Papers associated with germ layer

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	Nodal: master and commander of the dorsal-ventral and left-right axes in the sea urchin embryo., Molina MD., Curr Opin Genet Dev. August 1, 2013; 23 (4): 445-53.
	Glutathione transferase theta in apical ciliary tuft regulates mechanical reception and swimming behavior of Sea Urchin Embryos., Jin Y., Cytoskeleton (Hoboken). August 1, 2013; 70 (8): 453-70.
	A shift in germ layer allocation is correlated with large egg size and facultative planktotrophy in the echinoid Clypeaster rosaceus., Zigler KS., Biol Bull. August 1, 2013; 224 (3): 192-9.
	Intact cluster and chordate-like expression of ParaHox genes in a sea star., Annunziata R., BMC Biol. June 27, 2013; 11 68.
	Gene regulatory network for neurogenesis in a sea star embryo connects broad neural specification and localized patterning., Yankura KA., Proc Natl Acad Sci U S A. May 21, 2013; 110 (21): 8591-6.
	Development of the GABA-ergic signaling system and its role in larval swimming in sea urchin., Katow H., J Exp Biol. May 1, 2013; 216 (Pt 9): 1704-16.
	Tissue-specificity and phylogenetics of Pl-MT mRNA during Paracentrotus lividus embryogenesis., Russo R., Gene. May 1, 2013; 519 (2): 305-10.
	Neural development in Eucidaris tribuloides and the evolutionary history of the echinoid larval nervous system., Bishop CD., Dev Biol. May 1, 2013; 377 (1): 236-44.
	Diversification of oral and aboral mesodermal regulatory states in pregastrular sea urchin embryos., Materna SC., Dev Biol. March 1, 2013; 375 (1): 92-104.
	FGF signaling induces mesoderm in the hemichordate Saccoglossus kowalevskii., Green SA., Development. March 1, 2013; 140 (5): 1024-33.
	Gene regulatory control in the sea urchin aboral ectoderm: spatial initiation, signaling inputs, and cell fate lockdown., Ben-Tabou de-Leon S., Dev Biol. February 1, 2013; 374 (1): 245-54.
	Integration of canonical and noncanonical Wnt signaling pathways patterns the neuroectoderm along the anterior-posterior axis of sea urchin embryos., Range RC., PLoS Biol. January 1, 2013; 11 (1): e1001467.
	Brachyury, Tbx2/3 and sall expression during embryogenesis of the indirectly developing polychaete Hydroides elegans., Arenas-Mena C., Int J Dev Biol. January 1, 2013; 57 (1): 73-83.
	Unc-5/netrin-mediated axonal projection during larval serotonergic nervous system formation in the sea urchin, Hemicentrotus pulcherrimus., Abe K., Int J Dev Biol. January 1, 2013; 57 (5): 415-25.
	Differential regulation of disheveled in a novel vegetal cortical domain in sea urchin eggs and embryos: implications for the localized activation of canonical Wnt signaling., Peng CJ., PLoS One. January 1, 2013; 8 (11): e80693.
	Early development of coelomic structures in an echinoderm larva and a similarity with coelomic structures in a chordate embryo., Morris VB., Dev Genes Evol. November 1, 2012; 222 (6): 313-23.
	The forkhead transcription factor FoxY regulates Nanos., Song JL., Mol Reprod Dev. October 1, 2012; 79 (10): 680-8.
	Direct and indirect control of oral ectoderm regulatory gene expression by Nodal signaling in the sea urchin embryo., Li E., Dev Biol. September 15, 2012; 369 (2): 377-85.
	Sequencing and analysis of the gastrula transcriptome of the brittle star Ophiocoma wendtii., Vaughn R., Evodevo. September 3, 2012; 3 (1): 19.
	Genetics of gene expression responses to temperature stress in a sea urchin gene network., Runcie DE., Mol Ecol. September 1, 2012; 21 (18): 4547-62.
	Par6 regulates skeletogenesis and gut differentiation in sea urchin larvae., Shiomi K., Dev Genes Evol. September 1, 2012; 222 (5): 269-78.
	Development of an embryonic skeletogenic mesenchyme lineage in a sea cucumber reveals the trajectory of change for the evolution of novel structures in echinoderms., McCauley BS., Evodevo. August 9, 2012; 3 (1): 17.
	"Micromere" formation and expression of endomesoderm regulatory genes during embryogenesis of the primitive echinoid Prionocidaris baculosa., Yamazaki A., Dev Growth Differ. June 1, 2012; 54 (5): 566-78.
	The sea urchin, Paracentrotus lividus, as a model to investigate the onset of molecules immunologically related to the α-7 subunit of nicotinic receptors during embryonic and larval development., Aluigi MG., Curr Drug Targets. May 1, 2012; 13 (5): 587-93.
