Papers associated with germ layer

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	The sea urchin animal pole domain is a Six3-dependent neurogenic patterning center., Wei Z., Development. April 1, 2009; 136 (7): 1179-89.
	Gene regulatory networks for ectoderm specification in sea urchin embryos., Su YH., Biochim Biophys Acta. April 1, 2009; 1789 (4): 261-7.
	Expression patterns of wnt8 orthologs in two sand dollar species with different developmental modes., Nakata H., Gene Expr Patterns. March 1, 2009; 9 (3): 152-7.
	Neural development of the brittlestar Amphiura filiformis., Dupont S., Dev Genes Evol. March 1, 2009; 219 (3): 159-66.
	Nodal signalling is involved in left-right asymmetry in snails., Grande C., Nature. February 19, 2009; 457 (7232): 1007-11.
	Gene regulatory network interactions in sea urchin endomesoderm induction., Sethi AJ., PLoS Biol. February 3, 2009; 7 (2): e1000029.
	Development of nervous systems to metamorphosis in feeding and non-feeding echinoid larvae, the transition from bilateral to radial symmetry., Katow H., Dev Genes Evol. February 1, 2009; 219 (2): 67-77.
	Two ParaHox genes, SpLox and SpCdx, interact to partition the posterior endoderm in the formation of a functional gut., Cole AG., Development. February 1, 2009; 136 (4): 541-9.
	Axial patterning of the pentaradial adult echinoderm body plan., Minsuk SB., Dev Genes Evol. February 1, 2009; 219 (2): 89-101.
	Respecification of ectoderm and altered Nodal expression in sea urchin embryos after cobalt and nickel treatment., Agca C., Mech Dev. January 1, 2009; 126 (5-6): 430-42.
	Genomic control of patterning., Peter IS., Int J Dev Biol. January 1, 2009; 53 (5-6): 707-16.
	Experimentally based sea urchin gene regulatory network and the causal explanation of developmental phenomenology., Ben-Tabou de-Leon S., Wiley Interdiscip Rev Syst Biol Med. January 1, 2009; 1 (2): 237-246.
	Properties of developmental gene regulatory networks., Davidson EH., Proc Natl Acad Sci U S A. December 23, 2008; 105 (51): 20063-6.
	Gene regulatory network subcircuit controlling a dynamic spatial pattern of signaling in the sea urchin embryo., Smith J., Proc Natl Acad Sci U S A. December 23, 2008; 105 (51): 20089-94.
	Exogenous hyalin and sea urchin gastrulation. Part III: biological activity of hyalin isolated from Lytechinus pictus embryos., Contreras A., Zygote. November 1, 2008; 16 (4): 355-61.
	The surprising complexity of the transcriptional regulation of the spdri gene reveals the existence of new linkages inside sea urchin''s PMC and Oral Ectoderm Gene Regulatory Networks., Mahmud AA., Dev Biol. October 15, 2008; 322 (2): 425-34.
	cis-Regulatory sequences driving the expression of the Hbox12 homeobox-containing gene in the presumptive aboral ectoderm territory of the Paracentrotus lividus sea urchin embryo., Cavalieri V., Dev Biol. September 15, 2008; 321 (2): 455-69.
	Specification process of animal plate in the sea urchin embryo., Sasaki H., Dev Growth Differ. September 1, 2008; 50 (7): 595-606.
	LvNumb works synergistically with Notch signaling to specify non-skeletal mesoderm cells in the sea urchin embryo., Range RC., Development. August 1, 2008; 135 (14): 2445-54.
	Lefty acts as an essential modulator of Nodal activity during sea urchin oral-aboral axis formation., Duboc V., Dev Biol. August 1, 2008; 320 (1): 49-59.
	Twist is an essential regulator of the skeletogenic gene regulatory network in the sea urchin embryo., Wu SY., Dev Biol. July 15, 2008; 319 (2): 406-15.
	EGFR signalling is required for Paracentrotus lividus endomesoderm specification., Romancino DP., Arch Biochem Biophys. June 1, 2008; 474 (1): 167-74.
	Expression patterns of three Par-related genes in sea urchin embryos., Shiomi K., Gene Expr Patterns. May 1, 2008; 8 (5): 323-30.
	Embryonic pattern formation without morphogens., Bolouri H., Bioessays. May 1, 2008; 30 (5): 412-7.
	Hydrodynamic simulation of multicellular embryo invagination., Pouille PA., Phys Biol. April 10, 2008; 5 (1): 015005.
	Krüppel-like is required for nonskeletogenic mesoderm specification in the sea urchin embryo., Yamazaki A., Dev Biol. February 15, 2008; 314 (2): 433-42.
