Papers associated with dorsal ectoderm

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	Larval ectoderm, organizational homology, and the origins of evolutionary novelty., Love AC., J Exp Zool B Mol Dev Evol. January 15, 2006; 306 (1): 18-34.
	A global view of gene expression in lithium and zinc treated sea urchin embryos: new components of gene regulatory networks., Poustka AJ., Genome Biol. January 1, 2007; 8 (5): R85.
	Sp-Smad2/3 mediates patterning of neurogenic ectoderm by nodal in the sea urchin embryo., Yaguchi S., Dev Biol. February 15, 2007; 302 (2): 494-503.
	SpGataE, a Strongylocentrotus purpuratus ortholog of mammalian Gata4/5/6: protein expression, interaction with putative target gene spec2a, and identification of friend of Gata factor SpFog1., Kiyama T., Dev Genes Evol. September 1, 2007; 217 (9): 651-63.
	Spatio-temporal expression of a Netrin homolog in the sea urchin Hemicentrotus pulcherrimus (HpNetrin) during serotonergic axon extension., Katow H., Int J Dev Biol. January 1, 2008; 52 (8): 1077-88.
	Compositional genome contexts affect gene expression control in sea urchin embryo., Mahmud AA., PLoS One. January 1, 2008; 3 (12): e4025.
	Lefty acts as an essential modulator of Nodal activity during sea urchin oral-aboral axis formation., Duboc V., Dev Biol. August 1, 2008; 320 (1): 49-59.
	cis-Regulatory sequences driving the expression of the Hbox12 homeobox-containing gene in the presumptive aboral ectoderm territory of the Paracentrotus lividus sea urchin embryo., Cavalieri V., Dev Biol. September 15, 2008; 321 (2): 455-69.
	Neural development of the brittlestar Amphiura filiformis., Dupont S., Dev Genes Evol. March 1, 2009; 219 (3): 159-66.
	A perturbation model of the gene regulatory network for oral and aboral ectoderm specification in the sea urchin embryo., Su YH., Dev Biol. May 15, 2009; 329 (2): 410-21.
	Reduced O2 and elevated ROS in sea urchin embryos leads to defects in ectoderm differentiation., Agca C., Dev Dyn. July 1, 2009; 238 (7): 1777-87.
	Patterning of the dorsal-ventral axis in echinoderms: insights into the evolution of the BMP-chordin signaling network., Lapraz F., PLoS Biol. November 1, 2009; 7 (11): e1000248.
	Spatiotemporal expression pattern of an encephalopsin orthologue of the sea urchin Hemicentrotus pulcherrimus during early development, and its potential role in larval vertical migration., Ooka S., Dev Growth Differ. February 1, 2010; 52 (2): 195-207.
	TGFβ signaling positions the ciliary band and patterns neurons in the sea urchin embryo., Yaguchi S., Dev Biol. November 1, 2010; 347 (1): 71-81.
	Uncoupling of complex regulatory patterning during evolution of larval development in echinoderms., Yankura KA., BMC Biol. November 30, 2010; 8 143.
	Ancestral regulatory circuits governing ectoderm patterning downstream of Nodal and BMP2/4 revealed by gene regulatory network analysis in an echinoderm., Saudemont A., PLoS Genet. December 23, 2010; 6 (12): e1001259.
	The dynamic gene expression patterns of transcription factors constituting the sea urchin aboral ectoderm gene regulatory network., Chen JH., Dev Dyn. January 1, 2011; 240 (1): 250-60.
	Ventralization of an indirect developing hemichordate by NiCl₂ suggests a conserved mechanism of dorso-ventral (D/V) patterning in Ambulacraria (hemichordates and echinoderms)., Röttinger E., Dev Biol. June 1, 2011; 354 (1): 173-90.
	Direct and indirect control of oral ectoderm regulatory gene expression by Nodal signaling in the sea urchin embryo., Li E., Dev Biol. September 15, 2012; 369 (2): 377-85.
	Unc-5/netrin-mediated axonal projection during larval serotonergic nervous system formation in the sea urchin, Hemicentrotus pulcherrimus., Abe K., Int J Dev Biol. January 1, 2013; 57 (5): 415-25.