	Axial patterning interactions in the sea urchin embryo: suppression of nodal by Wnt1 signaling., Wei Z., Development. May 1, 2012; 139 (9): 1662-9.
	Cis-regulatory logic driving glial cells missing: self-sustaining circuitry in later embryogenesis., Ransick A., Dev Biol. April 15, 2012; 364 (2): 259-67.
	A comprehensive analysis of Delta signaling in pre-gastrular sea urchin embryos., Materna SC., Dev Biol. April 1, 2012; 364 (1): 77-87.
	Zinc finger homeobox is required for the differentiation of serotonergic neurons in the sea urchin embryo., Yaguchi J., Dev Biol. March 1, 2012; 363 (1): 74-83.
	Sequential signaling crosstalk regulates endomesoderm segregation in sea urchin embryos., Sethi AJ., Science. February 3, 2012; 335 (6068): 590-3.
	Select microRNAs are essential for early development in the sea urchin., Song JL., Dev Biol. February 1, 2012; 362 (1): 104-13.
	Frizzled1/2/7 signaling directs β-catenin nuclearisation and initiates endoderm specification in macromeres during sea urchin embryogenesis., Lhomond G., Development. February 1, 2012; 139 (4): 816-25.
	Synthetic in vivo validation of gene network circuitry., Damle SS., Proc Natl Acad Sci U S A. January 31, 2012; 109 (5): 1548-53.
	Heterochronic activation of VEGF signaling and the evolution of the skeleton in echinoderm pluteus larvae., Morino Y., Evol Dev. January 1, 2012; 14 (5): 428-36.
	Opposing nodal and BMP signals regulate left-right asymmetry in the sea urchin larva., Luo YJ., PLoS Biol. January 1, 2012; 10 (10): e1001402.
	Left-right asymmetry in the sea urchin embryo: BMP and the asymmetrical origins of the adult., Warner JF., PLoS Biol. January 1, 2012; 10 (10): e1001404.
	The protease degrading sperm histones post-fertilization in sea urchin eggs is a nuclear cathepsin L that is further required for embryo development., Morin V., PLoS One. January 1, 2012; 7 (11): e46850.
	Reciprocal signaling between the ectoderm and a mesendodermal left-right organizer directs left-right determination in the sea urchin embryo., Bessodes N., PLoS Genet. January 1, 2012; 8 (12): e1003121.
	Morphogenesis in sea urchin embryos: linking cellular events to gene regulatory network states., Lyons DC., Wiley Interdiscip Rev Dev Biol. January 1, 2012; 1 (2): 231-52.
	Stress response induced by carbon nanoparticles in Paracentrotus lividus., Carata E., Int J Mol Cell Med. January 1, 2012; 1 (1): 30-8.
	Fez function is required to maintain the size of the animal plate in the sea urchin embryo., Yaguchi S., Development. October 1, 2011; 138 (19): 4233-43.
	Specific expression of a TRIM-containing factor in ectoderm cells affects the skeletal morphogenetic program of the sea urchin embryo., Cavalieri V., Development. October 1, 2011; 138 (19): 4279-90.
	High-resolution, three-dimensional mapping of gene expression using GeneExpressMap (GEM)., Flynn CJ., Dev Biol. September 15, 2011; 357 (2): 532-40.
	Maternal Oct1/2 is required for Nodal and Vg1/Univin expression during dorsal-ventral axis specification in the sea urchin embryo., Range R., Dev Biol. September 15, 2011; 357 (2): 440-9.
	The conserved role and divergent regulation of foxa, a pan-eumetazoan developmental regulatory gene., de-Leon SB., Dev Biol. September 1, 2011; 357 (1): 21-6.
	Manganese interferes with calcium, perturbs ERK signaling, and produces embryos with no skeleton., Pinsino A., Toxicol Sci. September 1, 2011; 123 (1): 217-30.
	The evolution of nervous system patterning: insights from sea urchin development., Angerer LM., Development. September 1, 2011; 138 (17): 3613-23.
	Wnt6 activates endoderm in the sea urchin gene regulatory network., Croce J., Development. August 1, 2011; 138 (15): 3297-306.
	Atypical protein kinase C controls sea urchin ciliogenesis., Prulière G., Mol Biol Cell. June 15, 2011; 22 (12): 2042-53.
	Ventralization of an indirect developing hemichordate by NiCl₂ suggests a conserved mechanism of dorso-ventral (D/V) patterning in Ambulacraria (hemichordates and echinoderms)., Röttinger E., Dev Biol. June 1, 2011; 354 (1): 173-90.
	Regulative deployment of the skeletogenic gene regulatory network during sea urchin development., Sharma T., Development. June 1, 2011; 138 (12): 2581-90.

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