	A conserved role for the nodal signaling pathway in the establishment of dorso-ventral and left-right axes in deuterostomes., Duboc V., J Exp Zool B Mol Dev Evol. January 15, 2008; 310 (1): 41-53.
	Muscle formation during embryogenesis of the polychaete Ophryotrocha diadema (Dorvilleidae) - new insights into annelid muscle patterns., Bergter A., Front Zool. January 2, 2008; 5 1.
	Coelomic expression of a novel bone morphogenetic protein in regenerating arms of the brittle star Amphiura filiformis., Bannister R., Dev Genes Evol. January 1, 2008; 218 (1): 33-8.
	FGF signals guide migration of mesenchymal cells, control skeletal morphogenesis [corrected] and regulate gastrulation during sea urchin development., Röttinger E., Development. January 1, 2008; 135 (2): 353-65.
	Development of the nervous system in the brittle star Amphipholis kochii., Hirokawa T., Dev Genes Evol. January 1, 2008; 218 (1): 15-21.
	Co-option and dissociation in larval origins and evolution: the sea urchin larval gut., Love AC., Evol Dev. January 1, 2008; 10 (1): 74-88.
	A Wnt-FoxQ2-nodal pathway links primary and secondary axis specification in sea urchin embryos., Yaguchi S., Dev Cell. January 1, 2008; 14 (1): 97-107.
	Spatio-temporal expression of a Netrin homolog in the sea urchin Hemicentrotus pulcherrimus (HpNetrin) during serotonergic axon extension., Katow H., Int J Dev Biol. January 1, 2008; 52 (8): 1077-88.
	Runx expression is mitogenic and mutually linked to Wnt activity in blastula-stage sea urchin embryos., Robertson AJ., PLoS One. January 1, 2008; 3 (11): e3770.
	Functional analysis of Wnt signaling in the early sea urchin embryo using mRNA microinjection., Bince JM., Methods Mol Biol. January 1, 2008; 469 213-22.
	Compositional genome contexts affect gene expression control in sea urchin embryo., Mahmud AA., PLoS One. January 1, 2008; 3 (12): e4025.
	Evolutionary plasticity of developmental gene regulatory network architecture., Hinman VF., Proc Natl Acad Sci U S A. December 4, 2007; 104 (49): 19404-9.
	Skeletogenesis by transfated secondary mesenchyme cells is dependent on extracellular matrix-ectoderm interactions in Paracentrotus lividus sea urchin embryos., Kiyomoto M., Dev Growth Differ. December 1, 2007; 49 (9): 731-41.
	Ingression of primary mesenchyme cells of the sea urchin embryo: a precisely timed epithelial mesenchymal transition., Wu SY., Birth Defects Res C Embryo Today. December 1, 2007; 81 (4): 241-52.
	Gene regulatory networks and developmental plasticity in the early sea urchin embryo: alternative deployment of the skeletogenic gene regulatory network., Ettensohn CA., Development. September 1, 2007; 134 (17): 3077-87.
	SpGataE, a Strongylocentrotus purpuratus ortholog of mammalian Gata4/5/6: protein expression, interaction with putative target gene spec2a, and identification of friend of Gata factor SpFog1., Kiyama T., Dev Genes Evol. September 1, 2007; 217 (9): 651-63.
	Ontogeny of the holothurian larval nervous system: evolution of larval forms., Bishop CD., Dev Genes Evol. August 1, 2007; 217 (8): 585-92.
	Evolutionary modification of mouth position in deuterostomes., Christiaen L., Semin Cell Dev Biol. August 1, 2007; 18 (4): 502-11.
	A rapid protocol for whole-mount in situ hybridization on Xenopus embryos., Monsoro-Burq AH., CSH Protoc. August 1, 2007; 2007 pdb.prot4809.
	Exclusive developmental functions of gatae cis-regulatory modules in the Strongylocentrorus purpuratus embryo., Lee PY., Dev Biol. July 15, 2007; 307 (2): 434-45.
	Cis-regulatory control of the nodal gene, initiator of the sea urchin oral ectoderm gene network., Nam J., Dev Biol. June 15, 2007; 306 (2): 860-9.
	Analysis of dishevelled localization and function in the early sea urchin embryo., Leonard JD., Dev Biol. June 1, 2007; 306 (1): 50-65.
	Development of nitric oxide synthase-defined neurons in the sea urchin larval ciliary band and evidence for a chemosensory function during metamorphosis., Bishop CD., Dev Dyn. June 1, 2007; 236 (6): 1535-46.
	Localized VEGF signaling from ectoderm to mesenchyme cells controls morphogenesis of the sea urchin embryo skeleton., Duloquin L., Development. June 1, 2007; 134 (12): 2293-302.

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