Papers associated with vegetal hemisphere

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	The cis-regulatory system of the tbrain gene: Alternative use of multiple modules to promote skeletogenic expression in the sea urchin embryo., Wahl ME., Dev Biol. November 15, 2009; 335 (2): 428-41.
	Action at a distance during cytokinesis., von Dassow G., J Cell Biol. December 14, 2009; 187 (6): 831-45.
	The expression and distribution of Wnt and Wnt receptor mRNAs during early sea urchin development., Stamateris RE., Gene Expr Patterns. January 1, 2010; 10 (1): 60-4.
	Dynamics of Delta/Notch signaling on endomesoderm segregation in the sea urchin embryo., Croce JC., Development. January 1, 2010; 137 (1): 83-91.
	Nodal and BMP2/4 pattern the mesoderm and endoderm during development of the sea urchin embryo., Duboc V., Development. January 1, 2010; 137 (2): 223-35.
	[A "micromere model" of cellular interactions in sea urchin embryos]., Shmukler IuB., Biofizika. January 1, 2010; 55 (3): 451-9.
	Characterization and expression of a sea star otx ortholog (Protxβ1/2) in the larva of Patiriella regularis., Elia L., Gene Expr Patterns. January 1, 2010; 10 (7-8): 323-7.
	Nanos functions to maintain the fate of the small micromere lineage in the sea urchin embryo., Juliano CE., Dev Biol. January 15, 2010; 337 (2): 220-32.
	Embryonic, larval, and juvenile development of the sea biscuit Clypeaster subdepressus (Echinodermata: Clypeasteroida)., Vellutini BC., PLoS One. March 22, 2010; 5 (3): e9654.
	The endoderm gene regulatory network in sea urchin embryos up to mid-blastula stage., Peter IS., Dev Biol. April 15, 2010; 340 (2): 188-99.
	Information processing at the foxa node of the sea urchin endomesoderm specification network., de-Leon SB., Proc Natl Acad Sci U S A. June 1, 2010; 107 (22): 10103-8.
	Implication of HpEts in gene regulatory networks responsible for specification of sea urchin skeletogenic primary mesenchyme cells., Yajima M., Zoolog Sci. August 1, 2010; 27 (8): 638-46.
	Exogenous RNA is selectively retained in the small micromeres during sea urchin embryogenesis., Gustafson EA., Mol Reprod Dev. October 1, 2010; 77 (10): 836.
	Uncoupling of complex regulatory patterning during evolution of larval development in echinoderms., Yankura KA., BMC Biol. November 30, 2010; 8 143.
	Conserved early expression patterns of micromere specification genes in two echinoid species belonging to the orders clypeasteroida and echinoida., Yamazaki A., Dev Dyn. December 1, 2010; 239 (12): 3391-403.
	Developmental expression of COE across the Metazoa supports a conserved role in neuronal cell-type specification and mesodermal development., Jackson DJ., Dev Genes Evol. December 1, 2010; 220 (7-8): 221-34.
	Ancestral regulatory circuits governing ectoderm patterning downstream of Nodal and BMP2/4 revealed by gene regulatory network analysis in an echinoderm., Saudemont A., PLoS Genet. December 23, 2010; 6 (12): e1001259.
	Small micromeres contribute to the germline in the sea urchin., Yajima M., Development. January 1, 2011; 138 (2): 237-43.
	The echinoid mitotic gradient: effect of cell size on the micromere cleavage cycle., Duncan RE., Mol Reprod Dev. January 1, 2011; 78 (10-11): 868-78.
	Post-translational regulation by gustavus contributes to selective Vasa protein accumulation in multipotent cells during embryogenesis., Gustafson EA., Dev Biol. January 15, 2011; 349 (2): 440-50.
	The control of foxN2/3 expression in sea urchin embryos and its function in the skeletogenic gene regulatory network., Rho HK., Development. March 1, 2011; 138 (5): 937-45.
	A gene regulatory network controlling the embryonic specification of endoderm., Peter IS., Nature. May 29, 2011; 474 (7353): 635-9.
	Regulative deployment of the skeletogenic gene regulatory network during sea urchin development., Sharma T., Development. June 1, 2011; 138 (12): 2581-90.
	Atypical protein kinase C controls sea urchin ciliogenesis., Prulière G., Mol Biol Cell. June 15, 2011; 22 (12): 2042-53.
	Wnt6 activates endoderm in the sea urchin gene regulatory network., Croce J., Development. August 1, 2011; 138 (15): 3297-306.
	Precise cis-regulatory control of spatial and temporal expression of the alx-1 gene in the skeletogenic lineage of s. purpuratus., Damle S., Dev Biol. September 15, 2011; 357 (2): 505-17.
