo., Karasawa K., Zoolog Sci. October 1, 2009; 26 (10): 686-90.
	Dynamics of Delta/Notch signaling on endomesoderm segregation in the sea urchin embryo., Croce JC., Development. January 1, 2010; 137 (1): 83-91.
	Nodal and BMP2/4 pattern the mesoderm and endoderm during development of the sea urchin embryo., Duboc V., Development. January 1, 2010; 137 (2): 223-35.
	Distinct embryotoxic effects of lithium appeared in a new assessment model of the sea urchin: the whole embryo assay and the blastomere culture assay., Kiyomoto M., Ecotoxicology. March 1, 2010; 19 (3): 563-70.
	The endoderm gene regulatory network in sea urchin embryos up to mid-blastula stage., Peter IS., Dev Biol. April 15, 2010; 340 (2): 188-99.
	Information processing at the foxa node of the sea urchin endomesoderm specification network., de-Leon SB., Proc Natl Acad Sci U S A. June 1, 2010; 107 (22): 10103-8.
	Transcriptional increase and misexpression of 14-3-3 epsilon in sea urchin embryos exposed to UV-B., Russo R., Cell Stress Chaperones. November 1, 2010; 15 (6): 993-1001.
	Uncoupling of complex regulatory patterning during evolution of larval development in echinoderms., Yankura KA., BMC Biol. November 30, 2010; 8 143.
	Developmental expression of COE across the Metazoa supports a conserved role in neuronal cell-type specification and mesodermal development., Jackson DJ., Dev Genes Evol. December 1, 2010; 220 (7-8): 221-34.
	The control of foxN2/3 expression in sea urchin embryos and its function in the skeletogenic gene regulatory network., Rho HK., Development. March 1, 2011; 138 (5): 937-45.
	A gene regulatory network controlling the embryonic specification of endoderm., Peter IS., Nature. May 29, 2011; 474 (7353): 635-9.
	Direct development of neurons within foregut endoderm of sea urchin embryos., Wei Z., Proc Natl Acad Sci U S A. May 31, 2011; 108 (22): 9143-7.
	Regulative deployment of the skeletogenic gene regulatory network during sea urchin development., Sharma T., Development. June 1, 2011; 138 (12): 2581-90.
	Wnt6 activates endoderm in the sea urchin gene regulatory network., Croce J., Development. August 1, 2011; 138 (15): 3297-306.
	The conserved role and divergent regulation of foxa, a pan-eumetazoan developmental regulatory gene., de-Leon SB., Dev Biol. September 1, 2011; 357 (1): 21-6.
	Manganese interferes with calcium, perturbs ERK signaling, and produces embryos with no skeleton., Pinsino A., Toxicol Sci. September 1, 2011; 123 (1): 217-30.
	The protease degrading sperm histones post-fertilization in sea urchin eggs is a nuclear cathepsin L that is further required for embryo development., Morin V., PLoS One. January 1, 2012; 7 (11): e46850.
	Reciprocal signaling between the ectoderm and a mesendodermal left-right organizer directs left-right determination in the sea urchin embryo., Bessodes N., PLoS Genet. January 1, 2012; 8 (12): e1003121.
	Morphogenesis in sea urchin embryos: linking cellular events to gene regulatory network states., Lyons DC., Wiley Interdiscip Rev Dev Biol. January 1, 2012; 1 (2): 231-52.
	Stress response induced by carbon nanoparticles in Paracentrotus lividus., Carata E., Int J Mol Cell Med. January 1, 2012; 1 (1): 30-8.
	Frizzled1/2/7 signaling directs β-catenin nuclearisation and initiates endoderm specification in macromeres during sea urchin embryogenesis., Lhomond G., Development. February 1, 2012; 139 (4): 816-25.
	Sequential signaling crosstalk regulates endomesoderm segregation in sea urchin embryos., Sethi AJ., Science. February 3, 2012; 335 (6068): 590-3.
	A comprehensive analysis of Delta signaling in pre-gastrular sea urchin embryos., Materna SC., Dev Biol. April 1, 2012; 364 (1): 77-87.
	Axial patterning interactions in the sea urchin embryo: suppression of nodal by Wnt1 signaling., Wei Z., Development. May 1, 2012; 139 (9): 1662-9.
	Development of an embryonic skeletogenic mesenchyme lineage in a sea cucumber reveals the trajectory of change for the evolution of novel structures in echinoderms., McCauley BS., Evodevo. August 9, 2012; 3 (1): 17.
	Brachyury, Tbx2/3 and sall expression during embryogenesis of the indirectly developing polychaete Hydroides elegans., Arenas-Mena C., Int J Dev Biol. January 1, 2013; 57 (1): 73-83.
	FGF signaling induces mesoderm in the hemichordate Saccoglossus kowalevskii., Green SA., Development. March 1, 2013; 140 (5): 1024-33.
	Tissue-specificity and phylogenetics of Pl-MT mRNA during Paracentrotus lividus embryogenesis., Russo R., Gene. May 1, 2013; 519 (2): 305-10.
	Intact cluster and chordate-like expression of ParaHox genes in a sea star., Annunziata R., BMC Biol. June 27, 2013; 11 68.
	A shift in germ layer allocation is correlated with large egg size and facultative planktotrophy in the echinoid Clypeaster rosaceus., Zigler KS., Biol Bull. August 1, 2013; 224 (3): 192-9.
	A detailed description of the development of the hemichordate Saccoglossus kowalevskii using SEM, TEM, Histology and 3D-reconstructions., Kaul-Strehlow S., Front Zool. September 6, 2013; 10 (1): 53.
	Nuclearization of β-catenin in ectodermal precursors confers organizer-like ability to induce endomesoderm and pattern a pluteus larva., Byrum CA., Evodevo. November 4, 2013; 4 (1): 31.
	Expression of wnt and frizzled genes during early sea star development., McCauley BS., Gene Expr Patterns. December 1, 2013; 13 (8): 437-44.
	Short-range Wnt5 signaling initiates specification of sea urchin posterior ectoderm., McIntyre DC., Development. December 1, 2013; 140 (24): 4881-9.
	Cis-regulatory control of the nuclear receptor Coup-TF gene in the sea urchin Paracentrotus lividus embryo., Kalampoki LG., PLoS One. January 1, 2014; 9 (11): e109274.
	Pattern and process during sea urchin gut morphogenesis: the regulatory landscape., Annunziata R., Genesis. March 1, 2014; 52 (3): 251-68.
	Encoding regulatory state boundaries in the pregastrular oral ectoderm of the sea urchin embryo., Li E., Proc Natl Acad Sci U S A. March 11, 2014; 111 (10): E906-13.
	Molecular conservation of metazoan gut formation: evidence from expression of endomesoderm genes in Capitella teleta (Annelida)., Boyle MJ., Evodevo. June 17, 2014; 5 39.

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