	Gene regulatory control in the sea urchin aboral ectoderm: spatial initiation, signaling inputs, and cell fate lockdown., Ben-Tabou de-Leon S., Dev Biol. February 1, 2013; 374 (1): 245-54.
	Cis-regulatory control of the nuclear receptor Coup-TF gene in the sea urchin Paracentrotus lividus embryo., Kalampoki LG., PLoS One. January 1, 2014; 9 (11): e109274.
	Early asymmetric cues triggering the dorsal/ventral gene regulatory network of the sea urchin embryo., Cavalieri V., Elife. December 2, 2014; 3 e04664.
	A computational model for BMP movement in sea urchin embryos., van Heijster P., J Theor Biol. December 21, 2014; 363 277-89.
	Molecular characterization of the apical organ of the anthozoan Nematostella vectensis., Sinigaglia C., Dev Biol. February 1, 2015; 398 (1): 120-33.
	Geometric control of ciliated band regulatory states in the sea urchin embryo., Barsi JC., Development. March 1, 2015; 142 (5): 953-61.
	Expession patterns of mesenchyme specification genes in two distantly related echinoids, Glyptocidaris crenularis and Echinocardium cordatum., Yamazaki A., Gene Expr Patterns. March 1, 2015; 17 (2): 87-97.
	Comparative Study of Regulatory Circuits in Two Sea Urchin Species Reveals Tight Control of Timing and High Conservation of Expression Dynamics., Gildor T., PLoS Genet. July 31, 2015; 11 (7): e1005435.
	The Maternal Maverick/GDF15-like TGF-β Ligand Panda Directs Dorsal-Ventral Axis Formation by Restricting Nodal Expression in the Sea Urchin Embryo., Haillot E., PLoS Biol. September 9, 2015; 13 (9): e1002247.
	A deuterostome origin of the Spemann organiser suggested by Nodal and ADMPs functions in Echinoderms., Lapraz F., Nat Commun. October 1, 2015; 6 8434.
	cis-Regulatory control of the initial neurogenic pattern of onecut gene expression in the sea urchin embryo., Barsi JC., Dev Biol. January 1, 2016; 409 (1): 310-318.
	Robustness and Accuracy in Sea Urchin Developmental Gene Regulatory Networks., Ben-Tabou de-Leon S., Front Genet. January 1, 2016; 7 16.
	Immunohistochemical and ultrastructural properties of the larval ciliary band-associated strand in the sea urchin Hemicentrotus pulcherrimus., Katow H., Front Zool. January 1, 2016; 13 27.
	Expression of GATA and POU transcription factors during the development of the planktotrophic trochophore of the polychaete serpulid Hydroides elegans., Wong KS., Evol Dev. July 1, 2016; 18 (4): 254-66.
	Eph and Ephrin function in dispersal and epithelial insertion of pigmented immunocytes in sea urchin embryos., Krupke OA., Elife. July 30, 2016; 5
	Perturbation of gut bacteria induces a coordinated cellular immune response in the purple sea urchin larva., Ch Ho E., Immunol Cell Biol. October 1, 2016; 94 (9): 861-874.
	Evolutionary recruitment of flexible Esrp-dependent splicing programs into diverse embryonic morphogenetic processes., Burguera D., Nat Commun. November 27, 2017; 8 (1): 1799.
	Notch-mediated lateral inhibition is an evolutionarily conserved mechanism patterning the ectoderm in echinoids., Erkenbrack EM., Dev Genes Evol. January 1, 2018; 228 (1): 1-11.
	Neuropeptidergic Systems in Pluteus Larvae of the Sea Urchin Strongylocentrotus purpuratus: Neurochemical Complexity in a "Simple" Nervous System., Wood NJ., Front Endocrinol (Lausanne). January 1, 2018; 9 628.
	SoxB2 in sea urchin development: implications in neurogenesis, ciliogenesis and skeletal patterning., Anishchenko E., Evodevo. January 22, 2018; 9 5.
	Coup-TF: A maternal factor essential for differentiation along the embryonic axes in the sea urchin Paracentrotus lividus., Tsironis I., Dev Biol. July 1, 2021; 475 131-144.

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