	Opposing nodal and BMP signals regulate left-right asymmetry in the sea urchin larva., Luo YJ., PLoS Biol. January 1, 2012; 10 (10): e1001402.
	Left-right asymmetry in the sea urchin embryo: BMP and the asymmetrical origins of the adult., Warner JF., PLoS Biol. January 1, 2012; 10 (10): e1001404.
	Reciprocal signaling between the ectoderm and a mesendodermal left-right organizer directs left-right determination in the sea urchin embryo., Bessodes N., PLoS Genet. January 1, 2012; 8 (12): e1003121.
	Synthetic in vivo validation of gene network circuitry., Damle SS., Proc Natl Acad Sci U S A. January 31, 2012; 109 (5): 1548-53.
	Programmed reduction of ABC transporter activity in sea urchin germline progenitors., Campanale JP., Development. February 1, 2012; 139 (4): 783-92.
	Frizzled1/2/7 signaling directs β-catenin nuclearisation and initiates endoderm specification in macromeres during sea urchin embryogenesis., Lhomond G., Development. February 1, 2012; 139 (4): 816-25.
	Sequential signaling crosstalk regulates endomesoderm segregation in sea urchin embryos., Sethi AJ., Science. February 3, 2012; 335 (6068): 590-3.
	A comprehensive analysis of Delta signaling in pre-gastrular sea urchin embryos., Materna SC., Dev Biol. April 1, 2012; 364 (1): 77-87.
	Cis-regulatory logic driving glial cells missing: self-sustaining circuitry in later embryogenesis., Ransick A., Dev Biol. April 15, 2012; 364 (2): 259-67.
	"Micromere" formation and expression of endomesoderm regulatory genes during embryogenesis of the primitive echinoid Prionocidaris baculosa., Yamazaki A., Dev Growth Differ. June 1, 2012; 54 (5): 566-78.
	Genetics of gene expression responses to temperature stress in a sea urchin gene network., Runcie DE., Mol Ecol. September 1, 2012; 21 (18): 4547-62.
	Sequencing and analysis of the gastrula transcriptome of the brittle star Ophiocoma wendtii., Vaughn R., Evodevo. September 3, 2012; 3 (1): 19.
	The forkhead transcription factor FoxY regulates Nanos., Song JL., Mol Reprod Dev. October 1, 2012; 79 (10): 680-8.
	Autonomy in specification of primordial germ cells and their passive translocation in the sea urchin., Yajima M., Development. October 1, 2012; 139 (20): 3786-94.
	Integration of canonical and noncanonical Wnt signaling pathways patterns the neuroectoderm along the anterior-posterior axis of sea urchin embryos., Range RC., PLoS Biol. January 1, 2013; 11 (1): e1001467.
	Characterization and Endocytic Internalization of Epith-2 Cell Surface Glycoprotein during the Epithelial-to-Mesenchymal Transition in Sea Urchin Embryos., Wakayama N., Front Endocrinol (Lausanne). January 1, 2013; 4 112.
	Differential regulation of disheveled in a novel vegetal cortical domain in sea urchin eggs and embryos: implications for the localized activation of canonical Wnt signaling., Peng CJ., PLoS One. January 1, 2013; 8 (11): e80693.
	FGF signaling induces mesoderm in the hemichordate Saccoglossus kowalevskii., Green SA., Development. March 1, 2013; 140 (5): 1024-33.
	The 3''UTR of nanos2 directs enrichment in the germ cell lineage of the sea urchin., Oulhen N., Dev Biol. May 1, 2013; 377 (1): 275-83.
	Gene regulatory network for neurogenesis in a sea star embryo connects broad neural specification and localized patterning., Yankura KA., Proc Natl Acad Sci U S A. May 21, 2013; 110 (21): 8591-6.
	Retention of exogenous mRNAs selectively in the germ cells of the sea urchin requires only a 5''-cap and a 3''-UTR., Oulhen N., Mol Reprod Dev. July 1, 2013; 80 (7): 561-9.
	A shift in germ layer allocation is correlated with large egg size and facultative planktotrophy in the echinoid Clypeaster rosaceus., Zigler KS., Biol Bull. August 1, 2013; 224 (3): 192-9.
	Towards 3D in silico modeling of the sea urchin embryonic development., Rizzi B., J Chem Biol. September 13, 2013; 7 (1): 17-28.
	Nuclearization of β-catenin in ectodermal precursors confers organizer-like ability to induce endomesoderm and pattern a pluteus larva., Byrum CA., Evodevo. November 4, 2013; 4 (1): 31.

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